FC928840
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC928840 vs. ExPASy Swiss-Prot
Match: PP437_ARATH (Putative pentatricopeptide repeat-containing protein At5g59900 OS=Arabidopsis thaliana GN=At5g59900 PE=3 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 7.157e-14 Identity = 46/154 (29.87%), Postives = 74/154 (48.05%), Query Frame = 1 Query: 16 GVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIPSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDERNVIPDASTLSIVVD 477 G+ + Y ID C+ G + AL + +L + Y+ LI+G CK G + A + L VVTY ++ C+ GK++KA L+ +M KG+AP F TL+ G R V+L + M E NV P+ T +++++ Sbjct: 397 GLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIE 550 HSP 2 Score: 77.7962 bits (190), Expect = 7.157e-14 Identity = 55/183 (30.05%), Postives = 81/183 (44.26%), Query Frame = 1 Query: 16 GVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILK---------CELDI--------------------------PSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDERNVIPDAST 459 G + Y I+GLCK G++ EA L ++ + C LDI +Y+ LI G C+ GR++ A EL + + D +TY MI+ LC + KA +L+ M KG+ PD VA+NTL+ GC E K EL + M + +IP+ T Sbjct: 712 GCVPNEVTYTAVINGLCKAGFVNEAEVLCSKMQPVSSVPNQVTYGCFLDILTKGEVDMQKAVELHNAILKGLLANTATYNMLIRGFCRQGRIEEASELITRMIGDGVSPDCITYTTMINELCRRNDVKKAIELWNSMTEKGIRPDRVAYNTLIHGCCVAGEMGKATELRNEMLRQGLIPNNKT 894 HSP 3 Score: 72.7886 bits (177), Expect = 2.302e-12 Identity = 48/182 (26.37%), Postives = 77/182 (42.31%), Query Frame = 1 Query: 16 GVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIPSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDERNVIPD----------------ASTLSIVVDLLVKNEISLNSI 513 G+ + Y + I+G CK G I A + K E + +Y+ L+ G C G++ A L+H + + + T+ ++ L G + A LF +M V P+ V +N ++ G + SK E L M E+ ++PD AS + VD L K LN I Sbjct: 432 GLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEI 613 HSP 4 Score: 68.5514 bits (166), Expect = 4.342e-11 Identity = 39/146 (26.71%), Postives = 70/146 (47.95%), Query Frame = 1 Query: 40 YRTFIDGLCKNGYIVEALELFRTLRILKCELDIPSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDERNVIPDASTLSIVVD 477 Y I+G C+ G + +A E + + D SY LI GLC +G+ A L +G + + Y ++H C +GK+++A + +M +GV D V + L+ G +++ + LL M +R + PD + ++D Sbjct: 545 YNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGSLKHKDRKLFFGLLKEMHDRGLKPDDVIYTSMID 690
BLAST of FC928840 vs. ExPASy Swiss-Prot
Match: PP431_ARATH (Pentatricopeptide repeat-containing protein At5g55740, chloroplastic OS=Arabidopsis thaliana GN=CRR21 PE=2 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 9.347e-14 Identity = 42/155 (27.10%), Postives = 88/155 (56.77%), Query Frame = 1 Query: 10 RHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIPSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDERNVIPDASTLSIVV 474 RH +D T +D K G IV+A ++F + E D+ ++ L+ +SG A LF+ + + +V+T+N++I +L +G++D+A D+FL M++ G+ P+ +++ T+M G ++N + + + L +M E + P+A ++++ + Sbjct: 403 RHSFESDIVLASTVMDMYAKCGSIVDAKKVFDST----VEKDLILWNTLLAAYAESGLSGEALRLFYGMQLEGVPPNVITWNLIILSLLRNGQVDEAKDMFLQMQSSGIIPNLISWTTMMNGMVQNGCSEEAILFLRKMQESGLRPNAFSITVAL 553
BLAST of FC928840 vs. ExPASy Swiss-Prot
Match: PP156_ARATH (Pentatricopeptide repeat-containing protein At2g16880 OS=Arabidopsis thaliana GN=At2g16880 PE=2 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 9.347e-14 Identity = 46/138 (33.33%), Postives = 74/138 (53.62%), Query Frame = 1 Query: 16 GVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIPSYSC--LIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHR 423 G+ D + + I G CK G + +A E + +K +Y+C L++GLCK G + A F++L + D VTYN MI A C D K+ +A+DL +ME KG+ PD +N+ + + + + S+ ELL + Sbjct: 551 GLLPDDSTFNSIILGYCKEGRVEKAFEFYN--ESIKHSFKPDNYTCNILLNGLCKEGMTEKALNFFNTLIEEREV-DTVTYNTMISAFCKDKKLKEAYDLLSEMEEKGLEPDRFTYNSFISLLMEDGKLSETDELLKK 685 HSP 2 Score: 74.3294 bits (181), Expect = 7.913e-13 Identity = 42/154 (27.27%), Postives = 77/154 (50.00%), Query Frame = 1 Query: 13 HGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIPSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDERNVIPDASTLSIVV 474 HG + D Y T I K G + ALE+ R + +++ + + ++D LCK +L A L +S + I D VTY +I + K++KA +++ +M+ + P FN+L+ G + +T +E + E ++PD ST + ++ Sbjct: 410 HGFSPDIVTYHTLIKAYLKVGDLSGALEMMREMGQKGIKMNTITLNTILDALCKERKLDEAHNLLNSAHKRGFIVDEVTYGTLIMGFFREEKVEKALEMWDEMKKVKITPTVSTFNSLIGGLCHHGKTELAMEKFDELAESGLLPDDSTFNSII 563 HSP 3 Score: 73.559 bits (179), Expect = 1.350e-12 Identity = 45/159 (28.30%), Postives = 81/159 (50.94%), Query Frame = 1 Query: 19 VAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIPSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDERNVIPDASTLSIVVDLLVKNE 495 V D Y T + + K G + + EL ++ + +Y+ L+ G CK G LK A+++ + + ++ D+ TYNI+I+ LC G M + +L M++ + PD V +NTL+ GC + + +L+ +M+ V + T +I + L K E Sbjct: 236 VNPDNVTYNTILKAMSKKGRLSDLKELLLDMKKNGLVPNRVTYNNLVYGYCKLGSLKEAFQIVELMKQTNVLPDLCTYNILINGLCNAGSMREGLELMDAMKSLKLQPDVVTYNTLIDGCFELGLSLEARKLMEQMENDGVKANQVTHNISLKWLCKEE 394 HSP 4 Score: 70.8626 bits (172), Expect = 8.749e-12 Identity = 42/163 (25.77%), Postives = 79/163 (48.47%), Query Frame = 1 Query: 10 RHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIPSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRM-DERNVIPDASTLSIVVDLLVKNE 495 + G D Y T I G + + +ALE++ ++ +K + +++ LI GLC G+ ++A E F L L+ D T+N +I C +G+++KA + + + PD N L+ G + T K + + + +ER V D T + ++ K++ Sbjct: 479 KRGFIVDEVTYGTLIMGFFREEKVEKALEMWDEMKKVKITPTVSTFNSLIGGLCHHGKTELAMEKFDELAESGLLPDDSTFNSIILGYCKEGRVEKAFEFYNESIKHSFKPDNYTCNILLNGLCKEGMTEKALNFFNTLIEEREV--DTVTYNTMISAFCKDK 639 HSP 5 Score: 70.4774 bits (171), Expect = 1.143e-11 Identity = 43/171 (25.15%), Postives = 82/171 (47.95%), Query Frame = 1 Query: 16 GVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIPSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDERNVIPDASTLSIVVDLLVKNEISLNSIPQFKS 528 G+ +T T +D LCK + EA L + +D +Y LI G + +++ A E++ + + + V T+N +I LC GK + A + F ++ G+ PD FN+++LG + K E + + + PD T +I+++ L K ++ ++ F + Sbjct: 446 GIKMNTITLNTILDALCKERKLDEAHNLLNSAHKRGFIVDEVTYGTLIMGFFREEKVEKALEMWDEMKKVKITPTVSTFNSLIGGLCHHGKTELAMEKFDELAESGLLPDDSTFNSIILGYCKEGRVEKAFEFYNESIKHSFKPDNYTCNILLNGLCKEGMTEKALNFFNT 616 HSP 6 Score: 70.0922 bits (170), Expect = 1.492e-11 Identity = 43/152 (28.29%), Postives = 81/152 (53.29%), Query Frame = 1 Query: 40 YRTFIDGLCKNGYIVEALELFRTLRILKCELDIPSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDM-EAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDERNVIPDASTLSIVVDLLVKN 492 + + I GLC +G A+E F L D +++ +I G CK GR++ A+E ++ + D T NI+++ LC +G +KA + F + E + V D V +NT++ ++ + + +LL M+E+ + PD T + + LL+++ Sbjct: 524 FNSLIGGLCHHGKTELAMEKFDELAESGLLPDDSTFNSIILGYCKEGRVEKAFEFYNESIKHSFKPDNYTCNILLNGLCKEGMTEKALNFFNTLIEEREV--DTVTYNTMISAFCKDKKLKEAYDLLSEMEEKGLEPDRFTYNSFISLLMED 673 HSP 7 Score: 68.5514 bits (166), Expect = 4.342e-11 Identity = 35/134 (26.12%), Postives = 72/134 (53.73%), Query Frame = 1 Query: 79 IVEALELFRTLRILKCELDIPSYSCLIDGLCKSGRLKIAWELFHSLPRGVLI-ADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDERNVIPDASTLSIVVD 477 I A E+F + + L++ +++ L++G C G+L+ A + + + D VTYN ++ A+ G++ +L LDM+ G+ P+ V +N L+ G + + +++ M + NV+PD T +I+++ Sbjct: 185 ISSAREVFDDMVKIGVSLNVQTFNVLVNGYCLEGKLEDALGMLERMVSEFKVNPDNVTYNTILKAMSKKGRLSDLKELLLDMKKNGLVPNRVTYNNLVYGYCKLGSLKEAFQIVELMKQTNVLPDLCTYNILIN 318 HSP 8 Score: 67.781 bits (164), Expect = 7.406e-11 Identity = 41/166 (24.70%), Postives = 78/166 (46.99%), Query Frame = 1 Query: 16 GVAADTWAYRTFIDGLCKNGYIVEALELF-RTLRILKCELDIPSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDERNVIPDASTLSIVVDLLVKNEISLNS 510 GV+ + + ++G C G + +AL + R + K D +Y+ ++ + K GRL EL + + L+ + VTYN +++ C G + +A + M+ V PD +N L+ G + +EL+ M + PD T + ++D + +SL + Sbjct: 199 GVSLNVQTFNVLVNGYCLEGKLEDALGMLERMVSEFKVNPDNVTYNTILKAMSKKGRLSDLKELLLDMKKNGLVPNRVTYNNLVYGYCKLGSLKEAFQIVELMKQTNVLPDLCTYNILINGLCNAGSMREGLELMDAMKSLKLQPDVVTYNTLIDGCFELGLSLEA 364
BLAST of FC928840 vs. ExPASy Swiss-Prot
Match: PPR9_ARATH (Pentatricopeptide repeat-containing protein At1g03560, mitochondrial OS=Arabidopsis thaliana GN=At1g03560 PE=2 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 1.221e-13 Identity = 45/170 (26.47%), Postives = 83/170 (48.82%), Query Frame = 1 Query: 16 GVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIPSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDERNVIPDASTLSIVVDLLVKNEISLNSIPQFK 525 G+ A+ I GLCK G + E +F + + ++ Y+ LIDG KSG ++ A L H + DVVTY+++++ LC +G++++A D F G+A + + +++L+ G + + L M E+ D+ + ++D K+ +I FK Sbjct: 322 GIQVPPHAFSLVIGGLCKEGKLNEGYTVFENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFHTCRFDGLAINSMFYSSLIDGLGKAGRVDEAERLFEEMSEKGCTRDSYCYNALIDAFTKHRKVDEAIALFK 491 HSP 2 Score: 76.2554 bits (186), Expect = 2.082e-13 Identity = 47/148 (31.76%), Postives = 71/148 (47.97%), Query Frame = 1 Query: 16 GVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIPSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDM-EAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDERNVIPDAS 456 G D Y ++GLCKNG + EAL+ F T R ++ YS LIDGL K+GR+ A LF + D YN +I A K+D+A LF M E +G + L+ G + + + ++L M ++ + P A+ Sbjct: 392 GFKPDVVTYSVVVNGLCKNGRVEEALDYFHTCRFDGLAINSMFYSSLIDGLGKAGRVDEAERLFEEMSEKGCTRDSYCYNALIDAFTKHRKVDEAIALFKRMEEEEGCDQTVYTYTILLSGMFKEHRNEEALKLWDMMIDKGITPTAA 539 HSP 3 Score: 75.8702 bits (185), Expect = 2.720e-13 Identity = 41/141 (29.08%), Postives = 74/141 (52.48%), Query Frame = 1 Query: 10 RHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIPSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDE 432 R G + Y IDG K+G + +A+ L + + D+ +YS +++GLCK+GR++ A + FH+ L + + Y+ +I L G++D+A LF +M KG D +N L+ ++ + + + L RM+E Sbjct: 355 RKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFHTCRFDGLAINSMFYSSLIDGLGKAGRVDEAERLFEEMSEKGCTRDSYCYNALIDAFTKHRKVDEAIALFKRMEE 495 HSP 4 Score: 68.9366 bits (167), Expect = 3.324e-11 Identity = 42/151 (27.81%), Postives = 72/151 (47.68%), Query Frame = 1 Query: 37 AYRTFIDGLCKNGYIVEALELFRTLRILKCELDIPSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDERNVIPDASTLSIVVDLLVK 489 A I K G + E L ++R ++ E + +Y+ L++GL + + A +F + G + D+VTYN MI C G+ KA + DME +G D + + T++ C +++ V L MDE+ + S+V+ L K Sbjct: 189 AANALIKSFGKLGMVEELLWVWRKMKENGIEPTLYTYNFLMNGLVSAMFVDSAERVFEVMESGRIKPDIVTYNTMIKGYCKAGQTQKAMEKLRDMETRGHEADKITYMTMIQACYADSDFGSCVALYQEMDEKGIQVPPHAFSLVIGGLCK 339
BLAST of FC928840 vs. ExPASy Swiss-Prot
Match: PPR77_ARATH (Pentatricopeptide repeat-containing protein At1g52620 OS=Arabidopsis thaliana GN=At1g52620 PE=2 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 1.221e-13 Identity = 43/161 (26.71%), Postives = 77/161 (47.83%), Query Frame = 1 Query: 7 RRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIPSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDERNVIPDASTLSIVVDLLVK 489 + G+ W ID ++GY V+ E + C+ D+ +Y+ LI+ LCK G+ ++A + LI + ++Y +I A C + D A L L M +G PD V + L+ G + + V + ++ +R V PDA+ ++++ L K Sbjct: 302 KERGLRVSVWFLNNIIDAKYRHGYKVDPAESIGWIIANDCKPDVATYNILINRLCKEGKKEVAVGFLDEASKKGLIPNNLSYAPLIQAYCKSKEYDIASKLLLQMAERGCKPDIVTYGILIHGLVVSGHMDDAVNMKVKLIDRGVSPDAAIYNMLMSGLCK 462 HSP 2 Score: 75.485 bits (184), Expect = 3.552e-13 Identity = 57/221 (25.79%), Postives = 91/221 (41.18%), Query Frame = 1 Query: 16 GVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIPSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDERNVIPDASTLSIVVDLLVKNEISLNSIPQFKSQRXXXXXXXXXXXXXA*KPDLEDPILINTCKGVLSNVGMFLGSVHGFCLQ 678 G D Y I GL +G++ +A+ + L D Y+ L+ GLCK+GR A LF + ++ D Y +I G D+A +F KGV D V N ++ G R+ + + ++RM+E +++PD T S ++D VK + +I F+ N CK NV + ++GFC Q Sbjct: 410 GCKPDIVTYGILIHGLVVSGHMDDAVNMKVKLIDRGVSPDAAIYNMLMSGLCKTGRFLPAKLLFSEMLDRNILPDAYVYATLIDGFIRSGDFDEARKVFSLSVEKGVKVDVVHHNAMIKGFCRSGMLDEALACMNRMNEEHLVPDKFTYSTIIDGYVKQQDMATAIKIFRYMEK------------------------NKCK---PNVVTYTSLINGFCCQ 603
BLAST of FC928840 vs. ExPASy Swiss-Prot
Match: PP447_ARATH (Putative pentatricopeptide repeat-containing protein At5g65820 OS=Arabidopsis thaliana GN=At5g65820 PE=3 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 1.221e-13 Identity = 45/158 (28.48%), Postives = 76/158 (48.10%), Query Frame = 1 Query: 16 GVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIPSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDERNVIPDASTLSIVVDLLVK 489 G D Y + G G + +A +L R +R E + Y+ LI LCK R++ A ++F + R ADVVTY ++ C GK+DK + + DM KG+ P + + +M+ + + +EL+ +M + PD ++V+ L K Sbjct: 282 GFEPDIVDYTNLLSGYANAGKMADAYDLLRDMRRRGFEPNANCYTVLIQALCKVDRMEEAMKVFVEMERYECEADVVTYTALVSGFCKWGKIDKCYIVLDDMIKKGLMPSELTYMHIMVAHEKKESFEECLELMEKMRQIEYHPDIGIYNVVIRLACK 439
BLAST of FC928840 vs. ExPASy Swiss-Prot
Match: PP298_ARATH (Pentatricopeptide repeat-containing protein At4g01400, mitochondrial OS=Arabidopsis thaliana GN=At4g01400 PE=2 SV=2) HSP 1 Score: 77.0258 bits (188), Expect = 1.221e-13 Identity = 44/149 (29.53%), Postives = 73/149 (48.99%), Query Frame = 1 Query: 4 TRRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIPSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDERNVIPD 450 +R HGV +T +Y + C N + A +LF + D+ SY LI G C+ G++ A EL + + D ++Y ++++LC ++ +A+ L M+ KG PD V +NT++LG R + MD R V+ D Sbjct: 181 SRLHGVMPNTRSYNLLMQAFCLNDDLSIAYQLFGKMLERDVVPDVDSYKILIQGFCRKGQVNGAMELLDDMLNKGFVPDRLSYTTLLNSLCRKTQLREAYKLLCRMKLKGCNPDLVHYNTMILGFCREDRA---------MDARKVLDD 320 HSP 2 Score: 73.1738 bits (178), Expect = 1.763e-12 Identity = 40/126 (31.75%), Postives = 68/126 (53.97%), Query Frame = 1 Query: 73 GYIVEALELFRTLRILKCELDIPSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDERNVIPD 450 GY+ +A ELF++ R+ + SY+ L+ C + L IA++LF + ++ DV +Y I+I C G+++ A +L DM KG PD +++ TL+ R + + +LL RM + PD Sbjct: 169 GYLQKAFELFKSSRLHGVMPNTRSYNLLMQAFCLNDDLSIAYQLFGKMLERDVVPDVDSYKILIQGFCRKGQVNGAMELLDDMLNKGFVPDRLSYTTLLNSLCRKTQLREAYKLLCRMKLKGCNPD 294
BLAST of FC928840 vs. ExPASy Swiss-Prot
Match: PP187_ARATH (Pentatricopeptide repeat-containing protein At2g36240 OS=Arabidopsis thaliana GN=At2g36240 PE=2 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 1.221e-13 Identity = 46/151 (30.46%), Postives = 82/151 (54.30%), Query Frame = 1 Query: 40 YRTFIDGLCKNGYIVEALELFRTL-RILKCELDIPSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDERNVIPDASTLSIVVDLLVK 489 +R+ ID C+ + AL F T+ R++ + ++ Y+ +++G KSG + A + + + DV T+NI+I+ C K D A DLF +M+ KG P+ V+FNTL+ G + + + + V++ + M E +T I+VD L + Sbjct: 160 FRSAIDAYCRARKMDYALLAFDTMKRLIDGKPNVGVYNTVVNGYVKSGDMDKALRFYQRMGKERAKPDVCTFNILINGYCRSSKFDLALDLFREMKEKGCEPNVVSFNTLIRGFLSSGKIEEGVKMAYEMIELGCRFSEATCEILVDGLCR 310 HSP 2 Score: 67.781 bits (164), Expect = 7.406e-11 Identity = 39/168 (23.21%), Postives = 79/168 (47.02%), Query Frame = 1 Query: 7 RRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIPSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDERNVIPDASTLSIVVDLLVKNEISLNS 510 + G + ++ T I G +G I E +++ + L C + L+DGLC+ GR+ A L L ++ Y ++ LC + K +A ++ ++ KG P +A TL+ G ++ T K + +M ++PD+ T ++++ L ++ S ++ Sbjct: 255 KEKGCEPNVVSFNTLIRGFLSSGKIEEGVKMAYEMIELGCRFSEATCEILVDGLCREGRVDDACGLVLDLLNKRVLPSEFDYGSLVEKLCGENKAVRAMEMMEELWKKGQTPCFIACTTLVEGLRKSGRTEKASGFMEKMMNAGILPDSVTFNLLLRDLCSSDHSTDA 422
BLAST of FC928840 vs. ExPASy Swiss-Prot
Match: PPR50_ARATH (Putative pentatricopeptide repeat-containing protein At1g19290 OS=Arabidopsis thaliana GN=At1g19290 PE=3 SV=2) HSP 1 Score: 76.2554 bits (186), Expect = 2.082e-13 Identity = 47/163 (28.83%), Postives = 86/163 (52.76%), Query Frame = 1 Query: 40 YRTFIDGLCKNGYIVEALELFRTLRILKCELDIP---SYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDERNVIPDA---STLSIVVDLLVKNEISLNS 510 Y I GLCK G + +A +LF L L + IP +Y+ LI G +G + A+ L + +I ++VTYN +I LC G +D+A L + KG+ P+ + +NTL+ G +++ ++ + L +M E+ ++ + + I ++++ E+ L S Sbjct: 722 YNVAIAGLCKAGKLEDARKLFSDL--LSSDRFIPDEYTYTILIHGCAIAGDINKAFTLRDEMALKGIIPNIVTYNALIKGLCKLGNVDRAQRLLHKLPQKGITPNAITYNTLIDGLVKSGNVAEAMRLKEKMIEKGLVRGSDKQGDVDIPKEVVLDPEVKLGS 882 HSP 2 Score: 73.9442 bits (180), Expect = 1.033e-12 Identity = 41/153 (26.80%), Postives = 77/153 (50.33%), Query Frame = 1 Query: 16 GVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIPSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDERNVIPDASTLSIVV 474 GV+ + Y + I G CK G + EA +F L+ K D Y L+DG C++G+++ A + ++ + + N +I+ C G++ +A +F M + PD +NTL+ G R + ++L +M ++ V+P T +I++ Sbjct: 291 GVSRNVVTYTSLIKGYCKKGLMEEAEHVFELLKEKKLVADQHMYGVLMDGYCRTGQIRDAVRVHDNMIEIGVRTNTTICNSLINGYCKSGQLVEAEQIFSRMNDWSLKPDHHTYNTLVDGYCRAGYVDEALKLCDQMCQKEVVPTVMTYNILL 443 HSP 3 Score: 73.559 bits (179), Expect = 1.350e-12 Identity = 42/160 (26.25%), Postives = 84/160 (52.50%), Query Frame = 1 Query: 16 GVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIPSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDERNVIPDASTLSIVVDLLVKNE 495 GV +T + I+G CK+G +VEA ++F + + D +Y+ L+DG C++G + A +L + + ++ V+TYNI++ G L+ M +GV D ++ +TL+ + + ++ ++L + R ++ D TL++++ L K E Sbjct: 361 GVRTNTTICNSLINGYCKSGQLVEAEQIFSRMNDWSLKPDHHTYNTLVDGYCRAGYVDEALKLCDQMCQKEVVPTVMTYNILLKGYSRIGAFHDVLSLWKMMLKRGVNADEISCSTLLEALFKLGDFNEAMKLWENVLARGLLTDTITLNVMISGLCKME 520 HSP 4 Score: 68.1662 bits (165), Expect = 5.671e-11 Identity = 46/157 (29.30%), Postives = 74/157 (47.13%), Query Frame = 1 Query: 19 VAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIPSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDERNVIPDASTLSIVVDLLVK 489 + AD Y +DG C+ G I +A+ + + + + + LI+G CKSG+L A ++F + L D TYN ++ C G +D+A L M K V P + +N L+ G R V+ L M +R V D + S +++ L K Sbjct: 327 LVADQHMYGVLMDGYCRTGQIRDAVRVHDNMIEIGVRTNTTICNSLINGYCKSGQLVEAEQIFSRMNDWSLKPDHHTYNTLVDGYCRAGYVDEALKLCDQMCQKEVVPTVMTYNILLKGYSRIGAFHDVLSLWKMMLKRGVNADEISCSTLLEALFK 483
BLAST of FC928840 vs. ExPASy Swiss-Prot
Match: PP299_ARATH (Pentatricopeptide repeat-containing protein At4g01570 OS=Arabidopsis thaliana GN=At4g01570 PE=2 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 2.082e-13 Identity = 48/175 (27.43%), Postives = 86/175 (49.14%), Query Frame = 1 Query: 13 HGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIPSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDERNVIPDASTLSIVVDLLVKNEISLNS--IPQFKSQ 531 +G DT Y +DG K + EA +LF + +Y+ LIDGL ++GR + + LF L + D +T++I+ LC +GK++ A L +ME +G + D V ++L++G + +L+ + E N++P+ + V+ +K S + P F S+ Sbjct: 353 NGFVPDTIVYNCLLDGTLKARKVTEACQLFEKMVQEGVRASCWTYNILIDGLFRNGRAEAGFTLFCDLKKKGQFVDAITFSIVGLQLCREGKLEGAVKLVEEMETRGFSVDLVTISSLLIGFHKQGRWDWKEKLMKHIREGNLVPNVLRWNAGVEASLKRPQSKDKDYTPMFPSK 527 HSP 2 Score: 73.559 bits (179), Expect = 1.350e-12 Identity = 43/150 (28.67%), Postives = 74/150 (49.33%), Query Frame = 1 Query: 16 GVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIPSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDERNVIPDASTLS 465 G D YR I G CK+ + +A+ ++ ++ D Y+CL+DG K+ ++ A +LF + + + A TYNI+I L +G+ + LF D++ KG D + F+ + L R + V+L+ M+ R D T+S Sbjct: 319 GHEPDNSTYRILIQGCCKSYRMDDAMRIYGEMQYNGFVPDTIVYNCLLDGTLKARKVTEACQLFEKMVQEGVRASCWTYNILIDGLFRNGRAEAGFTLFCDLKKKGQFVDAITFSIVGLQLCREGKLEGAVKLVEEMETRGFSVDLVTIS 468 HSP 3 Score: 70.8626 bits (172), Expect = 8.749e-12 Identity = 46/161 (28.57%), Postives = 77/161 (47.83%), Query Frame = 1 Query: 28 DTWAYRTFIDGLCKNGYIVEALELFRTLRILKCEL------DIPSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDERNVIPDASTLSIVVDLLVKN 492 DTW+Y I G G + AL LF+ ++ DI +Y+ LI LC G+ K A ++ L D TY I+I C +MD A ++ +M+ G PD + +N L+ G ++ + ++ +L +M + V T +I++D L +N Sbjct: 247 DTWSYNICIHGFGCWGDLDAALSLFKEMKERSSVYGSSFGPDICTYNSLIHVLCLFGKAKDALIVWDELKVSGHEPDNSTYRILIQGCCKSYRMDDAMRIYGEMQYNGFVPDTIVYNCLLDGTLKARKVTEACQLFEKMVQEGVRASCWTYNILIDGLFRN 407 HSP 4 Score: 67.3958 bits (163), Expect = 9.673e-11 Identity = 43/148 (29.05%), Postives = 66/148 (44.59%), Query Frame = 1 Query: 28 DTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIPSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDERNVIPDASTLSIV 471 D Y + I LC G +AL ++ L++ E D +Y LI G CKS R+ A ++ + + D + YN ++ K+ +A LF M +GV C +N L+ G RN L + ++ DA T SIV Sbjct: 288 DICTYNSLIHVLCLFGKAKDALIVWDELKVSGHEPDNSTYRILIQGCCKSYRMDDAMRIYGEMQYNGFVPDTIVYNCLLDGTLKARKVTEACQLFEKMVQEGVRASCWTYNILIDGLFRNGRAEAGFTLFCDLKKKGQFVDAITFSIV 435 The following BLAST results are available for this feature:
BLAST of FC928840 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 136
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Sequences
The
following sequences are available for this feature:
EST sequence >FC928840 ID=FC928840; Name=FC928840; organism=Citrus clementina; type=EST; length=758bpback to top |