FC928204
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC928204 vs. ExPASy Swiss-Prot
Match: RAN_CAEEL (GTP-binding nuclear protein ran-1 OS=Caenorhabditis elegans GN=ran-1 PE=1 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 2.423e-15 Identity = 42/157 (26.75%), Postives = 78/157 (49.68%), Query Frame = 1 Query: 133 KVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKIDVDGGNSRVVSEKKARAWCAS---KGNIPYFETLCKRRH 594 K++++GD G GKT+ + +++ +F +Y AT+G + +WDTAGQE+F L +Y C ++++DV + ++ N+ NW + +N P V+ GNK+D V ++K +A + K N+ Y++ K + Sbjct: 11 KLVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNRGQIRFNVWDTAGQEKFGGLRDGYYIQGQCAIIMFDVTARVTYKNVPNWHRDLARVC-----ENIPIVLCGNKVD--------VKDRKVKAKTITFHRKKNLQYYDISAKSNY 154
BLAST of FC928204 vs. ExPASy Swiss-Prot
Match: RAN1_ORYSJ (GTP-binding nuclear protein Ran-1 OS=Oryza sativa subsp. japonica GN=RAN1 PE=2 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 2.423e-15 Identity = 45/154 (29.22%), Postives = 76/154 (49.35%), Query Frame = 1 Query: 133 KVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETLCKRRH 594 K++I+GD G GKT+ + +++ +F +Y+ TIG + + WDTAGQE+F L +Y C ++++DV S ++ N+ W + +N P V+ GNK+DV +R V K+ K N+ Y+E K + Sbjct: 15 KLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTSRLTYKNVPTWHRDLCRVC-----ENIPIVLCGNKVDV---KNRQVKAKQVT--FHRKKNLQYYEVSAKSNY 158
BLAST of FC928204 vs. ExPASy Swiss-Prot
Match: RAN1_ORYSI (GTP-binding nuclear protein Ran-1 OS=Oryza sativa subsp. indica GN=RAN1 PE=2 SV=2) HSP 1 Score: 82.0333 bits (201), Expect = 2.423e-15 Identity = 45/154 (29.22%), Postives = 76/154 (49.35%), Query Frame = 1 Query: 133 KVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETLCKRRH 594 K++I+GD G GKT+ + +++ +F +Y+ TIG + + WDTAGQE+F L +Y C ++++DV S ++ N+ W + +N P V+ GNK+DV +R V K+ K N+ Y+E K + Sbjct: 15 KLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTSRLTYKNVPTWHRDLCRVC-----ENIPIVLCGNKVDV---KNRQVKAKQVT--FHRKKNLQYYEVSAKSNY 158
BLAST of FC928204 vs. ExPASy Swiss-Prot
Match: RAB20_HUMAN (Ras-related protein Rab-20 OS=Homo sapiens GN=RAB20 PE=1 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 2.423e-15 Identity = 47/132 (35.61%), Postives = 74/132 (56.06%), Query Frame = 1 Query: 133 KVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKIDVDGGNSRVVSEKK 528 K+++LGD VGKTSL+ +Y+ ++F + +T+G F K+ R + + IWDTAG+E+F LG + RGA +L YDVN +S L + FL + D F ++GNK+D+ + EK+ Sbjct: 7 KIVLLGDMNVGKTSLLQRYMERRFPDTV-STVGGAFYLKQW----RSYNISIWDTAGREQFHGLGSMYCRGAAAIILTYDVNHRQSLVEL---EDRFLGLTDTASKDCL-FAIVGNKVDLTEEGALAGQEKE 129
BLAST of FC928204 vs. ExPASy Swiss-Prot
Match: RASK_XENLA (GTPase KRas OS=Xenopus laevis GN=kras PE=2 SV=1) HSP 1 Score: 81.2629 bits (199), Expect = 4.132e-15 Identity = 51/156 (32.69%), Postives = 87/156 (55.77%), Query Frame = 1 Query: 124 TLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETLCKRR 591 T K++++G GVGK++L Q + F ++Y TI D K+V + L I DTAGQE + ++ + R + + V+ +N++KSF++++++RE+ D ++ P V++GNK + SR V K+A+ S G IP+ ET K R Sbjct: 2 TEYKLVVVGAVGVGKSALTIQLIQNHFVDEYDPTI-EDSYRKQVVIDGETCLLDILDTAGQEEYSAMRDQYMRTGEGFLCVFAINNIKSFEDIHHYREQI---KRVKDSEDVPMVLVGNKCALP---SRTVDTKQAQDLARSYG-IPFIETSAKTR 149
BLAST of FC928204 vs. ExPASy Swiss-Prot
Match: RAS3_DROME (Ras-like protein 3 OS=Drosophila melanogaster GN=R PE=2 SV=2) HSP 1 Score: 81.2629 bits (199), Expect = 4.132e-15 Identity = 50/153 (32.68%), Postives = 86/153 (56.21%), Query Frame = 1 Query: 133 KVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETLCKRR 591 K+++LG GVGK++L Q+V F +Y TI D K+V+ + + L+I DTAG E+F ++ + + VLVY + + +F++L + RE+ L D D+ P V++GNK D++ RVV ++ + A++ N + ET K + Sbjct: 5 KIVVLGSGGVGKSALTVQFVQCIFVEKYDPTI-EDSYRKQVEVDGQQCMLEILDTAGTEQFTAMRDLYMKNGQGFVLVYSITAQSTFNDLQDLREQIL---RVKDTDDVPMVLVGNKCDLE--EERVVGKELGKN-LATQFNCAFMETSAKAK 150
BLAST of FC928204 vs. ExPASy Swiss-Prot
Match: RAS1_DROMO (Ras-like protein 1 OS=Drosophila mojavensis GN=Ras85D PE=3 SV=1) HSP 1 Score: 81.2629 bits (199), Expect = 4.132e-15 Identity = 51/156 (32.69%), Postives = 79/156 (50.64%), Query Frame = 1 Query: 124 TLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETLCKRR 591 T K++++G GVGK++L Q + F ++Y TI D K+V + L I DTAGQE + ++ + R + +LV+ VNS KSF+++ +RE+ D + P V++GNK D+ N A + IPY ET K R Sbjct: 2 TEYKLVVVGAGGVGKSALTIQLIQNHFVDEYDPTI-EDSYRKQVVIDGETCLLDILDTAGQEEYSAMRDQYMRTGEGFLLVFAVNSAKSFEDIGTYREQI---KRVKDAEEVPMVLVGNKCDLPSWN------------VAKQYGIPYIETSAKTR 141
BLAST of FC928204 vs. ExPASy Swiss-Prot
Match: RAS2_HYDMA (Ras-like protein RAS2 OS=Hydra magnipapillata GN=RAS2 PE=2 SV=1) HSP 1 Score: 80.8777 bits (198), Expect = 5.397e-15 Identity = 49/153 (32.03%), Postives = 81/153 (52.94%), Query Frame = 1 Query: 133 KVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETLCKRR 591 K++++G GVGK++L Q++ F Y TI D K+ +D++ L I DTAGQE F ++ + R + +LV+ V SFD + + + L D + FP +++GNK D++ N R VS +A+ K + Y E+ K+R Sbjct: 10 KLVVVGGGGVGKSALTIQFIQSHFVQDYDPTI-EDSYRKQCVIDDKVAHLDILDTAGQEEFSAMRDEYMRTGEGFLLVFSVTDRSSFDEIPRFHTQIL---RVKDIEEFPMILVGNKSDLE--NERTVSTAEAQE-LGRKLKVSYLESSAKQR 155
BLAST of FC928204 vs. ExPASy Swiss-Prot
Match: RAP1_PHYPO (Ras-related protein Rap-1 OS=Physarum polycephalum GN=RAP1 PE=2 SV=1) HSP 1 Score: 80.8777 bits (198), Expect = 5.397e-15 Identity = 52/162 (32.10%), Postives = 85/162 (52.47%), Query Frame = 1 Query: 106 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETLCKRR 591 MP R K+++LG GVGK++L Q+V F +Y TI D K+V+ + + L+I DTAG E+F ++ + + VLVY + +M +F++L + RE+ L D D+ P V++GNK D+ RV+S ++ G + E K + Sbjct: 1 MPLRE---FKIVVLGSGGVGKSALTVQFVQGIFVEKYDPTI-EDSYRKQVEVDGQQCMLEILDTAGTEQFTAMRDLYMKNGQGFVLVYSIIAMSTFNDLPDLREQIL---RVKDCDDVPMVLVGNKCDL--AEQRVISTEQGDELARKFGGCAFLEASAKNK 153
BLAST of FC928204 vs. ExPASy Swiss-Prot
Match: RALA_SAGOE (Ras-related protein Ral-A OS=Saguinus oedipus GN=RALA PE=1 SV=1) HSP 1 Score: 80.8777 bits (198), Expect = 5.397e-15 Identity = 51/155 (32.90%), Postives = 84/155 (54.19%), Query Frame = 1 Query: 127 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETLCKRR 591 L KVI++G GVGK++L Q++ +F Y+ T AD K+V + + I DTAGQE + ++ ++R + + V+ + M+SF ++RE+ L + +N PF+++GNK D++ V E K R A + N+ Y ET K R Sbjct: 14 LHKVIMVGSGGVGKSALTLQFMYDEFVEDYEPT-KADSYRKKVVLDGEEVQIDILDTAGQEDYAAIRDNYFRSGEGFLCVFSITEMESFAATADFREQIL---RVKEDENVPFLLVGNKSDLEDKRQVSVEEAKNR---ADQWNVNYVETSAKTR 161 The following BLAST results are available for this feature:
BLAST of FC928204 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC928204 ID=FC928204; Name=FC928204; organism=Citrus clementina; type=EST; length=595bpback to top |