FC928862

Overview
NameFC928862
Unique NameFC928862
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length804
Libraries
Library NameType
PhII-IIIV1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC928862 vs. ExPASy Swiss-Prot
Match: PMO25_SCHPO (Mo25-like protein OS=Schizosaccharomyces pombe GN=pmo25 PE=2 SV=1)

HSP 1 Score: 119.398 bits (298), Expect = 2.353e-26
Identity = 68/203 (33.50%), Postives = 115/203 (56.65%), Query Frame = 2
Query:  194 MKGLFKSKPRTPVDIVRQTRDLIIYANRSADVRESKREDKMAELCKNIRELKSILYGNSESEPVSEACAQLTAEFFRENTLRLLITCLPKLNLEARKDATQVVANLQRQQVHSKLIASDYLEANIDLLDILIAGYENTDMALHYGAMLRECIRHQSVARYVLESQHMKKFFDYIQLPNFDIAADAAATFKELLTRHKSTVAEF 802
            M  LF  +P++  D+VR   D +     + D ++S       E+ K ++ L+  L G +E EP ++  + L+ + ++ N   LL+  LPKL  E++KD   + + L R+ V S+    DY+ A+  +  +L++ Y   ++A   G++LREC RH+++   +L S+    FF  IQ  +FD+A+DA +TFK +L  HKS VAEF
Sbjct:    1 MSFLFNKRPKSTQDVVRCLCDNLPKLEINNDKKKS-----FEEVSKCLQNLRVSLCGTAEVEPDADLVSDLSFQIYQSNLPFLLVRYLPKLEFESKKDTGLIFSALLRRHVASRYPTVDYMLAHPQIFPVLVSYYRYQEVAFTAGSILRECSRHEALNEVLLNSRDFWTFFSLIQASSFDMASDAFSTFKSILLNHKSQVAEF 198          
BLAST of FC928862 vs. ExPASy Swiss-Prot
Match: DEE76_CHLPR (Degreening-related gene dee76 protein OS=Chlorella protothecoides GN=DEE76 PE=2 SV=1)

HSP 1 Score: 115.546 bits (288), Expect = 3.397e-25
Identity = 62/171 (36.26%), Postives = 99/171 (57.89%), Query Frame = 2
Query:  293 ESKREDKMAELCKNIRELKSILYGNSESEPVSEACAQLTAEFFRENTLRLLITCLPKLNLEARKDATQVVANLQRQQVHSK-LIASDYLEANIDLLDILIAGYENTDMALHYGAMLRECIRHQSVARYVLESQHMKKFFDYIQLPNFDIAADAAATFKELLTRHKSTVAEF 802
            ESK++  + ++ K I  +K  ++G  E     E    + +E  R   +  L+T L  L+ E RKD  Q+   + R  +        DY+ A+ D+L  L  GYE+ ++AL+ G M RECIRH+ +A++VLE    ++ F+ + + +F++A+DA ATFK+LLTRHK  VA F
Sbjct:   19 ESKQDRVVEDISKAIMSIKEAIFGEDEQSSSKEHAQGIASEACRVGLVSDLVTYLTVLDFETRKDVVQIFCAIIRITLEDGGRPGRDYVLAHPDVLSTLFYGYEDPEIALNCGQMFRECIRHEDIAKFVLECNLFEELFEKLNVQSFEVASDAFATFKDLLTRHKQLVAAF 189          
BLAST of FC928862 vs. ExPASy Swiss-Prot
Match: HYMA_EMENI (Conidiophore development protein hymA OS=Emericella nidulans GN=hymA PE=3 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 4.162e-15
Identity = 61/226 (26.99%), Postives = 103/226 (45.58%), Query Frame = 2
Query:  209 KSKPRTPVDIVRQTRDLIIYANRSADVRESKREDKMAELCKNIRELKSILYGNSESEPVSEACAQLTAEFFRENTLRLLITCLPKLNLEARKDATQVVANLQR-QQVHSKL----IASDYLEANIDLLDILIAGYENTDMALHYGAMLRECIRHQSVARYVLESQHMK-----------------------KFFDYIQLPNFDIAADAAATFKELLTRHKSTVAEF 802
            + + R P D+VR  +DL++     +    SK ED   EL K + ++K ++ G  E E  ++    L      E+ L  L   L  L  EARKD   + +++ R +  H       + S  +    +++  L  GYE++  A+  G +LRE ++   +A  +L  Q  +                       +FF +I    F+++ADA  TF+E+LTRHKS V  +
Sbjct:    7 RGRSRQPSDVVRSIKDLLLRLREPSTA--SKVED---ELAKQLSQMKLMVQGTQELEASTDQVHALVQAMLHEDLLYELAVALHNLPFEARKDTQTIFSHILRFKPPHGNSPDPPVISYIVHNRPEIIIELCRGYEHSQSAMPCGTILREALKFDVIAAIILYDQSKEGEPAIRLTEVQPNVPQRGTGVFWRFFHWIDRGTFELSADAFTTFREILTRHKSLVTGY 227          
BLAST of FC928862 vs. ExPASy Swiss-Prot
Match: HYM1_YEAST (Protein HYM1 OS=Saccharomyces cerevisiae GN=HYM1 PE=1 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 9.596e-12
Identity = 48/206 (23.30%), Postives = 95/206 (46.12%), Query Frame = 2
Query:  206 FKSKPRTPVDIVRQTRDLIIYANRSADVRESKREDKMAELC-KNIRELKSILYGNSESEPVSEACAQLTAEFFRENTLRLLITCLPKLNLEARKDATQVVANLQRQQVHSKLIASDYLEANIDLLDILIAGYENT-------DMALHYGAMLRECIRHQSVARYVLESQHMKKFFDYIQLPNFDIAADAAATFKELLTRHKSTVAE 799
            +K  P+TP D  R   + +   +  +  +++KR  K+ E C K +   K  + G+++  P  EA  +L     R +    L+     L  EAR++   + +        +K +  DYL +    + +++   E         D+ L  G M+ ECI+++ + R +L+   + KFF++ +L NF+I+ ++        T H   V++
Sbjct:   16 WKKNPKTPSDYARLIIEQLNKFSSPSLTQDNKR--KVQEECTKYLIGTKHFIVGDTDPHPTPEAIDELYTAMHRADVFYELLLHFVDLEFEARRECMLIFSICLGYSKDNKFVTVDYLVSQPKTISLMLRTAEVALQQKGCQDIFLTVGNMIIECIKYEQLCRIILKDPQLWKFFEFAKLGNFEISTESLQILSAAFTAHPKLVSK 219          
The following BLAST results are available for this feature:
BLAST of FC928862 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 14
Match NameE-valueIdentityDescription
PMO25_SCHPO2.353e-2633.50Mo25-like protein OS=Schizosaccharomyces pombe GN=... [more]
DEE76_CHLPR3.397e-2536.26Degreening-related gene dee76 protein OS=Chlorella... [more]
HYMA_EMENI4.162e-1526.99Conidiophore development protein hymA OS=Emericell... [more]
HYM1_YEAST9.596e-1223.30Protein HYM1 OS=Saccharomyces cerevisiae GN=HYM1 P... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAH1CB05RM2 PhII-IIIV1 Citrus clementina cDNA clone KN0AAH1CB05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC928862 ID=FC928862; Name=FC928862; organism=Citrus clementina; type=EST; length=804bp
ACAACTCAGACAGCAAAATTAAATTCGAAAGCTGAAACCCTAAAGCCTAA
TTAGAAGAAGAAGATACACAATAGGAATCTGTGCGTCAAAGCCGAAAGCT
GAGGCGCTCTCAGCCTCGGCGAGTCAATCGGTCCAGCGCCTCTCGAGCTC
AGCCAGTTCAAGTTCGATTAACGAATTAGACCCTAACACAAAAATGAAGG
GACTTTTCAAATCCAAGCCTCGTACTCCCGTCGACATCGTCCGCCAAACT
CGGGATCTTATTATTTACGCCAATCGCAGCGCAGATGTTCGTGAATCGAA
GCGCGAAGACAAGATGGCAGAGTTATGTAAAAACATCAGGGAGTTAAAGT
CAATACTTTATGGCAATAGTGAATCTGAGCCAGTTTCAGAGGCATGTGCA
CAATTGACTGCAGAGTTCTTCAGGGAAAACACGTTACGGCTTTTGATAAC
TTGTCTTCCAAAGTTGAACTTGGAGGCAAGGAAAGATGCCACTCAGGTTG
TTGCTAATTTACAGAGGCAACAAGTTCACTCAAAGTTGATTGCCTCTGAC
TACTTAGAAGCAAACATAGATCTTTTGGATATTCTGATAGCTGGTTATGA
AAACACAGACATGGCTTTACATTATGGTGCTATGCTTAGGGAGTGTATTC
GTCATCAGAGTGTTGCAAGATATGTGTTGGAATCCCAGCACATGAAGAAG
TTTTTTGACTATATACAGCTTCCAAATTTTGACATTGCTGCAGATGCTGC
TGCAACTTTTAAGGAACTGTTGACAAGGCACAAATCCACTGTGGCCGAAT
TTCT
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