FC928214

Overview
NameFC928214
Unique NameFC928214
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length843
Libraries
Library NameType
TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC928214 vs. ExPASy Swiss-Prot
Match: Y1755_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g07550 OS=Arabidopsis thaliana GN=At1g07550 PE=2 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 1.177e-15
Identity = 72/292 (24.66%), Postives = 133/292 (45.55%), Query Frame = 2
Query:    2 AILLVATVGIYLCRCNKVSTVKPWATGLSGQLQKAFVTGVPKLKRSELEAACEDFSNVIGSSPIGTVYKGTLSNGVEIXXXXXXXXXXKDWPKNLEVQFRKKIDTLSKVNHKNFVNLIGFCEEEEPFTRMMVFEYAPNGTLFEHIHIKES-EHLDWGMRLRIAMGMAYCLEHMHQ-LNPPIAHNYLNSSAVHLTEDYAAKLSDLS------FWNE----IAMAEMXXXXXXXXXXXXXXXXXNVYNFGVLLFEMVTGR--LPYLVDNGSLEDWAADYLSGVPPLQQFVDPTL 835
            AI+++  V I++ R  K S  K   +    + ++   + V K+  +        F  VIG    G VY+G L+N  E               K    +F+ +++ L +V+H+  V+LIG+C+++      +++E    G L EH+  K     L W +RL+IA+  A  +E++H    P I H  + S+ + L+E++ AK++D          NE    +                      +VY+FGV+L E+++G+  +    +N ++ +W +  L     ++  VDP L
Sbjct:  516 AIIILVLVLIFVLRRRKPSAGKVTRSSFKSENRRFTYSDVNKMTNN--------FQVVIGKGGFGVVYQGCLNN--EQAAIKVLSHSSAQGYK----EFKTEVELLLRVHHEKLVSLIGYCDDDNGLA--LIYELMGKGNLKEHLSGKPGCSVLSWPIRLKIALESAIGIEYLHTGCKPKIVHRDVKSTNILLSEEFEAKIADFGLSRSFLIGNEAQPTVVAGTFGYLDPEYHKTSLLSMKSDVYSFGVVLLEIISGQDVIDLSRENCNIVEWTSFILEN-GDIESIVDPNL 790          
BLAST of FC928214 vs. ExPASy Swiss-Prot
Match: WAK3_ARATH (Wall-associated receptor kinase 3 OS=Arabidopsis thaliana GN=WAK3 PE=2 SV=2)

HSP 1 Score: 83.9593 bits (206), Expect = 1.177e-15
Identity = 61/206 (29.61%), Postives = 100/206 (48.54%), Query Frame = 2
Query:  161 DFSNVIGSSPIGTVYKGTLSNGVEIXXXXXXXXXXKDWPKNLEVQFRKKIDTLSKVNHKNFVNLIGFCEEEEPFTRMMVFEYAPNGTLFEHIH--IKESEHLDWGMRLRIAMGMAYCLEHMH-QLNPPIAHNYLNSSAVHLTEDYAAKLSDLSFWNEIAM----------AEMXXXXXXXXXXXXXXXXXNVYNFGVLLFEMVTGR 739
            D S ++G    GTVYKG L +   +          +        QF  ++  LS++NH+N V ++G C E E    ++V+E+  NGTLF+H+H  I +S  L W  RLRIA+ +A  L ++H   + PI H  + ++ + L E+  AK++D      I M            +                 +VY+FGV+L E+++G+
Sbjct:  416 DESRILGQGGQGTVYKGILPDNTIVAIKKARLADSRQVD-----QFIHEVLVLSQINHRNVVKILGCCLETE--VPLLVYEFITNGTLFDHLHGSIFDSS-LTWEHRLRIAIEVAGTLAYLHSSASIPIIHRDIKTANILLDENLTAKVADFGASKLIPMDKEQLTTMVQGTLGYLDPEYYTTGLLNEKSDVYSFGVVLMELLSGQ 613          
BLAST of FC928214 vs. ExPASy Swiss-Prot
Match: SIRK_ARATH (Senescence-induced receptor-like serine/threonine-protein kinase OS=Arabidopsis thaliana GN=SIRK PE=2 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 1.177e-15
Identity = 62/232 (26.72%), Postives = 103/232 (44.40%), Query Frame = 2
Query:   80 GLSGQLQKAFVTGVPKLKRSELEAACEDFSNVIGSSPIGTVYKGTLSNGVEIXXXXXXXXXXKDWPKNLEVQFRKKIDTLSKVNHKNFVNLIGFCEEEEPFTRMMVFEYAPNGTLFEHIHIKESEHLDWGMRLRIAMGMAYCLEHMHQ-LNPPIAHNYLNSSAVHLTEDYAAKLSDL----SFWNE-------IAMAEMXXXXXXXXXXXXXXXXXNVYNFGVLLFEMVTGR 739
            G  G+      T     K SE+     +F  VIG    G VY G + NG ++          + +      +FR ++D L +V+H N  +L+G+C E      ++++EY  N  L +++  K S  L W  RL+I++  A  LE++H    PPI H  +  + + L E   AK++D     SF  E       +    +                 +VY+ GV+L E++TG+
Sbjct:  548 GTLGERNGPLKTAKRYFKYSEVVNITNNFERVIGKGGFGKVYHGVI-NGEQVAVKVLSEESAQGYK-----EFRAEVDLLMRVHHTNLTSLVGYCNEINHM--VLIYEYMANENLGDYLAGKRSFILSWEERLKISLDAAQGLEYLHNGCKPPIVHRDVKPTNILLNEKLQAKMADFGLSRSFSVEGSGQISTVVAGSIGYLDPEYYSTRQMNEKSDVYSLGVVLLEVITGQ 771          
BLAST of FC928214 vs. ExPASy Swiss-Prot
Match: CLV1_ARATH (Receptor protein kinase CLAVATA1 OS=Arabidopsis thaliana GN=CLV1 PE=1 SV=3)

HSP 1 Score: 83.9593 bits (206), Expect = 1.177e-15
Identity = 59/217 (27.19%), Postives = 100/217 (46.08%), Query Frame = 2
Query:  134 RSELEAACEDFSNVIGSSPIGTVYKGTLSNGVEIXXXXXXXXXXKDWPKNLEVQFRKKIDTLSKVNHKNFVNLIGFCEEEEPFTRMMVFEYAPNGTLFEHIHIKESEHLDWGMRLRIAMGMA--YCLEHMHQLNPPIAHNYLNSSAVHLTEDYAAKLSDL---SFWNEIAMAE--------MXXXXXXXXXXXXXXXXXNVYNFGVLLFEMVTGRLP 745
            +SE    C    N+IG    G VY+G++ N V++                 +  F  +I TL ++ H++ V L+G+   ++  T ++++EY PNG+L E +H  +  HL W  R R+A+  A   C  H H  +P I H  + S+ + L  D+ A ++D     F  + A +E                          +VY+FGV+L E++ G+ P
Sbjct:  684 KSEDVLECLKEENIIGKGGAGIVYRGSMPNNVDVAIKRLVGRGTG----RSDHGFTAEIQTLGRIRHRHIVRLLGYVANKD--TNLLLYEYMPNGSLGELLHGSKGGHLQWETRHRVAVEAAKGLCYLH-HDCSPLILHRDVKSNNILLDSDFEAHVADFGLAKFLVDGAASECMSSIAGSYGYIAPEYAYTLKVDEKSDVYSFGVVLLELIAGKKP 893          
BLAST of FC928214 vs. ExPASy Swiss-Prot
Match: Y5374_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At5g37450 OS=Arabidopsis thaliana GN=At5g37450 PE=2 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 1.537e-15
Identity = 51/168 (30.36%), Postives = 93/168 (55.36%), Query Frame = 2
Query:  137 SELEAACEDFSNV--IGSSPIGTVYKGTLSNGVEIXXXXXXXXXXKDWPKNLEVQFRKKIDTLSKVNHKNFVNLIGFCEEEEPFTRMMVFEYAPNGTLFEHIHIKESEHLDWGMRLRIAMGMAYCLEHMH-QLNPPIAHNYLNSSAVHLTEDYAAKLSDLSFWNEIAM 631
            +EL++A   FS++  IG    G VYKG L  G+ +          +      + +F  +I+ LS+++H+N V+L+G+C+++    +M+V+EY PNG+L + +  +  + L   +RLRIA+G A  + ++H + +PPI H  +  S + L      K++D      IA+
Sbjct:  622 TELDSATSSFSDLSQIGRGGYGKVYKGHLPGGLVVAVKRAEQGSLQG-----QKEFFTEIELLSRLHHRNLVSLLGYCDQKGE--QMLVYEYMPNGSLQDALSARFRQPLSLALRLRIALGSARGILYLHTEADPPIIHRDIKPSNILLDSKMNPKVADFGISKLIAL 782          
BLAST of FC928214 vs. ExPASy Swiss-Prot
Match: Y2214_ARATH (Probable receptor-like protein kinase At2g21480 OS=Arabidopsis thaliana GN=At2g21480 PE=2 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 2.007e-15
Identity = 68/253 (26.88%), Postives = 114/253 (45.06%), Query Frame = 2
Query:  137 SELEAACEDF--SNVIGSSPIGTVYKGTLSNGVEIXXXXXXXXXXKDWPKNLEVQFRKKIDTLSKVNHKNFVNLIGFCEEEEPFTRMMVFEYAPNGTLFEHIHIKESEHLDWGMRLRIAMGMAYCLEHMHQ-LNPPIAHNYLNSSAVHLTEDYAAKLSDLSFWNEIAMAE----------MXXXXXXXXXXXXXXXXXNVYNFGVLLFEMVTGR------LPYLVDNGSLEDWAADY-LSGVPPLQQFVDPTL 835
            SEL+   ++F  S +IG    G VY GT+ +G ++          +        +F  +I  LSK+ H++ V+LIG+C+E      ++V+EY  NG   +H++ K    L W  RL I +G A  L ++H      I H  + S+ + L E   AK++D     ++A  +                            +VY+FGV+L E +  R      LP   +  +L +WA  +   G+  L++ +DP L
Sbjct:  516 SELQEVTKNFDASEIIGVGGFGNVYIGTIDDGTQVAIKRGNPQSEQGI-----TEFHTEIQMLSKLRHRHLVSLIGYCDENAEM--ILVYEYMSNGPFRDHLYGKNLSPLTWKQRLEICIGAARGLHYLHTGTAQGIIHRDVKSTNILLDEALVAKVADFGLSKDVAFGQNHVSTAVKGSFGYLDPEYFRRQQLTDKSDVYSFGVVLLEALCARPAINPQLPR--EQVNLAEWAMLWKQKGL--LEKIIDPHL 757          
BLAST of FC928214 vs. ExPASy Swiss-Prot
Match: Y1561_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g56130 OS=Arabidopsis thaliana GN=At1g56130 PE=1 SV=2)

HSP 1 Score: 82.8037 bits (203), Expect = 2.622e-15
Identity = 63/214 (29.44%), Postives = 100/214 (46.73%), Query Frame = 2
Query:  137 SELEAACEDF--SNVIGSSPIGTVYKGTLSNGVEIXXXXXXXXXXKDWPKNLEVQFRKKIDTLSKVNHKNFVNLIGFCEEEEPFTRMMVFEYAPNGTLFEHIHIKESEHLDWGMRLRIAMGMAYCLEHMH-QLNPPIAHNYLNSSAVHLTEDYAAKLSDL----------SFWNEIAMAEMXXXXXXXXXXXXXXXXXNVYNFGVLLFEMVTGR 739
            SEL++A +DF  SN +G    G VYKG L++G  +          +      + QF  +I  +S V H+N V L G C E E   RM+V+EY PNG+L + +   ++ HLDW  R  I +G+A  L ++H + +  I H  + +S + L      ++SD           +  +      +                 +VY FGV+  E+V+GR
Sbjct:  685 SELKSATQDFDPSNKLGEGGFGPVYKGNLNDGRVVAVKLLSVGSRQG-----KGQFVAEIVAISSVLHRNLVKLYGCCFEGEH--RMLVYEYLPNGSLDQALFGDKTLHLDWSTRYEICLGVARGLVYLHEEASVRIVHRDVKASNILLDSRLVPQISDFGLAKLYDDKKTHISTRVAGTIGYLAPEYAMRGHLTEKTDVYAFGVVALELVSGR 891          
BLAST of FC928214 vs. ExPASy Swiss-Prot
Match: Y1357_ARATH (Probable receptor-like protein kinase At1g30570 OS=Arabidopsis thaliana GN=At1g30570 PE=1 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 2.622e-15
Identity = 75/264 (28.41%), Postives = 114/264 (43.18%), Query Frame = 2
Query:   56 STVKPWATGLSGQLQK-AFVTGVPKLKRSELEAACEDFSN--VIGSSPIGTVYKGTLSNGVEIXXXXXXXXXXKDWPKNLEVQFRKKIDTLSKVNHKNFVNLIGFCEEEEPFTRMMVFEYAPNGTLFEHIHIKESEHLDWGMRLRIAMGMAYCLEHMHQ-LNPPIAHNYLNSSAVHLTEDYAAKLSDL-----------SFWNEIAMAEMXXXXXXXXXXXXXXXXXNVYNFGVLLFEMVTGRL---PYL-VDNGSLEDWAADY 790
            ST    ATG S +L   A  T   K   +E+ AA ++F +   IG    G VY+G L +G  I          +        +F  +I  LS++ H++ V+LIGFC+E      ++V+EY  NGTL  H+       L W  RL   +G A  L ++H      I H  + ++ + L E++ AK+SD            +  +                        +VY+FGV+LFE V  R    P L  D  +L +WA  +
Sbjct:  483 STANAKATGGSLRLNTLAASTMGRKFTLAEIRAATKNFDDGLAIGVGGFGKVYRGELEDGTLIAIKRATPHSQQGL-----AEFETEIVMLSRLRHRHLVSLIGFCDEHNEM--ILVYEYMANGTLRSHLFGSNLPPLSWKQRLEACIGSARGLHYLHTGSERGIIHRDVKTTNILLDENFVAKMSDFGLSKAGPSMDHTHVSTAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLFEAVCARAVINPTLPKDQINLAEWALSW 739          
BLAST of FC928214 vs. ExPASy Swiss-Prot
Match: FEI2_ARATH (LRR receptor-like serine/threonine-protein kinase FEI 2 OS=Arabidopsis thaliana GN=FEI2 PE=1 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 2.622e-15
Identity = 58/213 (27.23%), Postives = 101/213 (47.42%), Query Frame = 2
Query:  140 ELEAACEDFSNVIGSSPIGTVYKGTLSNGVEIXXXXXXXXXXKDWPKNLEVQFRKKIDTLSKVNHKNFVNLIGFCEEEEPFTRMMVFEYAPNGTLFEHIHIKESEHLDWGMRLRIAMGMAYCLEHMHQ-LNPPIAHNYLNSSAVHLTEDYAAKLSDL----------SFWNEIAMAEMXXXXXXXXXXXXXXXXXNVYNFGVLLFEMVTGRLP 745
            +LE+  E+  ++IG    GTVYK ++ +G                 +  +  F ++++ L  + H+  VNL G+C    P +++++++Y P G+L E +H K  E LDW  R+ I +G A  L ++H   +P I H  + SS + L  +  A++SD           S    I                      +VY+FGVL+ E+++G+LP
Sbjct:  300 KLESLNEE--HIIGCGGFGTVYKLSMDDGNVFALKRIVKLN-----EGFDRFFERELEILGSIKHRYLVNLRGYCNS--PTSKLLLYDYLPGGSLDEALH-KRGEQLDWDSRVNIIIGAAKGLAYLHHDCSPRIIHRDIKSSNILLDGNLEARVSDFGLAKLLEDEESHITTIVAGTFGYLAPEYMQSGRATEKTDVYSFGVLVLEVLSGKLP 502          
BLAST of FC928214 vs. ExPASy Swiss-Prot
Match: CRK38_ARATH (Cysteine-rich receptor-like protein kinase 38 OS=Arabidopsis thaliana GN=CRK38 PE=2 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 2.622e-15
Identity = 64/211 (30.33%), Postives = 97/211 (45.97%), Query Frame = 2
Query:  152 ACEDFS--NVIGSSPIGTVYKGTLSNGVEIXXXXXXXXXXKDWPKNLEVQFRKKIDTLSKVNHKNFVNLIGFCEEEEPFTRMMVFEYAPNGTLFEHIHIKESE-HLDWGMRLRIAMGMAYCLEHMHQLNP-PIAHNYLNSSAVHLTEDYAAKLSDLSFWNEIAMAE-----------MXXXXXXXXXXXXXXXXXNVYNFGVLLFEMVTGR 739
            A +DFS  N IG    G+VYKG L  G EI          +      E++FR ++  L+++ H+N V L+GFC E +    ++V+E+ PN +L   I  +E    L W MR RI  G+A  L ++H+ +   I H  L +S + L      K++D        M +                             +VY+FGV+L EM+TGR
Sbjct:  335 ATDDFSFENKIGQGGFGSVYKGKLPGGEEIAVKRLTRGSGQG-----EIEFRNEVLLLTRLQHRNLVKLLGFCNEGD--EEILVYEFVPNSSLDHFIFDEEKRLLLTWDMRARIIEGVARGLVYLHEDSQLRIIHRDLKASNILLDAYMNPKVADFGMARLFNMDQTRAVTRKVVGTFGYMAPEYVRNRTFSVKTDVYSFGVVLLEMITGR 538          
The following BLAST results are available for this feature:
BLAST of FC928214 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 211
Match NameE-valueIdentityDescription
Y1755_ARATH1.177e-1524.66Probable LRR receptor-like serine/threonine-protei... [more]
WAK3_ARATH1.177e-1529.61Wall-associated receptor kinase 3 OS=Arabidopsis t... [more]
SIRK_ARATH1.177e-1526.72Senescence-induced receptor-like serine/threonine-... [more]
CLV1_ARATH1.177e-1527.19Receptor protein kinase CLAVATA1 OS=Arabidopsis th... [more]
Y5374_ARATH1.537e-1530.36Probable LRR receptor-like serine/threonine-protei... [more]
Y2214_ARATH2.007e-1526.88Probable receptor-like protein kinase At2g21480 OS... [more]
Y1561_ARATH2.622e-1529.44Probable LRR receptor-like serine/threonine-protei... [more]
Y1357_ARATH2.622e-1528.41Probable receptor-like protein kinase At1g30570 OS... [more]
FEI2_ARATH2.622e-1527.23LRR receptor-like serine/threonine-protein kinase ... [more]
CRK38_ARATH2.622e-1530.33Cysteine-rich receptor-like protein kinase 38 OS=A... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAP4YN02FM1 TF Citrus clementina cDNA clone KN0AAP4YN02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC928214 ID=FC928214; Name=FC928214; organism=Citrus clementina; type=EST; length=843bp
CGCCATACTTCTGGTTGCAACTGTGGGCATATATCTCTGCAGATGCAATA
AGGTATCTACTGTCAAACCTTGGGCCACAGGATTGAGCGGACAGCTTCAG
AAAGCATTTGTAACTGGTGTTCCAAAGCTTAAGAGATCCGAGCTTGAAGC
AGCTTGTGAAGATTTCAGTAATGTAATTGGTTCTTCACCGATTGGTACGG
TGTACAAAGGGACATTGTCTAATGGAGTTGAAATAGCTGTGGCCTCTGTC
TCAGTGGCATCTGCCAAGGATTGGCCTAAGAACTTAGAAGTGCAGTTTAG
GAAGAAGATTGACACGTTATCAAAAGTGAACCACAAAAATTTTGTCAATC
TTATTGGATTTTGTGAAGAAGAGGAGCCTTTCACAAGAATGATGGTGTTT
GAATATGCTCCTAATGGAACACTCTTTGAGCATATACACATTAAAGAATC
AGAGCACTTGGACTGGGGAATGAGGCTGCGGATTGCAATGGGTATGGCTT
ACTGCCTAGAGCATATGCATCAGCTGAACCCACCCATAGCCCACAATTAC
TTGAACTCTTCAGCTGTCCATCTGACTGAGGACTATGCAGCCAAATTATC
AGACTTAAGCTTCTGGAATGAGATAGCCATGGCTGAAATGGCAGCAACTA
GCAAAAAACTTTCAAGTGCACCCTCAGCAAGCCTTGAAAGCAACGTGTAC
AACTTTGGCGTATTATTATTTGAAATGGTAACGGGTAGGCTCCCTTATTT
GGTGGACAACGGCTCTCTAGAAGACTGGGCAGCTGATTATTTGAGTGGAG
TGCCACCCCTTCAACAATTTGTTGATCCAACTTTAACCTCTTT
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