FC928840
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC928840 vs. ExPASy Swiss-Prot
Match: PPR18_ARATH (Pentatricopeptide repeat-containing protein At1g06710, mitochondrial OS=Arabidopsis thaliana GN=At1g06710 PE=2 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 2.720e-13 Identity = 51/165 (30.91%), Postives = 79/165 (47.88%), Query Frame = 1 Query: 40 YRTFIDGLCKNGYIVEALELFRTLRILKCELDIPSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDERNVIPDASTLSIVVDLLVKN---EISLNSIPQFK 525 Y IDGLCK G + EA E+ + + +YS LID K R +A ++ + +VV Y MI LC GK D+A+ L ME KG P+ V + ++ G + +ELL RM + V P+ T +++D KN +++ N + + K Sbjct: 677 YDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMK 841 HSP 2 Score: 75.0998 bits (183), Expect = 4.639e-13 Identity = 43/154 (27.92%), Postives = 76/154 (49.35%), Query Frame = 1 Query: 16 GVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIPSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDERNVIPDASTLSIVVD 477 GV + +F LC G +A + R + D +YS +++ LC + ++++A+ LF + RG L+ADV TY IM+ + C G +++A F +M G P+ V + L+ ++ + S EL M +P+ T S ++D Sbjct: 443 GVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALID 596 HSP 3 Score: 70.8626 bits (172), Expect = 8.749e-12 Identity = 45/177 (25.42%), Postives = 83/177 (46.89%), Query Frame = 1 Query: 7 RRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIPSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLF-----------LDMEAK-----GVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDERNVIPDASTLSIVVDLLVK 489 +R G+ AD + Y +D CK G I +A + F +R + C ++ +Y+ LI K+ ++ A ELF ++ + ++VTY+ +I C G+++KA +F +DM K P+ V + L+ G +++ + +LL M P+ ++D L K Sbjct: 510 KRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCK 686 HSP 4 Score: 67.781 bits (164), Expect = 7.406e-11 Identity = 39/145 (26.90%), Postives = 71/145 (48.97%), Query Frame = 1 Query: 16 GVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIPSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDERNVIPD 450 G DT Y ++ LC + A LF ++ D+ +Y+ ++D CK+G ++ A + F+ + +VVTY +IHA K+ A++LF M ++G P+ V ++ L+ G + + K ++ RM +PD Sbjct: 478 GFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPD 622
BLAST of FC928840 vs. ExPASy Swiss-Prot
Match: PPR67_ARATH (Putative pentatricopeptide repeat-containing protein At1g31840 OS=Arabidopsis thaliana GN=At1g31840 PE=3 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 3.552e-13 Identity = 44/153 (28.76%), Postives = 75/153 (49.02%), Query Frame = 1 Query: 16 GVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIPSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDERNVIPDASTLSIVV 474 G++ + Y I GLC++G I EA ++ + E I +YS LIDG CK G L+ + L+ + + DVV Y +++ L G M A + M + + + V FN+L+ G R N + +++ M + PD +T + V+ Sbjct: 386 GISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVM 538 HSP 2 Score: 69.707 bits (169), Expect = 1.949e-11 Identity = 52/201 (25.87%), Postives = 89/201 (44.28%), Query Frame = 1 Query: 16 GVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIPSYSCLIDGLCKSGRLKIAWELF-HSLPRGVLI----------------------------------ADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDERNVIPDASTLSIVVDLLVKNEISLNSI 513 G A + + T I+G CK G + A +LF+ + E D+ +YS LIDG K+G L + +LF +L +GV + +VVTY I+I LC DG++ +A ++ + +G+ P V +++L+ G + L M + PD ++VD L K + L+++ Sbjct: 281 GPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAM 481
BLAST of FC928840 vs. ExPASy Swiss-Prot
Match: PP275_ARATH (Pentatricopeptide repeat-containing protein At3g49730 OS=Arabidopsis thaliana GN=At3g49730 PE=2 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 3.552e-13 Identity = 44/159 (27.67%), Postives = 76/159 (47.80%), Query Frame = 1 Query: 16 GVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIPSYSCLIDGLCKSG-RLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDERNVIPDASTLSIVVDLLVK 489 G+ D + + G G + +A +L +R E ++ Y+ LI LC++ R+ A +F + R AD+VTY +I C G +DK + + DM KGV P V + +M+ + + + +EL+ +M R PD ++V+ L K Sbjct: 266 GLEPDIVVFTNLLSGYAHAGKMADAYDLMNDMRKRGFEPNVNCYTVLIQALCRTEKRMDEAMRVFVEMERYGCEADIVTYTALISGFCKWGMIDKGYSVLDDMRKKGVMPSQVTYMQIMVAHEKKEQFEECLELIEKMKRRGCHPDLLIYNVVIRLACK 424
BLAST of FC928840 vs. ExPASy Swiss-Prot
Match: PP199_ARATH (Pentatricopeptide repeat-containing protein At2g41720 OS=Arabidopsis thaliana GN=EMB2654 PE=2 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 3.552e-13 Identity = 44/145 (30.34%), Postives = 70/145 (48.28%), Query Frame = 1 Query: 7 RRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIPSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDERNV 441 R+ V AD+ + I G C+ EA+ + + L L YS ++ K G++ A +F+ + DV+ Y M+HA A K KA +LFL+MEA G+ PD +A + LM + + S V L+ M E+ + Sbjct: 522 RKKKVKADSVTFTILISGSCRMSKYPEAISYLKEMEDLSIPLTKEVYSSVLCAYSKQGQVTEAESIFNQMKMAGCEPDVIAYTSMLHAYNASEKWGKACELFLEMEANGIEPDSIACSALMRAFNKGGQPSNVFVLMDLMREKEI 666
BLAST of FC928840 vs. ExPASy Swiss-Prot
Match: PP152_ARATH (Pentatricopeptide repeat-containing protein At2g15630, mitochondrial OS=Arabidopsis thaliana GN=At2g15630 PE=2 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 3.552e-13 Identity = 44/160 (27.50%), Postives = 78/160 (48.75%), Query Frame = 1 Query: 16 GVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIPSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDERNVIPDASTLSIVVDLLVKNE 495 G+ + Y + I LC+ EA ELF + + D+ + L+DG C G + A+ L + + D VTYN ++ LC +GK ++A +L +M+ +G+ PD +++NTL+ G + +T + M P T + ++ L KN+ Sbjct: 427 GIQPTQFTYTSLIYVLCRKNKTREADELFEKVVGKGMKPDLVMMNTLMDGHCAIGNMDRAFSLLKEMDMMSINPDDVTYNCLMRGLCGEGKFEEARELMGEMKRRGIKPDHISYNTLISGYSKKGDTKHAFMVRDEMLSLGFNPTLLTYNALLKGLSKNQ 586 HSP 2 Score: 74.3294 bits (181), Expect = 7.913e-13 Identity = 48/155 (30.97%), Postives = 71/155 (45.81%), Query Frame = 1 Query: 10 RHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIPSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDERNVIPDASTLSIVV 474 + G+ + Y T I GL I A L R +R LD +Y+ LI+G C+ G K A+ L + + TY +I+ LC K +A +LF + KG+ PD V NTLM G + LL MD ++ PD T + ++ Sbjct: 355 KQGMVPTFYTYNTLIHGLFMENKIEAAEILIREIREKGIVLDSVTYNILINGYCQHGDAKKAFALHDEMMTDGIQPTQFTYTSLIYVLCRKNKTREADELFEKVVGKGMKPDLVMMNTLMDGHCAIGNMDRAFSLLKEMDMMSINPDDVTYNCLM 509 HSP 3 Score: 73.559 bits (179), Expect = 1.350e-12 Identity = 42/156 (26.92%), Postives = 73/156 (46.79%), Query Frame = 1 Query: 16 GVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIPSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDERNVIPDASTLSIVVDLL 483 G+ D T +DG C G + A L + + ++ D +Y+CL+ GLC G+ + A EL + R + D ++YN +I G A + +M + G P + +N L+ G +N E ELL M ++P+ S+ V++ + Sbjct: 462 GMKPDLVMMNTLMDGHCAIGNMDRAFSLLKEMDMMSINPDDVTYNCLMRGLCGEGKFEEARELMGEMKRRGIKPDHISYNTLISGYSKKGDTKHAFMVRDEMLSLGFNPTLLTYNALLKGLSKNQEGELAEELLREMKSEGIVPNDSSFCSVIEAM 617
BLAST of FC928840 vs. ExPASy Swiss-Prot
Match: PPR22_ARATH (Pentatricopeptide repeat-containing protein At1g08610 OS=Arabidopsis thaliana GN=At1g08610 PE=2 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 4.639e-13 Identity = 41/149 (27.52%), Postives = 75/149 (50.34%), Query Frame = 1 Query: 13 HGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIPSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDERNVIPDAST 459 HG+ +T Y T + LC + Y E E+ + + +Y+ LI+GLCK+ L A + F+ + + D+VTYN ++ A+ +G +D A +L ++ P + +N+++ G + K +EL H+M + + PD T Sbjct: 308 HGLELNTVTYNTLLHSLCSHEYWDEVEEILNIMYQTSYCPTVITYNILINGLCKARLLSRAIDFFYQMLEQKCLPDIVTYNTVLGAMSKEGMVDDAIELLGLLKNTCCPPGLITYNSVIDGLAKKGLMKKALELYHQMLDAGIFPDDIT 456 HSP 2 Score: 67.781 bits (164), Expect = 7.406e-11 Identity = 37/151 (24.50%), Postives = 77/151 (50.99%), Query Frame = 1 Query: 40 YRTFIDGLCKNGYIVEALELFRTLRILKCELDIPSYSCLIDGLCKSGRLK-IAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDERNVIPDASTLSIVVDLLVK 489 Y ++ +C+ A+E+ + + C DI +Y+ L++ C+ G L+ +A + H L G+ + + VTYN ++H+LC+ D+ ++ M P + +N L+ G + S+ ++ ++M E+ +PD T + V+ + K Sbjct: 247 YTVLVELVCRYCGSARAIEVLEDMAVEGCYPDIVTYNSLVNYNCRRGNLEEVASVIQHILSHGLEL-NTVTYNTLLHSLCSHEYWDEVEEILNIMYQTSYCPTVITYNILINGLCKARLLSRAIDFFYQMLEQKCLPDIVTYNTVLGAMSK 396 HSP 3 Score: 67.3958 bits (163), Expect = 9.673e-11 Identity = 44/152 (28.95%), Postives = 70/152 (46.05%), Query Frame = 1 Query: 40 YRTFIDGLCKNGYIVEALELFRTLRILKCELDIPSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDERNVIPDASTLSIVVDLLVKNE 495 Y I+GLCK + A++ F + KC DI +Y+ ++ + K G + A EL L ++TYN +I L G M KA +L+ M G+ PD + +L+ G R N + ++L R ST +V+ L K + Sbjct: 352 YNILINGLCKARLLSRAIDFFYQMLEQKCLPDIVTYNTVLGAMSKEGMVDDAIELLGLLKNTCCPPGLITYNSVIDGLAKKGLMKKALELYHQMLDAGIFPDDITRRSLIYGFCRANLVEEAGQVLKETSNRGNGIRGSTYRLVIQGLCKKK 503
BLAST of FC928840 vs. ExPASy Swiss-Prot
Match: PP325_ARATH (Pentatricopeptide repeat-containing protein At4g19440, chloroplastic OS=Arabidopsis thaliana GN=At4g19440 PE=2 SV=2) HSP 1 Score: 75.0998 bits (183), Expect = 4.639e-13 Identity = 42/150 (28.00%), Postives = 75/150 (50.00%), Query Frame = 1 Query: 46 TFIDGLCKNGYIVEALELFRTLRILKCELDIPSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDERNVIPDASTLSIVVDLLVKNE 495 T I GLCK+G +ALEL+ +D + + L+ GLC++G+L A+ + + + D V+YN +I C K+D+A +M +G+ PD ++ L+ G N+ + ++ ++PD T S+++D K E Sbjct: 488 TLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAE 637 HSP 2 Score: 72.4034 bits (176), Expect = 3.007e-12 Identity = 43/156 (27.56%), Postives = 76/156 (48.72%), Query Frame = 1 Query: 7 RRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIPSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDERNVIPDASTLSIVV 474 +R+G+ D + Y IDG CK E E F + + + Y+ LI C+SGRL +A EL + + + TY +I + ++++A LF +M +G+ P+ + L+ G + + KV LL M +NV P+ T ++++ Sbjct: 615 KRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMI 770 HSP 3 Score: 68.9366 bits (167), Expect = 3.324e-11 Identity = 40/153 (26.14%), Postives = 73/153 (47.71%), Query Frame = 1 Query: 16 GVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIPSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDERNVIPDASTLSIVV 474 G D +Y T I G C + EA + + D +YS LI GL +++ A + + R ++ DV TY++MI C + ++ + F +M +K V P+ V +N L+ R+ S +EL M + + P+++T + ++ Sbjct: 548 GCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLI 700 HSP 4 Score: 67.3958 bits (163), Expect = 9.673e-11 Identity = 40/145 (27.59%), Postives = 68/145 (46.90%), Query Frame = 1 Query: 16 GVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIPSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDERNVIPD 450 G DT + GLC+ G + EA + + + C +D SY+ LI G C +L A+ + + L D TY+I+I L K+++A + D + G+ PD ++ ++ GC + T + E M +NV P+ Sbjct: 513 GFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPN 657
BLAST of FC928840 vs. ExPASy Swiss-Prot
Match: PP236_ARATH (Pentatricopeptide repeat-containing protein At3g16010 OS=Arabidopsis thaliana GN=At3g16010 PE=2 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 6.059e-13 Identity = 56/210 (26.67%), Postives = 93/210 (44.29%), Query Frame = 1 Query: 19 VAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIPSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDERNVIPDASTLSIVVDLLVKNEISLNSIPQFKSQRXXXXXXXXXXXXXA*KPDLEDPILINTCKGVLSNVGMF 648 V+ + Y IDG CK + +AL L + +Y LI+ L K+ R + A ELF L Y +MI GK+ +A DLF +M+ +G PD A+N LM G ++ ++ LL +M+E D ++ +I+++ + + +I F++ + KP D + NT G ++ GMF Sbjct: 405 VSPSEFTYSILIDGYCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLINALGKAKRYEAANELFKELKENFGNVSSRVYAVMIKHFGKCGKLSEAVDLFNEMKNQGSGPDVYAYNALMSGMVKAGMINEANSLLRKMEENGCRADINSHNIILNGFARTGVPRRAIEMFETIKHSGI-----------KP---DGVTYNTLLGCFAHAGMF 600
BLAST of FC928840 vs. ExPASy Swiss-Prot
Match: PPR41_ARATH (Putative pentatricopeptide repeat-containing protein At1g13630 OS=Arabidopsis thaliana GN=At1g13630 PE=3 SV=2) HSP 1 Score: 74.3294 bits (181), Expect = 7.913e-13 Identity = 43/145 (29.66%), Postives = 75/145 (51.72%), Query Frame = 1 Query: 40 YRTFIDGLCKNGYIVEALELFRTLRILKCELDIPSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDERNVIPDASTLSIVV 474 Y T +DGLC+ + +A+ RT + S++ ++ G CK G + +A F ++ + L+ V ++NI+I+ LC G + +A +L DM GV PD V +N L G S E++ M ++ + PD T +I++ Sbjct: 204 YSTVVDGLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSGYCKLGFVDMAKSFFCTVLKCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGFHLLGMISGAWEVIRDMLDKGLSPDVITYTILL 348 HSP 2 Score: 70.8626 bits (172), Expect = 8.749e-12 Identity = 51/171 (29.82%), Postives = 80/171 (46.78%), Query Frame = 1 Query: 16 GVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELD-IPSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDERNVIPDASTLSIVVDLLVKNEISLNSIPQFK 525 G++ D Y + G C+ G I L L + + EL+ I S ++ GLCK+GR+ A LF+ + L D+V Y+I+IH LC GK D A L+ +M K + P+ L+LG + + LL + D +IV+D K+ ++ FK Sbjct: 336 GLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIPCSVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEALELFK 506 HSP 3 Score: 68.1662 bits (165), Expect = 5.671e-11 Identity = 46/184 (25.00%), Postives = 80/184 (43.48%), Query Frame = 1 Query: 16 GVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIPSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTY------------------------------------NIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDERNVIPDAST 459 G+ +++ I+GLC G I EALEL + E D +Y+ L G G + AWE+ + L DV+TY ++M+ LC G++D+A LF M+A G++PD VA++ ++ G + + + L M ++ ++P++ T Sbjct: 266 GLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGFHLLGMISGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIPCSVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSRT 449 HSP 4 Score: 68.1662 bits (165), Expect = 5.671e-11 Identity = 42/138 (30.43%), Postives = 67/138 (48.55%), Query Frame = 1 Query: 58 GLCKNGYIVEALELFRTLRILKCELDIPSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDERNVIPDASTLSIV 471 GLC+ G ++EA L +L LDI Y+ +IDG KSG ++ A ELF + + V T+N +I+ C + +A + ++ G+AP V++ TLM T + EL M + P T S++ Sbjct: 456 GLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAYANCGNTKSIDELRREMKAEGIPPTNVTYSVI 593
BLAST of FC928840 vs. ExPASy Swiss-Prot
Match: PP139_ARATH (Pentatricopeptide repeat-containing protein At2g01390 OS=Arabidopsis thaliana GN=At2g01390/At2g01380 PE=2 SV=2) HSP 1 Score: 74.3294 bits (181), Expect = 7.913e-13 Identity = 44/146 (30.14%), Postives = 75/146 (51.37%), Query Frame = 1 Query: 7 RRHGVAADTWAYRTFIDGLCKNGYIVEALELFRTLRILKCELDIPSYSCLIDGLCKSGRLKIAWELFHSLPRGVLIADVVTYNIMIHALCADGKMDKAHDLFLDMEAKGVAPDCVAFNTLMLGCIRNNETSKVVELLHRMDERNVI 444 + GV DT Y + I + +G + A+ L+ +R CE + SY+ + L GR++ A E++ + R + + TY +++ L A GK ++A D+F M+ GV PD A N L+ ++ ETS + +L M E V+ Sbjct: 149 KEKGVLIDTVTYTSLIHWVSSSGDVDGAMRLWEEMRDNGCEPTVVSYTAYMKMLFADGRVEEATEVYKEMLRSRVSPNCHTYTVLMEYLVATGKCEEALDIFFKMQEIGVQPDKAACNILIAKALKFGETSFMTRVLVYMKENGVV 294 The following BLAST results are available for this feature:
BLAST of FC928840 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 136
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Sequences
The
following sequences are available for this feature:
EST sequence >FC928840 ID=FC928840; Name=FC928840; organism=Citrus clementina; type=EST; length=758bpback to top |