FC928204
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC928204 vs. ExPASy Swiss-Prot
Match: RB27B_BOVIN (Ras-related protein Rab-27B OS=Bos taurus GN=RAB27B PE=2 SV=3) HSP 1 Score: 115.161 bits (287), Expect = 2.582e-25 Identity = 66/160 (41.25%), Postives = 98/160 (61.25%), Query Frame = 1 Query: 127 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDR----------LFTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFET 576 L+K++ LGDSGVGKT+ + +Y + KF+ ++ T+G DF K V + + LQ+WDTAGQERF+SL AF+R A +L++D+ S +SF N+ NW + A +PD V++GNK D+ + R V+E++AR A K +IPYFET Sbjct: 9 LIKLLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVAYNTQGPNGPTGKAFKVHLQLWDTAGQERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNVRNWMSQLQANAYCENPD---IVLIGNKADLP--DQREVNERQARD-LAEKYSIPYFET 162
BLAST of FC928204 vs. ExPASy Swiss-Prot
Match: RB11C_DICDI (Ras-related protein Rab-11C OS=Dictyostelium discoideum GN=rab11C PE=1 SV=1) HSP 1 Score: 115.161 bits (287), Expect = 2.582e-25 Identity = 60/150 (40.00%), Postives = 94/150 (62.67%), Query Frame = 1 Query: 127 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFET 576 L K++I+GDS VGK++L+N++ +F+ + KATIG DF TK ++ +++ T Q WDTAGQERF+++ +YRGA ++VYD+ S SF N+ W E A + +++GNK D++ SR V K+A+A+ A I + ET Sbjct: 10 LFKIVIIGDSAVGKSNLLNRFTRNEFTEKTKATIGVDFGTKSIEIDNKTITAQCWDTAGQERFRAVTSGYYRGAVGAMIVYDITSKISFKNVTRWLNELREMAE----QDILIMMVGNKSDLE--MSREVPTKEAQAF-AESNKISFLET 152
BLAST of FC928204 vs. ExPASy Swiss-Prot
Match: RABO_DICDI (Ras-related protein RabO OS=Dictyostelium discoideum GN=rabO PE=3 SV=1) HSP 1 Score: 114.775 bits (286), Expect = 3.373e-25 Identity = 58/160 (36.25%), Postives = 93/160 (58.13%), Query Frame = 1 Query: 127 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKIDVDGGNSRVVSEKKARAWCAS-------KGNIPYFETLCK 585 L++V++LGD VGKT+ + K+F IG DF K + +++ LQ+WDT GQERF+++ +++R CC+L + V+ KSF+N++ W + + D N+P V++GNKID+ V+++K A WC + K +IPYFET K Sbjct: 8 LIRVVLLGDYCVGKTTTGFVFDGKQFDFSRNCNIGVDFFVKHIVVDNQCVRLQVWDTGGQERFKTITRSYFRNTSCCLLFFSVDDQKSFENIDMW---YSLAFEKYDLLNYPVVLVGNKIDLP-QEKHVITKKMAEEWCKNQQTKLNLKFSIPYFETSAK 163
BLAST of FC928204 vs. ExPASy Swiss-Prot
Match: RAB13_MOUSE (Ras-related protein Rab-13 OS=Mus musculus GN=Rab13 PE=2 SV=1) HSP 1 Score: 114.775 bits (286), Expect = 3.373e-25 Identity = 62/153 (40.52%), Postives = 92/153 (60.13%), Query Frame = 1 Query: 127 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETLCK 585 L K++++GDSGVGKT L+ ++ F++ Y +TIG DF + V E + LQ+WDTAGQERF+++ A+YRGA +LVYD+ KSF+N+ NW + AS ++LGNK D++ R V ++A A + I +FET K Sbjct: 8 LFKLLLIGDSGVGKTCLIIRFAEDNFNSTYISTIGIDFKIRTVDIEGKRIKLQVWDTAGQERFKTITTAYYRGAMGIILVYDITDEKSFENIQNWMKSIKENASA----GVERLLLGNKCDMEA--KRQVQREQAEK-LAREHRIRFFETSAK 153
BLAST of FC928204 vs. ExPASy Swiss-Prot
Match: YPTV1_VOLCA (GTP-binding protein yptV1 OS=Volvox carteri GN=YPTV1 PE=3 SV=1) HSP 1 Score: 114.39 bits (285), Expect = 4.405e-25 Identity = 60/153 (39.22%), Postives = 98/153 (64.05%), Query Frame = 1 Query: 127 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETLCK 585 L K++++GDSGVGK+ L+ ++ + ++ Y +TIG DF + V+ + ++ LQIWDTAGQERF+++ ++YRGA ++VYDV +SF+N+ W E AS +N +++GNK D+ G +VV + A+A+ A + IP+ ET K Sbjct: 8 LFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTVELDGKVIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLAEIDRYAS----ENVNKLLVGNKSDLTG--KKVVDYQAAKAF-ADEIGIPFLETSAK 153
BLAST of FC928204 vs. ExPASy Swiss-Prot
Match: RYL1_YARLI (Ras-like GTP-binding protein RYL1 OS=Yarrowia lipolytica GN=RYL1 PE=3 SV=1) HSP 1 Score: 114.39 bits (285), Expect = 4.405e-25 Identity = 60/153 (39.22%), Postives = 95/153 (62.09%), Query Frame = 1 Query: 127 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETLCK 585 L+K++++GDSGVGK+ L+ ++ +F+ + TIG DF + + ++ LQ+WDTAGQERF+++ A+YRGA +LVYDV KSF+N+ NW + A+ + +++GNK D+D RVVS ++ +A A K IP+ E K Sbjct: 11 LIKLLLIGDSGVGKSCLLLRFCEDQFTPSFITTIGIDFKIRTIDIGNQRVKLQVWDTAGQERFRTITTAYYRGAMGILLVYDVTDEKSFNNIENWYQNVQSYAN----EGVELILVGNKCDLD--EKRVVSTEQGQA-LADKFGIPFLEASSK 156
BLAST of FC928204 vs. ExPASy Swiss-Prot
Match: RB27B_RAT (Ras-related protein Rab-27B OS=Rattus norvegicus GN=Rab27b PE=2 SV=3) HSP 1 Score: 114.39 bits (285), Expect = 4.405e-25 Identity = 66/160 (41.25%), Postives = 98/160 (61.25%), Query Frame = 1 Query: 127 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDR----------LFTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFET 576 L+K++ LGDSGVGKT+ + +Y + KF+ ++ T+G DF K V ++ + LQ+WDTAGQERF+SL AF+R A +L++D+ S +SF N+ NW + A +PD V++GNK D+ + R V+E++AR A K IPYFET Sbjct: 9 LIKLLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYDTQGADGSSGKAFKVHLQLWDTAGQERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNVRNWMSQLQANAYCENPD---IVLIGNKADL--LDQREVNERQARE-LAEKYGIPYFET 162
BLAST of FC928204 vs. ExPASy Swiss-Prot
Match: RB27B_HUMAN (Ras-related protein Rab-27B OS=Homo sapiens GN=RAB27B PE=1 SV=4) HSP 1 Score: 114.39 bits (285), Expect = 4.405e-25 Identity = 66/160 (41.25%), Postives = 97/160 (60.62%), Query Frame = 1 Query: 127 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDR----------LFTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFET 576 L+K++ LGDSGVGKT+ + +Y + KF+ ++ T+G DF K V + + LQ+WDTAGQERF+SL AF+R A +L++D+ S +SF N+ NW + A +PD V++GNK D+ + R V+E++AR A K IPYFET Sbjct: 9 LIKLLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYNAQGPNGSSGKAFKVHLQLWDTAGQERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNVRNWMSQLQANAYCENPD---IVLIGNKADLP--DQREVNERQARE-LADKYGIPYFET 162
BLAST of FC928204 vs. ExPASy Swiss-Prot
Match: YPTM2_MAIZE (GTP-binding protein YPTM2 OS=Zea mays GN=YPTM2 PE=2 SV=1) HSP 1 Score: 114.005 bits (284), Expect = 5.753e-25 Identity = 60/153 (39.22%), Postives = 97/153 (63.40%), Query Frame = 1 Query: 127 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETLCK 585 L K++++GDSGVGK+ L+ ++ + + + Y +TIG DF + V+ + + LQIWDTAGQERF+++ ++YRGA ++VYDV +SF+N+ W E AS DN +++GNK D+ ++VV+ + A+A+ G IP+ ET K Sbjct: 8 LFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYAS----DNVNKLLVGNKSDLTA--NKVVATETAKAFADEMG-IPFMETSAK 153
BLAST of FC928204 vs. ExPASy Swiss-Prot
Match: YPTC6_CHLRE (Ras-related protein YPTC6 OS=Chlamydomonas reinhardtii GN=YPTC6 PE=3 SV=1) HSP 1 Score: 113.62 bits (283), Expect = 7.513e-25 Identity = 57/150 (38.00%), Postives = 96/150 (64.00%), Query Frame = 1 Query: 127 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFET 576 L KV+++GDSGVGK++L++++ +FS + K+TIG +F T+ +Q + + QIWDTAGQER++++ A+YRGA +LVYD+ +F+N+ W +E A N +++GNK D+ + R V + A+A+C +G + + ET Sbjct: 12 LFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKSVTFENVERWLKELRDHAD----SNIVIMLVGNKSDLK--HLRDVQTEVAQAFCEREG-LSFIET 154 The following BLAST results are available for this feature:
BLAST of FC928204 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC928204 ID=FC928204; Name=FC928204; organism=Citrus clementina; type=EST; length=595bpback to top |