FC928214

Overview
NameFC928214
Unique NameFC928214
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length843
Libraries
Library NameType
TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC928214 vs. ExPASy Swiss-Prot
Match: ACCR3_ARATH (Putative serine/threonine-protein kinase-like protein CCR3 OS=Arabidopsis thaliana GN=CCR3 PE=2 SV=1)

HSP 1 Score: 105.916 bits (263), Expect = 2.892e-22
Identity = 71/237 (29.96%), Postives = 116/237 (48.95%), Query Frame = 2
Query:  137 SELEAACEDFS--NVIGSSPIGTVYKGTLSNGVEIXXXXXXXXXXKDWPKNLEVQFRKKIDTLSKVNHKNFVNLIGFCEEEEPFTRMMVFEYAPNGTLFEHIHIKESEHL------DWGMRLRIAMGMAYCLEHMHQLN-PPIAHNYLNSSAVHLTEDYAAKLSD--LSFWNEI-------------AMAEMXXXXXXXXXXXXXXXXXNVYNFGVLLFEMVTGRLPYLVDNGSLED 775
            SEL +A  +FS  N IGS   G VY+G L++G E+              +  E  F  +I  LS+++HK+ V L+G+CEE E   +++V++Y  NG L++H+H K +          W MR++IA+  A  +E++H    PPI H  + SS + L  ++ A++SD  LS    +             A   +                 +VY  GV+L E++TG+     +NG +E+
Sbjct:  487 SELASATGNFSLENKIGSGSFGVVYRGKLNDGREVAIKRGEVNAKMKKFQEKETAFDSEIAFLSRLHHKHLVRLVGYCEERE--EKLLVYDYMKNGALYDHLHDKNNVEKHSSLINSWKMRIKIALDAARGIEYLHNYAVPPIIHRDIKSSNILLDSNWVARVSDFGLSLMGPVLGKDHNPYQRPTKAAGTVGYIDPEYYSLNVLTDKSDVYGLGVVLLELLTGKRAIFRNNGDVEE 721          
BLAST of FC928214 vs. ExPASy Swiss-Prot
Match: WAKLH_ARATH (Wall-associated receptor kinase-like 9 OS=Arabidopsis thaliana GN=WAKL9 PE=2 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 1.435e-21
Identity = 83/269 (30.86%), Postives = 135/269 (50.19%), Query Frame = 2
Query:   11 LVATVGIYLC-----RCNKVSTVKPWATGLSGQL-QKAFVTGVPKLKRS------ELEAACEDFSN--VIGSSPIGTVYKGTLSNGVEIXXXXXXXXXXKDWPKNLEVQFRKKIDTLSKVNHKNFVNLIGFCEEEEPFTRMMVFEYAPNGTLFEHIHIKESEHL--DWGMRLRIAMGMAYCLEHMHQ-LNPPIAHNYLNSSAVHLTEDYAAKLSDL----------SFWNEIAMAEMXXXXXXXXXXXXXXXXXNVYNFGVLLFEMVTG 736
            L+  VGIYL      +  K++  K +     G L Q+  ++ V  ++++      ELE A E+FS+  ++G    GTVYKG L +G  I          +D    LE +F  ++  LS++NH+N V L+G C E +    ++V+E+ PNG LFEH+H +  E++   W +RLRIA+ +A  L ++H   + PI H  + S+ + L E Y AK+SD           +    +    +                 +VY+FGV+L E++TG
Sbjct:  384 LIFVVGIYLLYKFIKKQRKLNQKKKFFKRNGGLLLQQQLISTVGMVEKTIVFSSRELEKATENFSSNRILGQGGQGTVYKGMLVDG-RIVAVKKSKVVDED---KLE-EFINEVVILSQINHRNIVKLLGCCLETK--VPVLVYEFIPNGNLFEHLHDEFDENIMATWNIRLRIAIDIAGALSYLHSSASSPIYHRDVKSTNIMLDEKYRAKVSDFGTSRTVTVDHTHLTTVVSGTVGYMDPEYFQSSQFTDKSDVYSFGVVLVELITG 645          
BLAST of FC928214 vs. ExPASy Swiss-Prot
Match: SRF3_ARATH (Protein STRUBBELIG-RECEPTOR FAMILY 3 OS=Arabidopsis thaliana GN=SRF3 PE=1 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 1.435e-21
Identity = 72/261 (27.59%), Postives = 122/261 (46.74%), Query Frame = 2
Query:  110 VTGVPKLKRSELEAACEDFS--NVIGSSPIGTVYKGTLSNGVEIXXXXXXXXXXKDWPKNLEVQFRKKIDTLSKVNHKNFVNLIGFCEEEEPFTRMMVFEYAPNGTLFEHIHIKE--SEHLDWGMRLRIAMGMAYCLEHMHQL-NPPIAHNYLNSSAVHLTEDYAAKLSDLSFWNEIAMAEM----------XXXXXXXXXXXXXXXXXNVYNFGVLLFEMVTGRLPYLVDNGSLED----WAADYLSGVPPLQQFVDPTL 835
            +T V     + L+   E F+  N+IGS  +G+VY+  L NG             +   +  + +F + ++ +  + H N V L+G+C E +   R++V+EY  NGTL + +H  +   + L W  R+ +A+G A  LE++H++  PPI H    S+ V L +D +  +SD      I+   +                           +VY+FGV++ E++TGR+ Y  D    E     WA   L  +  L + VDP+L
Sbjct:  467 LTSVKHYSIASLQQYTESFAQENLIGSGMLGSVYRARLPNGKLFAVKKLDKRASE---QQQDHEFIELVNNIDMIRHSNIVELVGYCAEHD--QRLLVYEYCSNGTLQDGLHSDDEFKKKLSWNTRVSMALGAARALEYLHEVCEPPIIHRNFKSANVLLDDDLSVLVSDCGLAPLISSGSVSQLSGQLLAAYGYGAPEFDSGIYTWQSDVYSFGVVMLELLTGRMSYDRDRSRGEQFLVRWAIPQLHDIDALGKMVDPSL 722          
BLAST of FC928214 vs. ExPASy Swiss-Prot
Match: Y5838_ARATH (Probably inactive leucine-rich repeat receptor-like protein kinase At5g48380 OS=Arabidopsis thaliana GN=At5g48380 PE=1 SV=1)

HSP 1 Score: 102.834 bits (255), Expect = 2.448e-21
Identity = 84/289 (29.07%), Postives = 130/289 (44.98%), Query Frame = 2
Query:   71 WATGLSGQLQKA---FVTGVPKLKRSELEAACEDFS--NVIGSSPIGTVYKGTLSNGVEIXXXXXXXXXXKDWPKNLEVQFRKKIDTLSKVNHKNFVNLIGFCEEEEPFTRMMVFEYAPNGTLFEHIHIKESEH---LDWGMRLRIAMGMAYCLEHMHQ-LNPPIAHNYLNSSAVHLTEDYAAKLSD-------------LSFWNEIAMAEMXXXXXXXXXXXXXXXXXNVYNFGVLLFEMVTGRLPYLVD------------NGSLEDWAADYLSGVPPLQQFVDPTL 835
            WA  L GQ       F   V K+K S+L  A E+F   N+I +   GT+YKG L +G  +              +  E +F  ++ TL  V ++N V L+G+C   +   R++++EY  NG L++ +H  + E    LDW  RL+IA+G A  L  +H   NP I H  ++S  + LT ++  K+SD             LS +      +                  +VY+FGV+L E+VTG+    V              G+L +W    LS    LQ+ +D +L
Sbjct:  269 WAKSLKGQKGVKVFMFKKSVSKMKLSDLMKATEEFKKDNIIATGRTGTMYKGRLEDGSLLMIKRLQDS------QRSEKEFDAEMKTLGSVKNRNLVPLLGYCVANKE--RLLMYEYMANGYLYDQLHPADEESFKPLDWPSRLKIAIGTAKGLAWLHHSCNPRIIHRNISSKCILLTAEFEPKISDFGLARLMNPIDTHLSTFVNGEFGDFGYVAPEYSRTMVATPKGDVYSFGVVLLELVTGQKATSVTKVSEEKAEEENFKGNLVEWITK-LSSESKLQEAIDRSL 548          
BLAST of FC928214 vs. ExPASy Swiss-Prot
Match: Y2317_ARATH (Probable leucine-rich repeat receptor-like protein kinase At2g33170 OS=Arabidopsis thaliana GN=At2g33170 PE=2 SV=1)

HSP 1 Score: 102.834 bits (255), Expect = 2.448e-21
Identity = 77/298 (25.84%), Postives = 133/298 (44.63%), Query Frame = 2
Query:    2 AILLVATVGIYLCRCNKVSTVKPWATGLSGQLQKAFVTGVPKLKRS--ELEAACEDF--SNVIGSSPIGTVYKGTLSNG--VEIXXXXXXXXXXKDWPKNLEVQFRKKIDTLSKVNHKNFVNLIGFCEEEEPFTRMMVFEYAPNGTLFEHIHIKESEHLDWGMRLRIAMGMAYCLEHMHQ-LNPPIAHNYLNSSAVHLTEDYAAKLSDLSFWNEIAM----------AEMXXXXXXXXXXXXXXXXXNVYNFGVLLFEMVTGRLPY--LVDNGSLEDWAADYLSGVPPLQQFVDPTLT 838
            ++LL+A V  +L   N V    P+        Q++ +  VPK + +  ++  A + F  S ++G    GTVYK  + +G  + +           +   N +  FR +I TL K+ H+N V L  FC  +   + ++++EY   G+L E +H  +S  +DW  R  IA+G A  L ++H    P I H  + S+ + + E++ A + D      I M                              ++Y+FGV+L E++TG+ P   L   G L  W  +++       + +DP LT
Sbjct:  765 SLLLIAIVVHFLR--NPVEPTAPYVHDKEPFFQESDIYFVPKERFTVKDILEATKGFHDSYIVGRGACGTVYKAVMPSGKTIAVKKLESNREGNNNNSNNTDNSFRAEILTLGKIRHRNIVRLYSFCYHQGSNSNLLLYEYMSRGSLGELLHGGKSHSMDWPTRFAIALGAAEGLAYLHHDCKPRIIHRDIKSNNILIDENFEAHVGDFGLAKVIDMPLSKSVSAVAGSYGYIAPEYAYTMKVTEKCDIYSFGVVLLELLTGKAPVQPLEQGGDLATWTRNHIRDHSLTSEILDPYLT 1060          
BLAST of FC928214 vs. ExPASy Swiss-Prot
Match: Y1154_ARATH (Probable serine/threonine-protein kinase At1g01540 OS=Arabidopsis thaliana GN=At1g01540 PE=1 SV=2)

HSP 1 Score: 102.449 bits (254), Expect = 3.197e-21
Identity = 75/253 (29.64%), Postives = 122/253 (48.22%), Query Frame = 2
Query:  140 ELEAA----CEDFSNVIGSSPIGTVYKGTLSNGVEIXXXXXXXXXXKDWPKNLEVQFRKKIDTLSKVNHKNFVNLIGFCEEEEPFTRMMVFEYAPNGTLFEHIH--IKESEHLDWGMRLRIAMGMAYCLEHMHQ-LNPPIAHNYLNSSAVHLTEDYAAKLSDL----------SFWNEIAMAEMXXXXXXXXXXXXXXXXXNVYNFGVLLFEMVTGRLP--YLVDNG--SLEDWAADYLSGVPPLQQFVDPTL 835
            ELEAA    CE+  NVIG    G VY+G L++G ++          +      E +F+ +++ + +V HKN V L+G+C E     RM+V+++  NG L + IH  + +   L W +R+ I +GMA  L ++H+ L P + H  + SS + L   + AK+SD           S+     M                    ++Y+FG+L+ E++TGR P  Y    G  +L DW    + G    ++ VDP +
Sbjct:  146 ELEAATNGLCEE--NVIGEGGYGIVYRGILTDGTKVAVKNLLNNRGQ-----AEKEFKVEVEVIGRVRHKNLVRLLGYCVEGA--YRMLVYDFVDNGNLEQWIHGDVGDVSPLTWDIRMNIILGMAKGLAYLHEGLEPKVVHRDIKSSNILLDRQWNAKVSDFGLAKLLGSESSYVTTRVMGTFGYVAPEYACTGMLNEKSDIYSFGILIMEIITGRNPVDYSRPQGETNLVDWLKS-MVGNRRSEEVVDPKI 388          
BLAST of FC928214 vs. ExPASy Swiss-Prot
Match: ACR4_ARATH (Serine/threonine-protein kinase-like protein ACR4 OS=Arabidopsis thaliana GN=ACR4 PE=1 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 3.197e-21
Identity = 70/251 (27.89%), Postives = 122/251 (48.61%), Query Frame = 2
Query:  140 ELEAACEDFS--NVIGSSPIGTVYKGTLSNGVEIXXXXXXXXXXKDWPKNLEVQFRKKIDTLSKVNHKNFVNLIGFCEEEEPFTRMMVFEYAPNGTLFEHIHIKE---SEHLDWGMRLRIAMGMAYCLEHMH-QLNPPIAHNYLNSSAVHLTEDYAAKLSDL-----------SFWNEIAMAEMXXXXXXXXXXXXXXXXXNVYNFGVLLFEMVTGR--LPYLVDNGSLEDWAADYLSGVPPLQQFVDPTL 835
            ELE A + F   +++G      VYKG L +G  +          K    N   +FR ++D LS++NH + ++L+G+C  EE   R++V+E+  +G+L  H+H K     E LDW  R+ IA+  A  +E++H    PP+ H  + SS + + E++ A+++D            S   E+    +                 +VY+FGVLL E+++GR  +    + G++ +WA   +     +   +DP L
Sbjct:  504 ELEKAADGFKEESIVGKGSFSCVYKGVLRDGTTVAVKRAIMSSDKQKNSN---EFRTELDLLSRLNHAHLLSLLGYC--EECGERLLVYEFMAHGSLHNHLHGKNKALKEQLDWVKRVTIAVQAARGIEYLHGYACPPVIHRDIKSSNILIDEEHNARVADFGLSLLGPVDSGSPLAELPAGTLGYLDPEYYRLHYLTTKSDVYSFGVLLLEILSGRKAIDMHYEEGNIVEWAVPLIK-AGDINALLDPVL 748          
BLAST of FC928214 vs. ExPASy Swiss-Prot
Match: Y2296_ARATH (Probable receptor-like protein kinase At2g42960 OS=Arabidopsis thaliana GN=At2g42960 PE=2 SV=1)

HSP 1 Score: 101.293 bits (251), Expect = 7.123e-21
Identity = 74/253 (29.25%), Postives = 119/253 (47.04%), Query Frame = 2
Query:  140 ELEAACEDFS--NVIGSSPIGTVYKGTLSNGVEIXXXXXXXXXXKDWPKNLEVQFRKKIDTLSKVNHKNFVNLIGFCEEEEPFTRMMVFEYAPNGTLFEHIH--IKESEHLDWGMRLRIAMGMAYCLEHMHQ-LNPPIAHNYLNSSAVHLTEDYAAKLSDL----------SFWNEIAMAEMXXXXXXXXXXXXXXXXXNVYNFGVLLFEMVTGRLPYLVDNG------SLEDWAADYLSGVPPLQQFVDPTL 835
            +LE A   F+  NV+G    G VY+G L NG E+          +      E +FR +++ +  V HKN V L+G+C   E   RM+V+EY  +G L + +H  +++  +L W  R++I  G A  L ++H+ + P + H  + +S + + +++ AKLSD           S      M                    ++Y+FGVLL E +TGR P  VD G      +L +W    + G    ++ VDP L
Sbjct:  175 DLELATNRFAPVNVLGEGGYGVVYRGKLVNGTEVAVKKLLNNLGQ-----AEKEFRVEVEAIGHVRHKNLVRLLGYC--IEGVHRMLVYEYVNSGNLEQWLHGAMRQHGNLTWEARMKIITGTAQALAYLHEAIEPKVVHRDIKASNILIDDEFNAKLSDFGLAKLLDSGESHITTRVMGTFGYVAPEYANTGLLNEKSDIYSFGVLLLEAITGRDP--VDYGRPANEVNLVEW-LKMMVGTRRAEEVVDPRL 417          
BLAST of FC928214 vs. ExPASy Swiss-Prot
Match: Y1719_ARATH (Probable inactive receptor kinase At1g27190 OS=Arabidopsis thaliana GN=At1g27190 PE=1 SV=1)

HSP 1 Score: 101.293 bits (251), Expect = 7.123e-21
Identity = 75/253 (29.64%), Postives = 117/253 (46.25%), Query Frame = 2
Query:  107 FVTGVPKLKRSELEAACEDFS--NVIGSSPIGTVYKGTLSNGVEIXXXXXXXXXXKDWPKNLEVQFRKKIDTLSKVNHKNFVNLIGFCEEEEPFTRMMVFEYAPNGTLFEHIHIKE--SEHLDWGMRLRIAMGMAYCLEHMHQ-LNPPIAHNYLNSSAVHLTEDYAAKLSDL-------------SFWNEIAMAEMXXXXXXXXXXXXXXXXXNVYNFGVLLFEMVTGRLPYLVDN------GSLEDWAADYL 793
            F   + K+K  +L AA  +FS  N+  SS  G  YK  L +G  +                 E QFR +++ L ++ H N V L+G+C  E+   R++V+++  NGTLF  +H        LDW  R  I +G A  L  +H    PP  H +++S+ + L +D+ A+++D              S +N   + E+                 +VY FG++L E+VTG+ P  V N      GSL DW + YL
Sbjct:  282 FQKPIVKIKLGDLMAATNNFSSGNIDVSSRTGVSYKADLPDGSALAVKRLSACGFG------EKQFRSEMNKLGELRHPNLVPLLGYCVVEDE--RLLVYKHMVNGTLFSQLHNGGLCDAVLDWPTRRAIGVGAAKGLAWLHHGCQPPYLHQFISSNVILLDDDFDARITDYGLAKLVGSRDSNDSSFNNGDLGELGYVAPEYSSTMVASLKGDVYGFGIVLLELVTGQKPLSVINGVEGFKGSLVDWVSQYL 526          
BLAST of FC928214 vs. ExPASy Swiss-Prot
Match: SRF5_ARATH (Protein STRUBBELIG-RECEPTOR FAMILY 5 OS=Arabidopsis thaliana GN=SRF5 PE=2 SV=1)

HSP 1 Score: 100.908 bits (250), Expect = 9.303e-21
Identity = 70/246 (28.46%), Postives = 115/246 (46.75%), Query Frame = 2
Query:  137 SELEAACEDFS--NVIGSSPIGTVYKGTLSNGVEIXXXXXXXXXXKDWPKNLEVQFRKKIDTLSKVNHKNFVNLIGFCEEEEPFTRMMVFEYAPNGTLFEHIHIKE--SEHLDWGMRLRIAMGMAYCLEHMHQ-LNPPIAHNYLNSSAVHLTEDYAAKLSDLSFWNEIAMAEM----XXXXXXXXXXXXXXXXXNVYNFGVLLFEMVTGRLPYLVD----NGSLEDWAADYLSGVPPLQQFVDPTL 835
            S+L++A  +FS  N++G   IG VY+   S+G  +            +           + +LSK+ H+N   L+G+C E+     M+V+EY  NG+L E +H+ +  S+ L W  R+RIA+G A  +E++H+  +P + H  + SS + L  D   +LSD                                 +VY+FGV++ E++TGR+P+  +      SL  WA   L  +  L    DP L
Sbjct:  395 SDLQSATANFSPGNLLGEGSIGRVYRAKYSDGRTLAVKKIDSTL---FDSGKSEGITPIVMSLSKIRHQNIAELVGYCSEQGH--NMLVYEYFRNGSLHEFLHLSDCFSKPLTWNTRVRIALGTARAVEYLHEACSPSVMHKNIKSSNILLDADLNPRLSDYGLSKFYLRTSQNLGEGYNAPEARDPSAYTPKSDVYSFGVVMLELLTGRVPFDGEKPRPERSLVRWATPQLHDIDALSNIADPAL 635          
The following BLAST results are available for this feature:
BLAST of FC928214 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 211
Match NameE-valueIdentityDescription
ACCR3_ARATH2.892e-2229.96Putative serine/threonine-protein kinase-like prot... [more]
WAKLH_ARATH1.435e-2130.86Wall-associated receptor kinase-like 9 OS=Arabidop... [more]
SRF3_ARATH1.435e-2127.59Protein STRUBBELIG-RECEPTOR FAMILY 3 OS=Arabidopsi... [more]
Y5838_ARATH2.448e-2129.07Probably inactive leucine-rich repeat receptor-lik... [more]
Y2317_ARATH2.448e-2125.84Probable leucine-rich repeat receptor-like protein... [more]
Y1154_ARATH3.197e-2129.64Probable serine/threonine-protein kinase At1g01540... [more]
ACR4_ARATH3.197e-2127.89Serine/threonine-protein kinase-like protein ACR4 ... [more]
Y2296_ARATH7.123e-2129.25Probable receptor-like protein kinase At2g42960 OS... [more]
Y1719_ARATH7.123e-2129.64Probable inactive receptor kinase At1g27190 OS=Ara... [more]
SRF5_ARATH9.303e-2128.46Protein STRUBBELIG-RECEPTOR FAMILY 5 OS=Arabidopsi... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAP4YN02FM1 TF Citrus clementina cDNA clone KN0AAP4YN02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC928214 ID=FC928214; Name=FC928214; organism=Citrus clementina; type=EST; length=843bp
CGCCATACTTCTGGTTGCAACTGTGGGCATATATCTCTGCAGATGCAATA
AGGTATCTACTGTCAAACCTTGGGCCACAGGATTGAGCGGACAGCTTCAG
AAAGCATTTGTAACTGGTGTTCCAAAGCTTAAGAGATCCGAGCTTGAAGC
AGCTTGTGAAGATTTCAGTAATGTAATTGGTTCTTCACCGATTGGTACGG
TGTACAAAGGGACATTGTCTAATGGAGTTGAAATAGCTGTGGCCTCTGTC
TCAGTGGCATCTGCCAAGGATTGGCCTAAGAACTTAGAAGTGCAGTTTAG
GAAGAAGATTGACACGTTATCAAAAGTGAACCACAAAAATTTTGTCAATC
TTATTGGATTTTGTGAAGAAGAGGAGCCTTTCACAAGAATGATGGTGTTT
GAATATGCTCCTAATGGAACACTCTTTGAGCATATACACATTAAAGAATC
AGAGCACTTGGACTGGGGAATGAGGCTGCGGATTGCAATGGGTATGGCTT
ACTGCCTAGAGCATATGCATCAGCTGAACCCACCCATAGCCCACAATTAC
TTGAACTCTTCAGCTGTCCATCTGACTGAGGACTATGCAGCCAAATTATC
AGACTTAAGCTTCTGGAATGAGATAGCCATGGCTGAAATGGCAGCAACTA
GCAAAAAACTTTCAAGTGCACCCTCAGCAAGCCTTGAAAGCAACGTGTAC
AACTTTGGCGTATTATTATTTGAAATGGTAACGGGTAGGCTCCCTTATTT
GGTGGACAACGGCTCTCTAGAAGACTGGGCAGCTGATTATTTGAGTGGAG
TGCCACCCCTTCAACAATTTGTTGATCCAACTTTAACCTCTTT
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