FC928214

Overview
NameFC928214
Unique NameFC928214
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length843
Libraries
Library NameType
TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC928214 vs. ExPASy Swiss-Prot
Match: PSKR2_ARATH (Phytosulfokine receptor 2 OS=Arabidopsis thaliana GN=PSKR2 PE=2 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 5.283e-16
Identity = 63/231 (27.27%), Postives = 106/231 (45.89%), Query Frame = 2
Query:  116 GVPKLKRSELEAACEDFS--NVIGSSPIGTVYKGTLSNGVEIXXXXXXXXXXKDWPKNLEVQFRKKIDTLSKVNHKNFVNLIGFCEEEEPFTRMMVFEYAPNGTL--FEHIHIKESEHLDWGMRLRIAMGMAYCLEHMHQL-NPPIAHNYLNSSAVHLTEDYAAKLSDLSFWNEI----------AMAEMXXXXXXXXXXXXXXXXXNVYNFGVLLFEMVTGRLPYLVDNG 763
            G   L   EL  +  +FS  N+IG    G VYK    +G +           +     +E +F+ +++ LS+  HKN V+L G+C+      R++++ +  NG+L  + H  +  +  L W +RL+IA G A  L ++H++  P + H  + SS + L E + A L+D      +           +  +                 +VY+FGV+L E+VTGR P  V  G
Sbjct:  738 GCKDLSVEELLKSTNNFSQANIIGCGGFGLVYKANFPDGSKAAVKRLSGDCGQ-----MEREFQAEVEALSRAEHKNLVSLQGYCKHGN--DRLLIYSFMENGSLDYWLHERVDGNMTLIWDVRLKIAQGAARGLAYLHKVCEPNVIHRDVKSSNILLDEKFEAHLADFGLARLLRPYDTHVTTDLVGTLGYIPPEYSQSLIATCRGDVYSFGVVLLELVTGRRPVEVCKG 961          
BLAST of FC928214 vs. ExPASy Swiss-Prot
Match: CRK40_ARATH (Cysteine-rich receptor-like protein kinase 40 OS=Arabidopsis thaliana GN=CRK40 PE=1 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 5.283e-16
Identity = 69/245 (28.16%), Postives = 115/245 (46.94%), Query Frame = 2
Query:  152 ACEDFS--NVIGSSPIGTVYKGTLSNGVEIXXXXXXXXXXKDWPKNLEVQFRKKIDTLSKVNHKNFVNLIGFCEEEEPFTRMMVFEYAPNGTLFEHIHIKESEH--LDWGMRLRIAMGMAYCLEHMHQLNP-PIAHNYLNSSAVHLTEDYAAKLSDLS----FWNEIAMAE-------MXXXXXXXXXXXXXXXXXNVYNFGVLLFEMVTGRLPYLVDNGSLEDWA-ADYLSGVPPLQQFVDPTL 835
            A +DFS  N +G    GTVYKGT  NG E+          +      +++F+ ++  L+++ HKN V L+GFC E +    ++V+E+ PN +L +H    E +   L W +R RI  G+A  L ++H+ +   I H  L +S + L  +   K++D      F ++   AE                         +VY+FGV+L EM++G      +   L  +A   ++ G P +   +DP L
Sbjct:  344 ATDDFSSENTLGQGGFGTVYKGTFPNGQEVAVKRLTKGSGQG-----DMEFKNEVSLLTRLQHKNLVKLLGFCNEGD--EEILVYEFVPNSSL-DHFIFDEDKRSLLTWEVRFRIIEGIARGLLYLHEDSQLKIIHRDLKASNILLDAEMNPKVADFGTARLFDSDETRAETKRIAGTRGYMAPEYLNHGQISAKSDVYSFGVMLLEMISGERNNSFEGEGLAAFAWKRWVEGKPEI--IIDPFL 578          
BLAST of FC928214 vs. ExPASy Swiss-Prot
Match: Y5597_ARATH (Probable receptor-like protein kinase At5g59700 OS=Arabidopsis thaliana GN=At5g59700 PE=2 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 6.899e-16
Identity = 66/243 (27.16%), Postives = 112/243 (46.09%), Query Frame = 2
Query:  161 DFSNVIGSSPIGTVYKGTLSNGVEIXXXXXXXXXXKDWPKNLE--VQFRKKIDTLSKVNHKNFVNLIGFCEEEEPFTRMMVFEYAPNGTLFEHIHIKESEHLDWGMRLRIAMGMAYCLEHMHQLN-PPIAHNYLNSSAVHLTEDYAAKLSDL-----------SFWNEIAMAEMXXXXXXXXXXXXXXXXXNVYNFGVLLFEMVTGRL---PYLV-DNGSLEDWAADYLSGVPPLQQFVDPTL 835
            D +  IG    G VYKG L +G ++             PK+ +   +FR +I+ LS+  H++ V+LIG+C+E      ++V+EY  NGTL  H++      L W  RL I +G A  L ++H  +  P+ H  + S+ + L E+  AK++D            +  +                        +VY+FGV++FE++  R    P L  +  +L +WA  +      L+  +DP+L
Sbjct:  483 DENRAIGVGGFGKVYKGELHDGTKVAVKRAN-------PKSQQGLAEFRTEIEMLSQFRHRHLVSLIGYCDENNEM--ILVYEYMENGTLKSHLYGSGLLSLSWKQRLEICIGSARGLHYLHTGDAKPVIHRDVKSANILLDENLMAKVADFGLSKTGPEIDQTHVSTAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVMFEVLCARPVIDPTLTREMVNLAEWAMKW-QKKGQLEHIIDPSL 715          
BLAST of FC928214 vs. ExPASy Swiss-Prot
Match: WAKLQ_ARATH (Wall-associated receptor kinase-like 20 OS=Arabidopsis thaliana GN=WAKL20 PE=2 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 6.899e-16
Identity = 65/221 (29.41%), Postives = 98/221 (44.34%), Query Frame = 2
Query:  140 ELEAACEDFS--NVIGSSPIGTVYKGTLSNGVEIXXXXXXXXXXKDWPKNLEVQFRKKIDTLSKVNHKNFVNLIGFCEEEEPFTRMMVFEYAPNGTLFEHIHIKES---EHLDWGMRLRIAMGMAYCLEHMHQ-LNPPIAHNYLNSSAVHLTEDYAAKLSDLSFWNEIAMAE---------------MXXXXXXXXXXXXXXXXXNVYNFGVLLFEMVTGR 739
            E+  A  +FS  N+IG+   G V+K  L +G             K        Q   ++  L +VNH++ V L+G C + E    ++++E+ PNGTLFEH+H       + L W  RL+IA   A  L ++H    PPI H  + SS + L E   AK+SD      + + E               +                 +VY+FGV+L EMVT +
Sbjct:  355 EITKATNNFSKDNLIGTGGFGEVFKAVLEDGTITAIKRAKLNNTKGTD-----QILNEVRILCQVNHRSLVRLLGCCVDLE--LPLLIYEFIPNGTLFEHLHGSSDRTWKPLTWRRRLQIAYQTAEGLAYLHSAAQPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVDLTETANNESHIFTGAQGTLGYLDPEYYRNFQLTDKSDVYSFGVVLLEMVTSK 568          
BLAST of FC928214 vs. ExPASy Swiss-Prot
Match: WAKLD_ARATH (Wall-associated receptor kinase-like 4 OS=Arabidopsis thaliana GN=WAKL4 PE=2 SV=2)

HSP 1 Score: 84.7297 bits (208), Expect = 6.899e-16
Identity = 60/217 (27.65%), Postives = 107/217 (49.31%), Query Frame = 2
Query:  137 SELEAACEDFSN--VIGSSPIGTVYKGTLSNGVEIXXXXXXXXXXKDWPKNLEVQFRKKIDTLSKVNHKNFVNLIGFCEEEEPFTRMMVFEYAPNGTLFEHIHIKESEH-LDWGMRLRIAMGMAYCLEHMHQ-LNPPIAHNYLNSSAVHLTEDYAAKLSDLSFWNEIAMAE----------MXXXXXXXXXXXXXXXXXNVYNFGVLLFEMVTGRLP 745
            +ELE A ++F+   V+G    GTVYKG L +G  +          K   ++   +F  ++  L+++NH+N V L+G C E E    ++V+E+ PNG L + +  +  ++ + W +RL IA+ +A  L ++H   + PI H  + ++ + L E Y  K+SD      + + +                            +VY+FGV+L E++TG+ P
Sbjct:  415 NELEKATDNFNTNRVLGQGGQGTVYKGMLVDGRIVAVKRS-----KAMDEDKVEEFINEVVVLAQINHRNIVKLLGCCLETE--VPVLVYEFVPNGDLCKRLRDECDDYIMTWEVRLHIAIEIAGALSYLHSAASFPIYHRDIKTTNILLDEKYQVKVSDFGTSRSVTIDQTHLTTQVAGTFGYVDPEYFQSSKFTDKSDVYSFGVVLVELITGKNP 624          
BLAST of FC928214 vs. ExPASy Swiss-Prot
Match: WAKLB_ARATH (Wall-associated receptor kinase-like 2 OS=Arabidopsis thaliana GN=WAKL2 PE=2 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 6.899e-16
Identity = 61/216 (28.24%), Postives = 106/216 (49.07%), Query Frame = 2
Query:  140 ELEAACEDFSN--VIGSSPIGTVYKGTLSNGVEIXXXXXXXXXXKDWPKNLEVQFRKKIDTLSKVNHKNFVNLIGFCEEEEPFTRMMVFEYAPNGTLFEHIHIKESEH-LDWGMRLRIAMGMAYCLEHMHQ-LNPPIAHNYLNSSAVHLTEDYAAKLSDLSFWNEIAMAE----------MXXXXXXXXXXXXXXXXXNVYNFGVLLFEMVTGRLP 745
            ELE A ++F+   V+G    GTVYKG L +G  +          K   ++   +F  ++  L+++NH+N V L+G C E E    ++V+E+ PNG L + +H +  ++ + W +RL IA+ +A  L ++H   + PI H  + ++ + L E   AK+SD      + + +                            +VY+FGV+L E++TG  P
Sbjct:  408 ELEKATDNFNKNRVLGQGGQGTVYKGMLVDGRIVAVKRS-----KAVDEDRVEEFINEVVVLAQINHRNIVKLLGCCLETE--VPVLVYEFVPNGDLCKRLHDESDDYTMTWEVRLHIAIEIAGALSYLHSAASFPIYHRDIKTTNILLDERNRAKVSDFGTSRSVTIDQTHLTTQVAGTFGYVDPEYFQSSKFTEKSDVYSFGVVLVELLTGEKP 616          
BLAST of FC928214 vs. ExPASy Swiss-Prot
Match: CRK30_ARATH (Putative cysteine-rich receptor-like protein kinase 30 OS=Arabidopsis thaliana GN=CRK30 PE=2 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 6.899e-16
Identity = 69/263 (26.24%), Postives = 113/263 (42.97%), Query Frame = 2
Query:    5 ILLVATVGIYLCRCNKVSTVKPWATGLSGQLQKAFVTGVPKLKRSELEAACEDF--SNVIGSSPIGTVYKGTLSNGVEIXXXXXXXXXXKDWPKNLEVQFRKKIDTLSKVNHKNFVNLIGFCEEEEPFTRMMVFEYAPNGT----LFEHIHIKESEHLDWGMRLRIAMGMAYCLEHMHQ-LNPPIAHNYLNSSAVHLTEDYAAKLSDLSFWNEI-----------AMAEMXXXXXXXXXXXXXXXXXNVYNFGVLLFEMVTGR 739
            I+ +  +G+ +CR  K      +    S         G  +    ++EAA  +F  SN IG    G VYKGTLSNG E+          +      E++F+ ++  ++K+ H+N V L+GF  + E   +++VFE+ PN +    LF   +  +   LDW  R  I  G+   L ++HQ     I H  + +S + L  D   K++D                   +                    +VY+FGVL+ E+V+GR
Sbjct:  298 IMALLALGVSVCRSRK-----KYQAFASETADDITTVGYLQFDIKDIEAATSNFLASNKIGQGGFGEVYKGTLSNGTEVAVKRLSRTSDQG-----ELEFKNEVLLVAKLQHRNLVRLLGFALQGE--EKILVFEFVPNKSLDYFLFGSTNPTKKGQLDWTRRYNIIGGITRGLLYLHQDSRLTIIHRDIKASNILLDADMNPKIADFGMARNFRDHQTEDSTGRVVGTFGYMPPEYVAHGQFSTKSDVYSFGVLILEIVSGR 548          
BLAST of FC928214 vs. ExPASy Swiss-Prot
Match: ANX1_ARATH (Receptor-like protein kinase ANXUR1 OS=Arabidopsis thaliana GN=ANX1 PE=2 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 6.899e-16
Identity = 69/245 (28.16%), Postives = 110/245 (44.90%), Query Frame = 2
Query:  161 DFSNVIGSSPIGTVYKGTLSNGVEIXXXXXXXXXXKDWPKNLEV--QFRKKIDTLSKVNHKNFVNLIGFCEEEEPFTRMMVFEYAPNGTLFEHIHIKESEHLDWGMRLRIAMGMAYCLEHMHQ-LNPPIAHNYLNSSAVHLTEDYAAKLSDLSF-----------WNEIAMAEMXXXXXXXXXXXXXXXXXNVYNFGVLLFEMVTGR------LPYLVDNGSLEDWAADYLSGVPPLQQFVDPTL 835
            D SNVIG    G VYKG +    ++          K  P + +   +F  +I+ LS++ HK+ V+LIG+C+E       +V++Y   GTL EH++  +   L W  RL IA+G A  L ++H      I H  + ++ + + E++ AK+SD                 +                      +VY+FGV+LFE++  R      LP   +  SL DWA +       L+  +DP L
Sbjct:  518 DDSNVIGVGGFGKVYKGVIDGTTKVAVK-------KSNPNSEQGLNEFETEIELLSRLRHKHLVSLIGYCDEGGEMC--LVYDYMAFGTLREHLYNTKKPQLTWKRRLEIAIGAARGLHYLHTGAKYTIIHRDVKTTNILVDENWVAKVSDFGLSKTGPNMNGGHVTTVVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLFEILCARPALNPSLP--KEQVSLGDWAMN-CKRKGNLEDIIDPNL 750          
BLAST of FC928214 vs. ExPASy Swiss-Prot
Match: Y5148_ARATH (Probable leucine-rich repeat receptor-like protein kinase At5g61480 OS=Arabidopsis thaliana GN=At5g61480 PE=1 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 9.011e-16
Identity = 64/246 (26.02%), Postives = 109/246 (44.31%), Query Frame = 2
Query:  170 NVIGSSPIGTVYKGTLSNGVEIXXXXXXXXXXKDWPKNLE---VQFRK-----KIDTLSKVNHKNFVNLIGFCEEEEPFTRMMVFEYAPNGTLFEHIHIKE---SEHLDWGMRLRIAMGMA--YCLEHMHQLNPPIAHNYLNSSAVHLTEDYAAKLSDLSFWN--------EIAMAEMXXXXXXXXXXXXXXXXXNVYNFGVLLFEMVTGRL---PYLVDNGSLEDWAADYLSGVPPLQQFVDPTL 835
            N++G    GTVYK  + NG  I          K W KN E   ++ RK     ++D L  V H+N V L+G C   +    M+++EY PNG+L + +H  +   +   +W    +IA+G+A   C  H H  +P I H  L  S + L  D+ A+++D              +                      ++Y++GV+L E++TG+    P   +  S+ DW    L     +++ +D ++
Sbjct:  723 NILGMGSTGTVYKAEMPNGEIIAVK-------KLWGKNKENGKIRRRKSGVLAEVDVLGNVRHRNIVRLLGCCTNRD--CTMLLYEYMPNGSLDDLLHGGDKTMTAAAEWTALYQIAIGVAQGICYLH-HDCDPVIVHRDLKPSNILLDADFEARVADFGVAKLIQTDESMSVVAGSYGYIAPEYAYTLQVDKKSDIYSYGVILLEIITGKRSVEPEFGEGNSIVDWVRSKLKTKEDVEEVLDKSM 958          
BLAST of FC928214 vs. ExPASy Swiss-Prot
Match: CRK10_ARATH (Cysteine-rich receptor-like protein kinase 10 OS=Arabidopsis thaliana GN=CRK10 PE=1 SV=2)

HSP 1 Score: 84.3445 bits (207), Expect = 9.011e-16
Identity = 71/250 (28.40%), Postives = 114/250 (45.60%), Query Frame = 2
Query:  143 LEAACEDF--SNVIGSSPIGTVYKGTLSNGVEIXXXXXXXXXXKDWPKNLEVQFRKKIDTLSKVNHKNFVNLIGFCEEEEPFTRMMVFEYAPNGTL-FEHIHIKESEHLDWGMRLRIAMGMAYCLEHMHQ-LNPPIAHNYLNSSAVHLTEDYAAKLSDLSFWNEIAMAE-----------MXXXXXXXXXXXXXXXXXNVYNFGVLLFEMVTGRLP---YLVDNG-SLEDWAADYLSGVPPLQQFVDPTL 835
            ++ A +DF  SN IG    G VYKGTLS+G E+          +      EV+F+ ++  ++K+ H+N V L+GFC + E   R++V+EY PN +L +      +   LDW  R +I  G+A  + ++HQ     I H  L +S + L  D   K++D        + +                             +VY+FGVL+ E+++G+     Y  D    L  +A    S   PL + VDP +
Sbjct:  330 IQTATDDFVESNKIGQGGFGEVYKGTLSDGTEVAVKRLSKSSGQG-----EVEFKNEVVLVAKLQHRNLVRLLGFCLDGE--ERVLVYEYVPNKSLDYFLFDPAKKGQLDWTRRYKIIGGVARGILYLHQDSRLTIIHRDLKASNILLDADMNPKIADFGMARIFGLDQTEENTSRIVGTYGYMSPEYAMHGQYSMKSDVYSFGVLVLEIISGKKNSSFYQTDGAHDLVSYAWGLWSNGRPL-ELVDPAI 571          
The following BLAST results are available for this feature:
BLAST of FC928214 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 211
Match NameE-valueIdentityDescription
PSKR2_ARATH5.283e-1627.27Phytosulfokine receptor 2 OS=Arabidopsis thaliana ... [more]
CRK40_ARATH5.283e-1628.16Cysteine-rich receptor-like protein kinase 40 OS=A... [more]
Y5597_ARATH6.899e-1627.16Probable receptor-like protein kinase At5g59700 OS... [more]
WAKLQ_ARATH6.899e-1629.41Wall-associated receptor kinase-like 20 OS=Arabido... [more]
WAKLD_ARATH6.899e-1627.65Wall-associated receptor kinase-like 4 OS=Arabidop... [more]
WAKLB_ARATH6.899e-1628.24Wall-associated receptor kinase-like 2 OS=Arabidop... [more]
CRK30_ARATH6.899e-1626.24Putative cysteine-rich receptor-like protein kinas... [more]
ANX1_ARATH6.899e-1628.16Receptor-like protein kinase ANXUR1 OS=Arabidopsis... [more]
Y5148_ARATH9.011e-1626.02Probable leucine-rich repeat receptor-like protein... [more]
CRK10_ARATH9.011e-1628.40Cysteine-rich receptor-like protein kinase 10 OS=A... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAP4YN02FM1 TF Citrus clementina cDNA clone KN0AAP4YN02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC928214 ID=FC928214; Name=FC928214; organism=Citrus clementina; type=EST; length=843bp
CGCCATACTTCTGGTTGCAACTGTGGGCATATATCTCTGCAGATGCAATA
AGGTATCTACTGTCAAACCTTGGGCCACAGGATTGAGCGGACAGCTTCAG
AAAGCATTTGTAACTGGTGTTCCAAAGCTTAAGAGATCCGAGCTTGAAGC
AGCTTGTGAAGATTTCAGTAATGTAATTGGTTCTTCACCGATTGGTACGG
TGTACAAAGGGACATTGTCTAATGGAGTTGAAATAGCTGTGGCCTCTGTC
TCAGTGGCATCTGCCAAGGATTGGCCTAAGAACTTAGAAGTGCAGTTTAG
GAAGAAGATTGACACGTTATCAAAAGTGAACCACAAAAATTTTGTCAATC
TTATTGGATTTTGTGAAGAAGAGGAGCCTTTCACAAGAATGATGGTGTTT
GAATATGCTCCTAATGGAACACTCTTTGAGCATATACACATTAAAGAATC
AGAGCACTTGGACTGGGGAATGAGGCTGCGGATTGCAATGGGTATGGCTT
ACTGCCTAGAGCATATGCATCAGCTGAACCCACCCATAGCCCACAATTAC
TTGAACTCTTCAGCTGTCCATCTGACTGAGGACTATGCAGCCAAATTATC
AGACTTAAGCTTCTGGAATGAGATAGCCATGGCTGAAATGGCAGCAACTA
GCAAAAAACTTTCAAGTGCACCCTCAGCAAGCCTTGAAAGCAACGTGTAC
AACTTTGGCGTATTATTATTTGAAATGGTAACGGGTAGGCTCCCTTATTT
GGTGGACAACGGCTCTCTAGAAGACTGGGCAGCTGATTATTTGAGTGGAG
TGCCACCCCTTCAACAATTTGTTGATCCAACTTTAACCTCTTT
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