FC928204
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC928204 vs. ExPASy Swiss-Prot
Match: YPT7_YEAST (GTP-binding protein YPT7 OS=Saccharomyces cerevisiae GN=YPT7 PE=1 SV=1) HSP 1 Score: 214.542 bits (545), Expect = 3.128e-55 Identity = 104/161 (64.60%), Postives = 131/161 (81.37%), Query Frame = 1 Query: 106 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFE-DRLFTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETLCK 585 M SR++ +LKVIILGDSGVGKTSLM++YVN K+S QYKATIGADFLTKEV + D++ T+Q+WDTAGQERFQSLGVAFYRGADCCVLVYDV + SF+N+ +WR+EFL+ A+ + P+ FPFV+LGNKID + + ++VSEK A+ S G+IP F T K Sbjct: 1 MSSRKKNILKVIILGDSGVGKTSLMHRYVNDKYSQQYKATIGADFLTKEVTVDGDKVATMQVWDTAGQERFQSLGVAFYRGADCCVLVYDVTNASSFENIKSWRDEFLVHANVNSPETFPFVILGNKIDAE-ESKKIVSEKSAQELAKSLGDIPLFLTSAK 160
BLAST of FC928204 vs. ExPASy Swiss-Prot
Match: YPT71_SCHPO (GTP-binding protein ypt71 OS=Schizosaccharomyces pombe GN=ypt71 PE=2 SV=1) HSP 1 Score: 203.371 bits (516), Expect = 7.210e-52 Identity = 101/162 (62.35%), Postives = 128/162 (79.01%), Query Frame = 1 Query: 106 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKIDVDGGNSRVVSEKKARAWCASK--GNIPYFETLCK 585 M +++R LKV+ILGDSGVGKT LMNQ+VN+KFS +YKATIGADFLTK+V +D+L TLQ+WDTAGQERFQSLG+AFYRGADCCV+VY+VN+ KSFD++ NWR+EFL Q S D FPF+++GN+ID D + R VS +A +C SK N+ +FE K Sbjct: 1 MSAQKRVFLKVVILGDSGVGKTCLMNQFVNQKFSREYKATIGADFLTKDVVVDDKLVTLQLWDTAGQERFQSLGMAFYRGADCCVIVYNVNNSKSFDSVENWRQEFLYQTS-QDECAFPFIIVGNQIDKD-ASKRAVSLHRALDYCKSKHGSNMIHFEASAK 160
BLAST of FC928204 vs. ExPASy Swiss-Prot
Match: RAB9B_MOUSE (Ras-related protein Rab-9B OS=Mus musculus GN=Rab9b PE=2 SV=1) HSP 1 Score: 187.963 bits (476), Expect = 3.135e-47 Identity = 88/158 (55.70%), Postives = 115/158 (72.78%), Query Frame = 1 Query: 112 SRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETLCK 585 S + LLKVI+LGD GVGK+SLMN+YV KF +Q TIG +FL ++++ + R TLQIWDTAGQERF+SL FYRGADCC+L + V+ +SF+NL NW++EF+ A DPD+FPFVVLGNK+D + R V+ ++A+AWC GN PY ET K Sbjct: 2 SGKSLLLKVILLGDGGVGKSSLMNRYVTNKFDSQAFHTIGVEFLNRDLEVDGRFVTLQIWDTAGQERFKSLRTPFYRGADCCLLTFSVDDRQSFENLGNWQKEFIYYADVKDPDHFPFVVLGNKVDKE---DRQVTTEEAQAWCMENGNYPYLETSAK 156
BLAST of FC928204 vs. ExPASy Swiss-Prot
Match: RAB9B_PONAB (Ras-related protein Rab-9B OS=Pongo abelii GN=RAB9B PE=2 SV=1) HSP 1 Score: 184.496 bits (467), Expect = 3.466e-46 Identity = 86/158 (54.43%), Postives = 115/158 (72.78%), Query Frame = 1 Query: 112 SRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETLCK 585 S + LLKVI+LGD GVGK+SLMN+YV KF +Q TIG +FL ++++ + R TLQIWDTAGQERF+SL FYRGADCC+L + V+ +SF+NL NW++EF+ A DP++FPFVVLGNK+D + R V+ ++A+AWC G+ PY ET K Sbjct: 2 SGKSLLLKVILLGDGGVGKSSLMNRYVTNKFDSQAFHTIGVEFLNRDLEVDGRFVTLQIWDTAGQERFKSLRTPFYRGADCCLLTFSVDDRQSFENLGNWQKEFIYYADVKDPEHFPFVVLGNKVDKE---DRQVTTEEAQAWCMENGDYPYLETSAK 156
BLAST of FC928204 vs. ExPASy Swiss-Prot
Match: RAB9A_HUMAN (Ras-related protein Rab-9A OS=Homo sapiens GN=RAB9A PE=1 SV=1) HSP 1 Score: 183.726 bits (465), Expect = 5.912e-46 Identity = 83/156 (53.21%), Postives = 114/156 (73.08%), Query Frame = 1 Query: 118 RRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETLCK 585 + +L KVI+LGD GVGK+SLMN+YV KF Q TIG +FL K+++ + T+QIWDTAGQERF+SL FYRG+DCC+L + V+ +SF NL+NW++EF+ A +P++FPFV+LGNKID+ + R VS ++A+AWC G+ PYFET K Sbjct: 4 KSSLFKVILLGDGGVGKSSLMNRYVTNKFDTQLFHTIGVEFLNKDLEVDGHFVTMQIWDTAGQERFRSLRTPFYRGSDCCLLTFSVDDSQSFQNLSNWKKEFIYYADVKEPESFPFVILGNKIDI---SERQVSTEEAQAWCRDNGDYPYFETSAK 156
BLAST of FC928204 vs. ExPASy Swiss-Prot
Match: RAB9A_CANFA (Ras-related protein Rab-9A OS=Canis familiaris GN=RAB9A PE=1 SV=2) HSP 1 Score: 183.726 bits (465), Expect = 5.912e-46 Identity = 83/156 (53.21%), Postives = 114/156 (73.08%), Query Frame = 1 Query: 118 RRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETLCK 585 + +L KVI+LGD GVGK+SLMN+YV KF Q TIG +FL K+++ + T+QIWDTAGQERF+SL FYRG+DCC+L + V+ +SF NL+NW++EF+ A +P++FPFV+LGNKID+ + R VS ++A+AWC G+ PYFET K Sbjct: 4 KSSLFKVILLGDGGVGKSSLMNRYVTNKFDTQLFHTIGVEFLNKDLEVDGHFVTMQIWDTAGQERFRSLRTPFYRGSDCCLLTFSVDDSQSFQNLSNWKKEFIYYADVKEPESFPFVILGNKIDI---SERQVSTEEAQAWCRDNGDYPYFETSAK 156
BLAST of FC928204 vs. ExPASy Swiss-Prot
Match: RAB9B_HUMAN (Ras-related protein Rab-9B OS=Homo sapiens GN=RAB9B PE=1 SV=1) HSP 1 Score: 182.956 bits (463), Expect = 1.008e-45 Identity = 85/158 (53.80%), Postives = 114/158 (72.15%), Query Frame = 1 Query: 112 SRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETLCK 585 S + LLKVI+LGD GVGK+SLMN+YV KF +Q TIG +FL ++++ + R TLQIWDTAGQERF+SL FYRGADCC+L + V+ +SF+NL NW++EF+ A DP++FPFVVLGNK+D + R V+ ++A+ WC G+ PY ET K Sbjct: 2 SGKSLLLKVILLGDGGVGKSSLMNRYVTNKFDSQAFHTIGVEFLNRDLEVDGRFVTLQIWDTAGQERFKSLRTPFYRGADCCLLTFSVDDRQSFENLGNWQKEFIYYADVKDPEHFPFVVLGNKVDKE---DRQVTTEEAQTWCMENGDYPYLETSAK 156
BLAST of FC928204 vs. ExPASy Swiss-Prot
Match: RAB9A_RAT (Ras-related protein Rab-9A OS=Rattus norvegicus GN=Rab9a PE=2 SV=2) HSP 1 Score: 181.415 bits (459), Expect = 2.934e-45 Identity = 81/156 (51.92%), Postives = 113/156 (72.44%), Query Frame = 1 Query: 118 RRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETLCK 585 + +L K+I+LGD GVGK+SLMN+YV KF +Q TIG +FL K+++ + T+QIWDTAGQERF+SL FYRG+DCC+L + V+ +SF NL+NW++EF+ A +P++FPFV+LGNK D+ R VS ++A+AWC G+ PYFET K Sbjct: 4 KSSLFKIILLGDGGVGKSSLMNRYVTNKFDSQLFHTIGVEFLNKDLEVDGHFVTMQIWDTAGQERFRSLRTPFYRGSDCCLLTFSVDDSQSFQNLSNWKKEFIYYADVKEPESFPFVILGNKTDI---KERQVSTEEAQAWCKDNGDYPYFETSAK 156
BLAST of FC928204 vs. ExPASy Swiss-Prot
Match: RAB9A_MOUSE (Ras-related protein Rab-9A OS=Mus musculus GN=Rab9a PE=1 SV=1) HSP 1 Score: 181.415 bits (459), Expect = 2.934e-45 Identity = 81/156 (51.92%), Postives = 113/156 (72.44%), Query Frame = 1 Query: 118 RRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETLCK 585 + +L K+I+LGD GVGK+SLMN+YV KF +Q TIG +FL K+++ + T+QIWDTAGQERF+SL FYRG+DCC+L + V+ +SF NL+NW++EF+ A +P++FPFV+LGNK D+ R VS ++A+AWC G+ PYFET K Sbjct: 4 KSSLFKIILLGDGGVGKSSLMNRYVTNKFDSQLFHTIGVEFLNKDLEVDGHFVTMQIWDTAGQERFRSLRTPFYRGSDCCLLTFSVDDSQSFQNLSNWKKEFIYYADVKEPESFPFVILGNKTDI---KERQVSTEEAQAWCKDNGDYPYFETSAK 156
BLAST of FC928204 vs. ExPASy Swiss-Prot
Match: RAB7B_DICDI (Ras-related protein Rab-7B OS=Dictyostelium discoideum GN=rab7B PE=3 SV=1) HSP 1 Score: 148.288 bits (373), Expect = 2.753e-35 Identity = 74/160 (46.25%), Postives = 109/160 (68.12%), Query Frame = 1 Query: 112 SRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKIDVDGGNSRVVSEKKARAWCASK--GNIPYFETLCK 585 ++ R ++KV+I+G+ VGKTS++ +YV+K+F K TIG DF V + + TLQ+WDT+GQERF+SL +++YRGAD C+LV+DV + K+ +L WR++F+ + DP FPF++LGNKID +RVV+EK A WC GN+ YF+T K Sbjct: 2 TKGRKIIKVVIIGEKSVGKTSILRRYVDKRFVT-LKPTIGVDF----VMVSENMVTLQLWDTSGQERFRSLEISYYRGADYCILVFDVTNEKTLYDLKLWRDDFIEKTEIRDPILFPFIILGNKID---DPNRVVTEKAAIQWCKDNIGGNLTYFDTSAK 153 The following BLAST results are available for this feature:
BLAST of FC928204 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC928204 ID=FC928204; Name=FC928204; organism=Citrus clementina; type=EST; length=595bpback to top |