FC928214

Overview
NameFC928214
Unique NameFC928214
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length843
Libraries
Library NameType
TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC928214 vs. ExPASy Swiss-Prot
Match: WAKLL_ARATH (Putative wall-associated receptor kinase-like 13 OS=Arabidopsis thaliana GN=WAKL13 PE=3 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 1.587e-20
Identity = 65/218 (29.82%), Postives = 110/218 (50.46%), Query Frame = 2
Query:  140 ELEAACEDFSN--VIGSSPIGTVYKGTLSNGVEIXXXXXXXXXXKDWPKNLEVQFRKKIDTLSKVNHKNFVNLIGFCEEEEPFTRMMVFEYAPNGTLFEHIHIKESEHLD-WGMRLRIAMGMAYCLEHMHQLN-PPIAHNYLNSSAVHLTEDYAAKLSDL----------SFWNEIAMAEMXXXXXXXXXXXXXXXXXNVYNFGVLLFEMVTGRLPYL 751
            ELE A ++F++  VIG    GTVYKG L +G  +              ++   +F  ++  LS++NH++ V L+G C E E    ++V+E+ PNG LF+H+H +  ++   WG+R+RIA+ ++    ++H     PI H  + S+ + L E Y AK+SD           + W  +    +                 +VY+FGV+L E++TG  P +
Sbjct:  446 ELEKATDNFNDNRVIGQGGQGTVYKGMLVDGRSVAVKKSNVVD-----EDKLQEFINEVIILSQINHRHVVKLLGCCLETE--VPILVYEFIPNGNLFQHLHEEFDDYTALWGVRMRIAVDISGAFSYLHTAACSPIYHRDIKSTNILLDEKYRAKVSDFGTSRSVSIDHTHWTTVISGTVGYVDPEYYGSSHFTEKSDVYSFGVVLVELITGEKPVI 656          
BLAST of FC928214 vs. ExPASy Swiss-Prot
Match: Y2706_ARATH (Probable receptor-like protein kinase At2g47060 OS=Arabidopsis thaliana GN=At2g47060 PE=2 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 2.072e-20
Identity = 80/264 (30.30%), Postives = 128/264 (48.48%), Query Frame = 2
Query:  119 VPKLKRSELEAACEDF--SNVIGSSPIGTVYKGTLSNGVEIXXXXXXXXXXKDWPKNLEVQFRKKIDTLSKVNHKNFVNLIGFCEEEEPFTRMMVFEYAPNGTLFEHIHIKESEH-------LDWGMRLRIAMGMAYCLEHMHQ-LNPPIAHNYLNSSAVHLTEDYAAKLSDLSFWNEI-----------AMAEMXXXXXXXXXXXXXXXXXNVYNFGVLLFEMVTGRLP--YLVDNG--SLEDWAADYLSGVPPLQQFVDPTL 835
            VP +  SEL+ A +DF  +++IG    G VY G L+N +             D  K  + +F  ++  +S++ H NFV L+G+C +    +R++ +E+A NG+L + +H ++          L W  R++IA+G A  LE++H+  NP I H  + SS V L ED  AK++D    N+             +                    +VY+FGV+L E++TGR P  + +  G  SL  WA   LS    ++Q VD  L
Sbjct:   58 VPIIPFSELKEATDDFGSNSLIGEGSYGRVYYGVLNNDLPSAIKKL------DSNKQPDNEFLAQVSMVSRLKHDNFVQLLGYCVDGN--SRILSYEFANNGSLHDILHGRKGVKGAQPGPVLSWYQRVKIAVGAARGLEYLHEKANPHIIHRDIKSSNVLLFEDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLTGRKPVDHRLPRGQQSLVTWATPKLS-EDKVKQCVDARL 312          
BLAST of FC928214 vs. ExPASy Swiss-Prot
Match: ACCR2_ARATH (Serine/threonine-protein kinase-like protein CCR2 OS=Arabidopsis thaliana GN=CCR2 PE=1 SV=1)

HSP 1 Score: 99.3673 bits (246), Expect = 2.707e-20
Identity = 69/235 (29.36%), Postives = 114/235 (48.51%), Query Frame = 2
Query:   95 LQKAFVTGVPKLKR-SELEAACEDFS--NVIGSSPIGTVYKGTLSNGVEIXXXXXXXXXXKDWPKNLEVQFRKKIDTLSKVNHKNFVNLIGFCEEEEPFTRMMVFEYAPNGTLFEHIHIKESEHLDWGMRLRIAMGMAYCLEHMH-QLNPPIAHNYLNSSAVHLTEDYAAKLSDLSFWNEIAMAEMXXXXXXXXXXXXXXXXXNVYNFGVLLFEMVTGR--LPYLVDNGSLEDWA 781
            L  A   G  K+ R SEL+ A   F   N +G    G VYK  LS+G+ +                    F  +++ L K+ H N VNL+G+C E     R++V+EY P+GTL +H+H  +   LDW MRL+I +  A  L+++H +++PPI H  + +S + L  +  A+++D    +                        +VY+FG++L E+++GR  +    D   + +WA
Sbjct:  495 LPTAVSLGETKIFRLSELKDATHGFKEFNELGRGSFGFVYKAVLSDGIHVAVKRANAATIIHSNNR---GFESELEILCKIRHNNIVNLLGYCSEMG--ERLLVYEYMPHGTLHDHLH-GDLSQLDWSMRLKIMLQAARGLDYLHNEVDPPIIHRDVKTSNILLDGEMCARIADFGLVSS-----------NERDSSNSDREGDVYDFGIVLLEILSGRKAIDRESDPAGIAEWA 712          
BLAST of FC928214 vs. ExPASy Swiss-Prot
Match: RKF3_ARATH (Probable LRR receptor-like serine/threonine-protein kinase RKF3 OS=Arabidopsis thaliana GN=RKF3 PE=1 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 3.535e-20
Identity = 78/285 (27.37%), Postives = 127/285 (44.56%), Query Frame = 2
Query:    2 AILLVATVGIYLCRCNKVSTVKPWATGLSGQLQKAF-----VTGVPKLKRSELEAACEDFS--NVIGSSPIGTVYKGTLSNGVEIXXXXXXXXXXKDWPKNLEVQFRKKIDTLSKVNHKNFVNLIGFCEEEEPFT---RMMVFEYAPNGTLFEHIHIKESEHLDWGMRLRIAMGMAYCLEHMHQ-LNPPIAHNYLNSSAVHLTEDYAAKLSD--LSFWNEIAMAE--------MXXXXXXXXXXXXXXXXXNVYNFGVLLFEMVTGRLPYLVDNG----SLEDWA 781
            A +LV T   + CR  K   +KP  T L    Q         T + K    E++ A  +FS  N+IG    G V+KG L +G ++          K+     +  F  +++ ++ + H N + L G+C    P+    R++V +   NG+L +H+       L W +R RIA+GMA  L ++H    P I H  + +S + L E + AK++D  L+ +N   M          M                 +VY+FGV+L E+++ R   + D      S+ DWA
Sbjct:  224 ASVLVITAWFWYCRRKKSKLLKPRDTSLEAGTQSRLDSMSESTTLVKFSFDEIKKATNNFSRHNIIGRGGYGNVFKGALPDGTQVAFKRF-----KNCSAGGDANFAHEVEVIASIRHVNLLALRGYCTATTPYEGHQRIIVCDLVSNGSLHDHLFGDLEAQLAWPLRQRIALGMARGLAYLHYGAQPSIIHRDIKASNILLDERFEAKVADFGLAKFNPEGMTHMSTRVAGTMGYVAPEYALYGQLTEKSDVYSFGVVLLELLSRRKAIVTDEEGQPVSVADWA 503          
BLAST of FC928214 vs. ExPASy Swiss-Prot
Match: SRF2_ARATH (Protein STRUBBELIG-RECEPTOR FAMILY 2 OS=Arabidopsis thaliana GN=SRF2 PE=2 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 4.617e-20
Identity = 73/253 (28.85%), Postives = 119/253 (47.04%), Query Frame = 2
Query:  137 SELEAACEDFS--NVIGSSPIGTVYKGTLSNGVEIXXXXXXXXXXKDWPKNLEVQFRKKIDTLSKVNHKNFVNLIGFCEEEEPFTRMMVFEYAPNGTLFEHIHIKESEHLDWGMRLRIAMGMAYCLEHMH-QLNPPIAHNYLNSSAVHLTEDYAAKLSDLSF--------------WNEIAMAEMXXXXXXXXXXXXXXXXXNVYNFGVLLFEMVTGRLPYLVDNGS------LEDWAADYLSGVPPLQQFVD 826
            +EL+ A   FS  N++G  P+G+VY+  L +G                  + E QF + + T SK+ H N V L+GFC E      ++V+EY  + +L+  +H +  + L WG+RLRIA+G+A  L+++H    PPIAH+ L ++ + L E+   +++D                  +EIA+                    + Y  GVLL E++TGR  +  D+        L  WA+  L     L+Q +D
Sbjct:  406 AELQLATNCFSEENLLGEGPLGSVYRAKLPDG---QFAVVRNIPMSSLSLHEEEQFTEVLQTASKLRHPNIVTLLGFCIENGE--HLLVYEYVGHLSLYNAMHDEVYKPLSWGLRLRIAIGVARALDYLHSSFCPPIAHSDLKATNILLDEELTPRIADCGLASLRPLTSNSVKLRASEIAIQNTGYIAPEHGQPGSSGTKSDTYALGVLLLELLTGRKAF--DSSRPRGEQLLVKWASTRLHDRRSLEQMID 651          
BLAST of FC928214 vs. ExPASy Swiss-Prot
Match: WAKLG_ARATH (Wall-associated receptor kinase-like 8 OS=Arabidopsis thaliana GN=WAKL8 PE=2 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 7.875e-20
Identity = 81/272 (29.78%), Postives = 130/272 (47.79%), Query Frame = 2
Query:    8 LLVATVGIYL-CRCNKVSTVKPWAT-------GLSGQLQKAFVTG----VPKLKRSELEAACEDF--SNVIGSSPIGTVYKGTLSNGVEIXXXXXXXXXXKDWPKNLEVQFRKKIDTLSKVNHKNFVNLIGFCEEEEPFTRMMVFEYAPNGTLFEHIH-IKESEHLDWGMRLRIAMGMAYCLEHMHQ-LNPPIAHNYLNSSAVHLTEDYAAKLSDLSFWNEIAMAE----------MXXXXXXXXXXXXXXXXXNVYNFGVLLFEMVTGRLP 745
            LL+   G++L C+ N+   V            GL  Q Q +F+ G          ++LE A + F  S ++G    GTVYKG L +G+ +          +    NLE +F  +I  LS++NH+N V ++G C E E    ++V+E+ PN  LF+H+H   E   + W +RL IA  +A  L ++H  ++ PI H  + S+ + L E + AK+SD      +A+ +          +                 +VY+FGVLL E++TG  P
Sbjct:  326 LLLLIFGMWLLCKANRKRKVAKQKRKFFQRNGGLLLQQQTSFLHGSVNRTKVFSSNDLENATDRFNASRILGQGGQGTVYKGMLEDGMIVAVKKSKALKEE----NLE-EFINEIILLSQINHRNVVKILGCCLETE--VPILVYEFIPNRNLFDHLHNPSEDFPMSWEVRLCIACEVADALSYLHSAVSIPIYHRDVKSTNILLDEKHRAKVSDFGISRSVAIDDTHLTTIVQGTIGYVDPEYLQSNHFTGKSDVYSFGVLLIELLTGEKP 590          
BLAST of FC928214 vs. ExPASy Swiss-Prot
Match: CRI4_MAIZE (Putative receptor protein kinase CRINKLY4 OS=Zea mays GN=CR4 PE=2 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 7.875e-20
Identity = 65/252 (25.79%), Postives = 123/252 (48.81%), Query Frame = 2
Query:  140 ELEAACEDFS--NVIGSSPIGTVYKGTLSNGVEIXXXXXXXXXXKDWPKNLEVQFRKKIDTLSKVNHKNFVNLIGFCEEEEPFTRMMVFEYAPNGTLFEHIHIKE---SEHLDWGMRLRIAMGMAYCLEHMH-QLNPPIAHNYLNSSAVHLTEDYAAKLSDLSF-----------WNEIAMAEMXXXXXXXXXXXXXXXXXNVYNFGVLLFEMVTGR--LPYLVDNGSLEDWAADYLSGVPPLQQFVDPTLT 838
            ELE A   FS  + +G      V+KG L +G  +              K    +F  ++D LS++NH + +NL+G+CE+     R++V+E+  +G+L++H+H K+    + L+W  R+ IA+  A  +E++H    PP+ H  + SS + + ED+ A+++D               +E+    +                 +VY+FGV+L E+++GR  +    + G++ +WA   +     +   +DP L+
Sbjct:  497 ELEQATGGFSEDSQVGKGSFSCVFKGILRDGTVVAVKRAIKASDV---KKSSKEFHNELDLLSRLNHAHLLNLLGYCEDGS--ERLLVYEFMAHGSLYQHLHGKDPNLKKRLNWARRVTIAVQAARGIEYLHGYACPPVIHRDIKSSNILIDEDHNARVADFGLSILGPADSGTPLSELPAGTLGYLDPEYYRLHYLTTKSDVYSFGVVLLEILSGRKAIDMQFEEGNIVEWAVPLIK-AGDIFAILDPVLS 742          
BLAST of FC928214 vs. ExPASy Swiss-Prot
Match: WAKLJ_ARATH (Wall-associated receptor kinase-like 10 OS=Arabidopsis thaliana GN=WAKL10 PE=2 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 1.029e-19
Identity = 69/214 (32.24%), Postives = 108/214 (50.47%), Query Frame = 2
Query:  140 ELEAACEDFS--NVIGSSPIGTVYKGTLSNGVEIXXXXXXXXXXKDWPKNLEVQFRKKIDTLSKVNHKNFVNLIGFCEEEEPFTRMMVFEYAPNGTLFEHIHIKESEHL--DWGMRLRIAMGMAYCLEHMHQL-NPPIAHNYLNSSAVHLTEDYAAKLSDL----------SFWNEIAMAEMXXXXXXXXXXXXXXXXXNVYNFGVLLFEMVTG 736
            ELE A E+FS   ++G    GTVYKG L +G  I          +D    LE +F  ++  LS++NH+N V L+G C E +    ++V+E+ PNG LFEH+H    ++    W +RLRIA+ +A  L ++H   + PI H  + S+ + L E + AK+SD           +    +    +                 +VY+FGV+L E++TG
Sbjct:  425 ELEKATENFSLTRILGEGGQGTVYKGMLVDG-RIVAVKKSKVVDED---KLE-EFINEVVILSQINHRNIVKLLGCCLETD--VPILVYEFIPNGNLFEHLHDDSDDYTMTTWEVRLRIAVDIAGALSYLHSAASSPIYHRDIKSTNIMLDEKHRAKVSDFGTSRTVTVDHTHLTTVVSGTVGYMDPEYFQSSQFTDKSDVYSFGVVLAELITG 631          
BLAST of FC928214 vs. ExPASy Swiss-Prot
Match: WAKLE_ARATH (Wall-associated receptor kinase-like 5 OS=Arabidopsis thaliana GN=WAKL5 PE=2 SV=2)

HSP 1 Score: 97.4413 bits (241), Expect = 1.029e-19
Identity = 70/216 (32.41%), Postives = 110/216 (50.93%), Query Frame = 2
Query:  140 ELEAACEDFS--NVIGSSPIGTVYKGTLSNGVEIXXXXXXXXXXKDWPKNLEVQFRKKIDTLSKVNHKNFVNLIGFCEEEEPFTRMMVFEYAPNGTLFEHIHIKESEH-LDWGMRLRIAMGMAYCLEHMHQLNP-PIAHNYLNSSAVHLTEDYAAKLSDLSFWNEIAMAE----------MXXXXXXXXXXXXXXXXXNVYNFGVLLFEMVTGRLP 745
            EL+ A ++FS   V+G    GTVYKG + +G +I          +D    LE +F  +I  LS++NH+N V LIG C E E    ++V+EY PNG +F+ +H +  ++ + W +RLRIA+ +A  L +MH     PI H  + ++ + L E Y AK+SD      + + +                            +VY+FGV+L E++TG  P
Sbjct:  424 ELKKATDNFSVKRVLGKGSQGTVYKGMMVDG-KIIAVKRSKVVDED---KLE-KFINEIILLSQINHRNIVKLIGCCLETE--VPILVYEYIPNGDMFKRLHDESDDYAMTWEVRLRIAIEIAGALTYMHSAASFPIYHRDIKTTNILLDEKYGAKVSDFGTSRSVTIDQTHLTTMVAGTFGYMDPEYFLSSQYTDKSDVYSFGVVLVELITGEKP 632          
BLAST of FC928214 vs. ExPASy Swiss-Prot
Match: SRF1_ARATH (Protein STRUBBELIG-RECEPTOR FAMILY 1 OS=Arabidopsis thaliana GN=SRF1 PE=2 SV=2)

HSP 1 Score: 97.4413 bits (241), Expect = 1.029e-19
Identity = 74/262 (28.24%), Postives = 120/262 (45.80%), Query Frame = 2
Query:  110 VTGVPKLKRSELEAACEDFS--NVIGSSPIGTVYKGTLSNGVEIXXXXXXXXXXKDWPKNLEV-QFRKKIDTLSKVNHKNFVNLIGFCEEEEPFTRMMVFEYAPNGTLFEHIHIKE--SEHLDWGMRLRIAMGMAYCLEHMHQL-NPPIAHNYLNSSAVHLTEDYAAKLSDLSFWNEIA----------MAEMXXXXXXXXXXXXXXXXXNVYNFGVLLFEMVTGRLPY--LVDNGS--LEDWAADYLSGVPPLQQFVDPTL 835
            +T V     + L+     FS  N+IG+  +G+VY+  L  G             K  P + E  +F + ++ + ++ H N V L+GFC E     R+++ EY  NGTL + +HI +     L W +R+RIA+  A  LE++H++ +PP  H    S+ + L +D    +SD      I+          +                    +VY+FGV++ E++TGR  Y    D G   L  WA   L  +  L + VDP+L
Sbjct:  460 LTAVKHFTVASLQQHTNSFSHENLIGTGMLGSVYRAELPGG----KLFAVRKLDKKSPNHEEEGKFLELVNNIDRIRHANIVQLVGFCSEHSQ--RLLIHEYCRNGTLHDLLHIDDRLKIELSWNVRVRIALEAAKALEYLHEICDPPSIHRNFKSANILLDDDIRVHVSDCGLAPLISSGAVSQLSGQLLAAYGYGAPEFEYGIYTMKCDVYSFGVVMLELLTGRKSYDKKRDRGEQFLVRWAIPQLHDIDALAKMVDPSL 715          
The following BLAST results are available for this feature:
BLAST of FC928214 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 211
Match NameE-valueIdentityDescription
WAKLL_ARATH1.587e-2029.82Putative wall-associated receptor kinase-like 13 O... [more]
Y2706_ARATH2.072e-2030.30Probable receptor-like protein kinase At2g47060 OS... [more]
ACCR2_ARATH2.707e-2029.36Serine/threonine-protein kinase-like protein CCR2 ... [more]
RKF3_ARATH3.535e-2027.37Probable LRR receptor-like serine/threonine-protei... [more]
SRF2_ARATH4.617e-2028.85Protein STRUBBELIG-RECEPTOR FAMILY 2 OS=Arabidopsi... [more]
WAKLG_ARATH7.875e-2029.78Wall-associated receptor kinase-like 8 OS=Arabidop... [more]
CRI4_MAIZE7.875e-2025.79Putative receptor protein kinase CRINKLY4 OS=Zea m... [more]
WAKLJ_ARATH1.029e-1932.24Wall-associated receptor kinase-like 10 OS=Arabido... [more]
WAKLE_ARATH1.029e-1932.41Wall-associated receptor kinase-like 5 OS=Arabidop... [more]
SRF1_ARATH1.029e-1928.24Protein STRUBBELIG-RECEPTOR FAMILY 1 OS=Arabidopsi... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAP4YN02FM1 TF Citrus clementina cDNA clone KN0AAP4YN02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC928214 ID=FC928214; Name=FC928214; organism=Citrus clementina; type=EST; length=843bp
CGCCATACTTCTGGTTGCAACTGTGGGCATATATCTCTGCAGATGCAATA
AGGTATCTACTGTCAAACCTTGGGCCACAGGATTGAGCGGACAGCTTCAG
AAAGCATTTGTAACTGGTGTTCCAAAGCTTAAGAGATCCGAGCTTGAAGC
AGCTTGTGAAGATTTCAGTAATGTAATTGGTTCTTCACCGATTGGTACGG
TGTACAAAGGGACATTGTCTAATGGAGTTGAAATAGCTGTGGCCTCTGTC
TCAGTGGCATCTGCCAAGGATTGGCCTAAGAACTTAGAAGTGCAGTTTAG
GAAGAAGATTGACACGTTATCAAAAGTGAACCACAAAAATTTTGTCAATC
TTATTGGATTTTGTGAAGAAGAGGAGCCTTTCACAAGAATGATGGTGTTT
GAATATGCTCCTAATGGAACACTCTTTGAGCATATACACATTAAAGAATC
AGAGCACTTGGACTGGGGAATGAGGCTGCGGATTGCAATGGGTATGGCTT
ACTGCCTAGAGCATATGCATCAGCTGAACCCACCCATAGCCCACAATTAC
TTGAACTCTTCAGCTGTCCATCTGACTGAGGACTATGCAGCCAAATTATC
AGACTTAAGCTTCTGGAATGAGATAGCCATGGCTGAAATGGCAGCAACTA
GCAAAAAACTTTCAAGTGCACCCTCAGCAAGCCTTGAAAGCAACGTGTAC
AACTTTGGCGTATTATTATTTGAAATGGTAACGGGTAGGCTCCCTTATTT
GGTGGACAACGGCTCTCTAGAAGACTGGGCAGCTGATTATTTGAGTGGAG
TGCCACCCCTTCAACAATTTGTTGATCCAACTTTAACCTCTTT
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