FC928204
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC928204 vs. ExPASy Swiss-Prot
Match: RAB8A_DICDI (Ras-related protein Rab-8A OS=Dictyostelium discoideum GN=rab8A PE=3 SV=1) HSP 1 Score: 107.842 bits (268), Expect = 4.123e-23 Identity = 58/153 (37.91%), Postives = 91/153 (59.48%), Query Frame = 1 Query: 127 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETLCK 585 L+K++++GDSGVGK+ L+ ++ F+ + TIG DF + ++ E + LQIWDTAGQERF+++ A+YRGA +LVYDV KSF N+ NW A+ D+ +++GNK D+ +VV + ++ A + I + ET K Sbjct: 15 LIKLLLIGDSGVGKSCLLLRFSEDSFTPSFITTIGIDFKIRTIELEGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDEKSFGNIRNWIRNIEQHAT----DSVNKMLIGNKCDM--AEKKVVDSSRGKS-LADEYGIKFLETSAK 160
BLAST of FC928204 vs. ExPASy Swiss-Prot
Match: RAB32_MOUSE (Ras-related protein Rab-32 OS=Mus musculus GN=Rab32 PE=2 SV=3) HSP 1 Score: 107.842 bits (268), Expect = 4.123e-23 Identity = 58/160 (36.25%), Postives = 91/160 (56.88%), Query Frame = 1 Query: 109 PSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDR-LFTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETLCK 585 P R L KV+++G+ GVGKTS++ +YV++ FS Y+ATIG DF K + ++ R L LQ+WD AGQERF ++ +Y+ A +V+D++ +FD + W+ + + + P V+L NK D NS+ S + +C G +FET K Sbjct: 17 PETREHLFKVLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALKVLNWDSRTLVRLQLWDIAGQERFGNMTRVYYKEALGAFVVFDISRSSTFDAVLKWKNDLDSKVHLPNGSPIPAVLLANKCDQKKDNSQ--SPSQMDQFCKDHGFTGWFETSAK 174
BLAST of FC928204 vs. ExPASy Swiss-Prot
Match: RAB1D_DICDI (Ras-related protein Rab-1D OS=Dictyostelium discoideum GN=rab1D PE=1 SV=1) HSP 1 Score: 107.842 bits (268), Expect = 4.123e-23 Identity = 57/151 (37.75%), Postives = 92/151 (60.93%), Query Frame = 1 Query: 133 KVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETLCK 585 K++++GDSGVGK+ L+ ++ + +++ + +TIG DF K + + + LQIWDTAGQERF+++ ++YRGA +LVYD SF N+ W E A +N +++GNK D+ N +VV +A+++ S G IP+ ET K Sbjct: 12 KILLIGDSGVGKSCLLLRFADDSWTDTHISTIGVDFKIKTLNLDGKTIKLQIWDTAGQERFRTITSSYYRGAQGIILVYDCTDQDSFTNVKQWMGEIDRYAC----ENVNKLLVGNKTDL--VNEKVVDSNQAKSFAESYG-IPFIETSAK 155
BLAST of FC928204 vs. ExPASy Swiss-Prot
Match: RB22A_MOUSE (Ras-related protein Rab-22A OS=Mus musculus GN=Rab22a PE=1 SV=2) HSP 1 Score: 107.457 bits (267), Expect = 5.384e-23 Identity = 56/140 (40.00%), Postives = 82/140 (58.57%), Query Frame = 1 Query: 130 LKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKIDVDGGNSRVVSEKKARAWCAS 549 LKV +LGD+GVGK+S++ ++V F TIGA F+TK VQ+++ L IWDTAGQERF++L +YRG+ ++VYD+ ++F L NW E PS + GNK D+ + R V E+ A+ + S Sbjct: 6 LKVCLLGDTGVGKSSIVWRFVEDSFDPNINPTIGASFMTKTVQYQNELHKFLIWDTAGQERFRALAPMYYRGSAAAIIVYDITKEETFSTLKNWVRELRQHGPPS----IVVAIAGNKCDLT--DVREVMERDAKDYADS 139
BLAST of FC928204 vs. ExPASy Swiss-Prot
Match: RAB1C_HUMAN (Putative Ras-related protein Rab-1C OS=Homo sapiens GN=RAB1C PE=5 SV=2) HSP 1 Score: 107.457 bits (267), Expect = 5.384e-23 Identity = 57/153 (37.25%), Postives = 93/153 (60.78%), Query Frame = 1 Query: 127 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETLCK 585 L K++++GDSGVGK+ L+ ++ + ++ Y +TIG DF + ++ + + LQIWDTAGQERF ++ ++YRGA ++VYDV +S+ N+ W +E AS +N +++GNK D+ +VV A+ + S G IP+ ET K Sbjct: 8 LFKLLLIGDSGVGKSCLLLRFADDPYTESYISTIGVDFKIQTIELDGKTIKLQIWDTAGQERFWTITSSYYRGAHGFLVVYDVTDQESYANVKQWLQEIDRHAS----ENVNKLLVGNKSDLT--TKKVVDNTTAKEFADSLG-IPFLETSAK 153
BLAST of FC928204 vs. ExPASy Swiss-Prot
Match: RAB10_CHICK (Ras-related protein Rab-10 OS=Gallus gallus GN=RAB10 PE=2 SV=1) HSP 1 Score: 107.457 bits (267), Expect = 5.384e-23 Identity = 58/153 (37.91%), Postives = 94/153 (61.44%), Query Frame = 1 Query: 127 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETLCK 585 L K++++GDSGVGKT ++ ++ + F+ + +TIG D K V+ + + LQIWDTAGQERF ++ ++YRGA +LVYD+ + KSF+N++ W A+ ++ ++LGNK D++ + RVV + K A + I +FET K Sbjct: 9 LFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDLKIKTVELQGKKIKLQIWDTAGQERFHTITTSYYRGAMGIMLVYDITNAKSFENISKWLRNIDEHAN----EDVERMLLGNKCDME--DKRVVPKAKGEQ-IAREHGIRFFETSAK 154
BLAST of FC928204 vs. ExPASy Swiss-Prot
Match: YPT6_YEAST (GTP-binding protein YPT6 OS=Saccharomyces cerevisiae GN=YPT6 PE=1 SV=1) HSP 1 Score: 107.071 bits (266), Expect = 7.032e-23 Identity = 54/139 (38.85%), Postives = 85/139 (61.15%), Query Frame = 1 Query: 124 TLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKIDVDGGN--SRVVSEKKAR 534 T K++ LG+ GVGKTSL+ +++ F + Y+ATIG DFL+K + +D+ LQ+WDTAGQERF+SL ++ R + ++VYD+ KSF+ ++ W E+ + +N ++GNK D+ S EKKA+ Sbjct: 9 TKYKIVFLGEQGVGKTSLITRFMYDTFDDHYQATIGIDFLSKTMYLDDKTIRLQLWDTAGQERFRSLIPSYIRDSRVAIIVYDITKRKSFEYIDKWIEDV---KNERGDENVILCIVGNKSDLSDERQISTEEGEKKAK 144
BLAST of FC928204 vs. ExPASy Swiss-Prot
Match: YPT31_YEAST (GTP-binding protein YPT31/YPT8 OS=Saccharomyces cerevisiae GN=YPT31 PE=1 SV=3) HSP 1 Score: 107.071 bits (266), Expect = 7.032e-23 Identity = 52/150 (34.67%), Postives = 95/150 (63.33%), Query Frame = 1 Query: 127 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFET 576 L K++++GDSGVGK++L++++ +F+ K+TIG +F T+ ++ + + QIWDTAGQER++++ A+YRGA ++VYD++ S++N N+W E A DN ++GNK D+ + R V ++++ + A + + + ET Sbjct: 13 LFKIVLIGDSGVGKSNLLSRFTKNEFNMDSKSTIGVEFATRTLEIDGKRIKAQIWDTAGQERYRAITSAYYRGAVGALIVYDISKSSSYENCNHWLSELRENAD----DNVAVGLIGNKSDL--AHLRAVPTEESKTF-AQENQLLFTET 155
BLAST of FC928204 vs. ExPASy Swiss-Prot
Match: YPT1_NEUCR (GTP-binding protein ypt1 OS=Neurospora crassa GN=ypt-1 PE=3 SV=1) HSP 1 Score: 107.071 bits (266), Expect = 7.032e-23 Identity = 57/153 (37.25%), Postives = 94/153 (61.44%), Query Frame = 1 Query: 127 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETLCK 585 L K++++GDSGVGK+ L+ ++ + ++ Y +TIG DF + ++ + + LQIWDTAGQERF+++ ++YRGA +VYDV M SF+N+ W +E A+ + +++GNK D+ + +VV A+ + S G IP+ ET K Sbjct: 8 LFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTVKLQIWDTAGQERFRTITSSYYRGAHGICVVYDVTDMDSFNNVKQWLQEIDRYAT----EGVNKLLVGNKSDMT--DKKVVEYTVAKEFADSLG-IPFLETSAK 153
BLAST of FC928204 vs. ExPASy Swiss-Prot
Match: RAB7L_PONAB (Ras-related protein Rab-7L1 OS=Pongo abelii GN=RAB7L1 PE=2 SV=1) HSP 1 Score: 107.071 bits (266), Expect = 7.032e-23 Identity = 50/126 (39.68%), Postives = 79/126 (62.70%), Query Frame = 1 Query: 118 RRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFED-RLFTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKIDV 492 R L KV+++GD+ VGKTSL+ +Y FS YK+T+G DF K +Q+ D + LQ+WD AGQERF S+ +YR A CV+++DV + +F N W+++ + + + + P ++L NK D+ Sbjct: 4 RDHLFKVLVVGDAAVGKTSLVQRYSQDSFSKHYKSTVGVDFALKVLQWSDYEIVRLQLWDIAGQERFTSMTRLYYRDASACVIMFDVTNATTFSNSQRWKQDLDSKLTLPNGEPVPCLLLANKCDL 129 The following BLAST results are available for this feature:
BLAST of FC928204 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC928204 ID=FC928204; Name=FC928204; organism=Citrus clementina; type=EST; length=595bpback to top |