FC928204
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC928204 vs. ExPASy Swiss-Prot
Match: RAB7B_BOVIN (Ras-related protein Rab-7b OS=Bos taurus GN=RAB7B PE=2 SV=1) HSP 1 Score: 146.747 bits (369), Expect = 8.009e-35 Identity = 75/160 (46.88%), Postives = 105/160 (65.62%), Query Frame = 1 Query: 106 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETLCK 585 M R++ LK+II+G GVGKTSL+++YV+K F Y+ T+GA L+K + ED LQIWDT GQERF+S+ FY+G+D CVL +DV ++SF+ L WR + L + P + +P VVLGNKID++ R V ++ A+ WC K +IPYFE K Sbjct: 1 MNPRKKVDLKLIIIGALGVGKTSLLHRYVHKTFYEDYQTTLGASILSKIIILEDTTLKLQIWDTGGQERFRSMVSTFYKGSDGCVLAFDVTDLESFEALETWRGDVLAKTIPME-QPYPMVVLGNKIDLE---DRQVPQEVAQGWCKEK-DIPYFEVSAK 155
BLAST of FC928204 vs. ExPASy Swiss-Prot
Match: RAB7B_MOUSE (Ras-related protein Rab-7b OS=Mus musculus GN=Rab7b PE=1 SV=1) HSP 1 Score: 145.976 bits (367), Expect = 1.366e-34 Identity = 73/160 (45.62%), Postives = 107/160 (66.88%), Query Frame = 1 Query: 106 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETLCK 585 M R++ LK+II+G GVGKTSL++QYV+K F +Y+ T+GA L+K + +D LQIWDT GQERF+S+ FY+G+D C+L +DV +SF+ L+ WR++ L + P + ++P VVLGNKID++ R VS++ WC K ++PYFE K Sbjct: 1 MNPRKKVDLKLIIVGALGVGKTSLLHQYVHKTFFEEYQTTLGASILSKIIILDDTTLKLQIWDTGGQERFRSMVSTFYKGSDGCILAFDVTDPESFEALDIWRDDVLAKIIPME-QSYPMVVLGNKIDLE---DRKVSQEVVHGWCKEK-DMPYFEVSAK 155
BLAST of FC928204 vs. ExPASy Swiss-Prot
Match: RAB7B_HUMAN (Ras-related protein Rab-7b OS=Homo sapiens GN=RAB7B PE=2 SV=1) HSP 1 Score: 142.895 bits (359), Expect = 1.156e-33 Identity = 73/160 (45.62%), Postives = 106/160 (66.25%), Query Frame = 1 Query: 106 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETLCK 585 M R++ LK+II+G GVGKTSL++QYV+K F +Y+ T+GA L+K + D LQIWDT GQERF+S+ FY+G+D C+L +DV ++SF+ L+ WR + L + P + ++P V+LGNKID+ R V ++ A+ WC K +IPYFE K Sbjct: 1 MNPRKKVDLKLIIVGAIGVGKTSLLHQYVHKTFYEEYQTTLGASILSKIIILGDTTLKLQIWDTGGQERFRSMVSTFYKGSDGCILAFDVTDLESFEALDIWRGDVLAKIVPME-QSYPMVLLGNKIDL---ADRKVPQEVAQGWCREK-DIPYFEVSAK 155
BLAST of FC928204 vs. ExPASy Swiss-Prot
Match: RB27A_PIG (Ras-related protein Rab-27A OS=Sus scrofa GN=RAB27A PE=2 SV=1) HSP 1 Score: 117.472 bits (293), Expect = 5.203e-26 Identity = 68/160 (42.50%), Postives = 99/160 (61.88%), Query Frame = 1 Query: 127 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFE----------DRLFTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFET 576 L+K + LGDSGVGKTS++ QY + KF++++ T+G DF K V + + LQ+WDTAGQERF+SL AF+R A +L++D+ + +SF N+ NW + + A +PD V+ GNK D++ + RVV E++AR A K IPYFET Sbjct: 9 LIKFLALGDSGVGKTSVLYQYTDGKFNSKFITTVGIDFREKRVVYRANGPDGAIGRGQRIHLQLWDTAGQERFRSLTTAFFRDAMGFLLLFDLTNEQSFLNVRNWISQLQMHAYCENPD---IVLCGNKSDLE--DQRVVKEEEARG-LAEKYGIPYFET 162
BLAST of FC928204 vs. ExPASy Swiss-Prot
Match: RABL_DICDI (Ras-related protein RabL OS=Dictyostelium discoideum GN=rabL PE=3 SV=1) HSP 1 Score: 117.087 bits (292), Expect = 6.796e-26 Identity = 60/161 (37.27%), Postives = 92/161 (57.14%), Query Frame = 1 Query: 121 RTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKIDVDGGNSRVVSEKKARAWCAS------KGNIPYFETLCK 585 +T+LK+I LGDS VGKTSL YVN ++ +IG D+ KE++ E++ L +WDT GQERFQ+ ++RGA+C L +D+++ +SF NL W +E + N PFV++G K D+ + +S+ + WC + + YFET K Sbjct: 5 KTMLKIITLGDSNVGKTSLFYHYVNGEYRYNRPPSIGPDYFIKELKVENKHVFLMVWDTCGQERFQAFSPPYFRGANCYTLCFDIHNEESFINLGKWMDEIIKYCY----GNIPFVLVGTKSDIP-RTDKSISKARIEQWCKNIEDQGIIDKVHYFETSAK 160
BLAST of FC928204 vs. ExPASy Swiss-Prot
Match: RAB13_MESAU (Ras-related protein Rab-13 OS=Mesocricetus auratus GN=RAB13 PE=2 SV=1) HSP 1 Score: 117.087 bits (292), Expect = 6.796e-26 Identity = 62/153 (40.52%), Postives = 94/153 (61.44%), Query Frame = 1 Query: 127 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETLCK 585 L K++++GDSGVGKT L+ ++ F+N Y +TIG DF + V+ E + LQ+WDTAGQERF+++ A+YRGA +LVYD+ KSF+N+ NW + AS ++LGNK D++ +V+ E+ + A + I +FET K Sbjct: 8 LFKLLLIGDSGVGKTCLIIRFAEDNFNNTYISTIGIDFKIRTVEIEGKRIKLQVWDTAGQERFKTITTAYYRGAMGIILVYDITDEKSFENIQNWMKSIKENASA----GVERLLLGNKCDME-AKRKVLKEQADK--LAREHGIRFFETSAK 153
BLAST of FC928204 vs. ExPASy Swiss-Prot
Match: YPTV2_VOLCA (GTP-binding protein yptV2 OS=Volvox carteri GN=YPTV2 PE=3 SV=1) HSP 1 Score: 116.701 bits (291), Expect = 8.875e-26 Identity = 62/153 (40.52%), Postives = 97/153 (63.40%), Query Frame = 1 Query: 127 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETLCK 585 L+K++++GDSGVGK+ L+ ++ + F++ + TIG DF K+V + +L LQIWDTAGQERF+++ A+YRGA +LVYD+ SF+N+ NW AS DN +++GNK+D+ + RVVS + +A A + ++ET K Sbjct: 13 LIKLLLVGDSGVGKSCLLLRFTDDMFTSSFITTIGIDFKIKKVDVDGKLVKLQIWDTAGQERFRTITSAYYRGAQGIILVYDITDEASFNNVRNWMRNIEQHAS----DNVNKILVGNKLDL-AEDKRVVSIARGQA-LADEFGFRFYETSAK 159
BLAST of FC928204 vs. ExPASy Swiss-Prot
Match: RB27A_CANFA (Ras-related protein Rab-27A OS=Canis familiaris GN=RAB27A PE=2 SV=1) HSP 1 Score: 116.701 bits (291), Expect = 8.875e-26 Identity = 68/160 (42.50%), Postives = 98/160 (61.25%), Query Frame = 1 Query: 127 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFE----------DRLFTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFET 576 L+K + LGDSGVGKTS++ QY + KF++++ T+G DF K V + + LQ+WDTAGQERF+SL AF+R A +L++D+ + +SF N+ NW + + A +PD V+ GNK D++ + RVV E+ AR A K IPYFET Sbjct: 9 LIKFLALGDSGVGKTSVLYQYTDGKFNSKFITTVGIDFREKRVVYRANGPDGAIGRGQRIHLQLWDTAGQERFRSLTTAFFRDAMGFLLLFDLTNEQSFLNVRNWISQLQMHAYCENPD---IVLCGNKSDLE--DQRVVKEEDARG-LAEKYGIPYFET 162
BLAST of FC928204 vs. ExPASy Swiss-Prot
Match: RAB1C_DICDI (Ras-related protein Rab-1C OS=Dictyostelium discoideum GN=Rab1C PE=2 SV=1) HSP 1 Score: 116.701 bits (291), Expect = 8.875e-26 Identity = 60/153 (39.22%), Postives = 100/153 (65.36%), Query Frame = 1 Query: 127 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETLCK 585 LLK++++GDSGVGK+ ++ ++ + +F++ Y +TIG DF + ++ + + LQIWDTAGQERF+++ ++YRGA ++VYD+ SM SF+++ W + ASPS +++GNK D++ + R V K A+ + A + NIP ET K Sbjct: 33 LLKILVIGDSGVGKSCMLLRFADNRFTDSYISTIGVDFCIRTIELDGKKIKLQIWDTAGQERFKTITTSYYRGAHGLIIVYDITSMDSFNSIKRWLIDVDRFASPS----VLKLIVGNKCDLN--SKRAVDFKIAKKF-ADELNIPIMETSAK 178
BLAST of FC928204 vs. ExPASy Swiss-Prot
Match: RAB13_HUMAN (Ras-related protein Rab-13 OS=Homo sapiens GN=RAB13 PE=1 SV=1) HSP 1 Score: 116.701 bits (291), Expect = 8.875e-26 Identity = 63/153 (41.18%), Postives = 92/153 (60.13%), Query Frame = 1 Query: 127 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETLCK 585 L K++++GDSGVGKT L+ ++ F+N Y +TIG DF + V E + LQ+WDTAGQERF+++ A+YRGA +LVYD+ KSF+N+ NW + AS ++LGNK D++ R V +++A G I +FET K Sbjct: 8 LFKLLLIGDSGVGKTCLIIRFAEDNFNNTYISTIGIDFKIRTVDIEGKKIKLQVWDTAGQERFKTITTAYYRGAMGIILVYDITDEKSFENIQNWMKSIKENASA----GVERLLLGNKCDMEA--KRKVQKEQADKLAREHG-IRFFETSAK 153 The following BLAST results are available for this feature:
BLAST of FC928204 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC928204 ID=FC928204; Name=FC928204; organism=Citrus clementina; type=EST; length=595bpback to top |