FC928864
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC928864 vs. ExPASy Swiss-Prot
Match: RL32_YEAST (60S ribosomal protein L32 OS=Saccharomyces cerevisiae GN=RPL32 PE=1 SV=1) HSP 1 Score: 114.005 bits (284), Expect = 6.387e-25 Identity = 58/108 (53.70%), Postives = 70/108 (64.81%), Query Frame = -1 Query: 241 RPQSDRKISVKENWRRPKGIDSRVRRKFNGCVLMPNIGYGWDKKTRHYLPNGFKKFVVHNVNELELLMMHNRTYCVEIAHNVSTKKRKEIVERAAQLDVVVTNKLARL 564 R SDR V ENWR+ KGIDS VRR+F G + P IGYG +KKT+ P+G K F+V NV +LE L MH +TY EIAHN+S K R I+ RA L + VTN RL Sbjct: 19 RHHSDRYHRVAENWRKQKGIDSVVRRRFRGNISQPKIGYGSNKKTKFLSPSGHKTFLVANVKDLETLTMHTKTYAAEIAHNISAKNRVVILARAKALGIKVTNPKGRL 126
BLAST of FC928864 vs. ExPASy Swiss-Prot
Match: RL32_CANAL (60S ribosomal protein L32 OS=Candida albicans GN=RPL32 PE=3 SV=1) HSP 1 Score: 112.464 bits (280), Expect = 1.858e-24 Identity = 55/108 (50.93%), Postives = 76/108 (70.37%), Query Frame = -1 Query: 241 RPQSDRKISVKENWRRPKGIDSRVRRKFNGCVLMPNIGYGWDKKTRHYLPNGFKKFVVHNVNELELLMMHNRTYCVEIAHNVSTKKRKEIVERAAQLDVVVTNKLARL 564 R SDR V ENWR+ KGIDS VRR+F G + PNIGYG +KKT+ P G+K ++V NV +L++L++H ++Y EIA +VS++KR EIV +A +L V VTN +L Sbjct: 20 RHHSDRYHRVAENWRKQKGIDSCVRRRFRGTIPQPNIGYGSNKKTKFLNPAGYKVYLVKNVKDLDVLLLHTKSYAAEIASSVSSRKRVEIVAKAKKLGVKVTNPKGKL 127
BLAST of FC928864 vs. ExPASy Swiss-Prot
Match: RL32_CANGA (60S ribosomal protein L32 OS=Candida glabrata GN=RPL32 PE=3 SV=1) HSP 1 Score: 108.997 bits (271), Expect = 2.055e-23 Identity = 56/108 (51.85%), Postives = 70/108 (64.81%), Query Frame = -1 Query: 241 RPQSDRKISVKENWRRPKGIDSRVRRKFNGCVLMPNIGYGWDKKTRHYLPNGFKKFVVHNVNELELLMMHNRTYCVEIAHNVSTKKRKEIVERAAQLDVVVTNKLARL 564 R SDR V ENWR+ KGIDS VRR+F G + P IGYG +KKT+ P+G K +V N+ +LE L MH ++Y EIAHNVS+K R ++ RA L V VTN RL Sbjct: 20 RHHSDRYHRVSENWRKQKGIDSVVRRRFRGNISEPTIGYGSNKKTKFMSPSGHKVVLVSNLKDLETLTMHTKSYAAEIAHNVSSKNRVTLLARAKALGVKVTNAKGRL 127
BLAST of FC928864 vs. ExPASy Swiss-Prot
Match: RL32_ENCCU (60S ribosomal protein L32 OS=Encephalitozoon cuniculi GN=RPL32 PE=3 SV=1) HSP 1 Score: 100.523 bits (249), Expect = 7.308e-21 Identity = 55/114 (48.25%), Postives = 70/114 (61.40%), Query Frame = -1 Query: 223 RPQSDRKISVKENWRRPKGIDSRVRRKFNGCVLMPNIGYGWDKKTRHYLPNGFKKFVVHNVNELELLMMHNRTYCVEIAHNVSTKKRKEIVERAAQLDVVVTNKLARLRSQEEE 564 R SDR VK +WRRP GIDS+VR++ G MP+I Y K+ RH LPNG +K + N+N+L L NR YC EIAH V +KR IV RA +L + + N ARL + EE Sbjct: 26 RHHSDRYKRVKPSWRRPHGIDSKVRKRCKGEREMPSIKYKKPKEIRHLLPNGLRKVRIFNINDLTPLTSLNRFYCGEIAHAVGARKRIAIVNRAKELGICLLNGNARLIPEIEE 139
BLAST of FC928864 vs. ExPASy Swiss-Prot
Match: RL32_PYRFU (50S ribosomal protein L32e OS=Pyrococcus furiosus GN=rpl32e PE=3 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 6.625e-14 Identity = 41/90 (45.56%), Postives = 55/90 (61.11%), Query Frame = -1 Query: 256 WRRPKGIDSRVRRKFNGCVLMPNIGYGWDKKTRHYLPNGFKKFVVHNVNELELLMMHNRTYCVEIAHNVSTKKRKEIVERAAQLDVVVTN 525 WRRPKGIDS++R K G P+IG+ K R P+G+++ +VHNV ELE L + IAH V KKR EI++RA +L + V N Sbjct: 40 WRRPKGIDSKMRLKLKGKPRSPSIGWSSPKLVRGLHPSGYEEVLVHNVKELEAL--DPKRQAARIAHTVGKKKRIEIIKRAEELGIKVLN 127
BLAST of FC928864 vs. ExPASy Swiss-Prot
Match: RL32_PYRHO (50S ribosomal protein L32e OS=Pyrococcus horikoshii GN=rpl32e PE=3 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 1.928e-13 Identity = 40/90 (44.44%), Postives = 55/90 (61.11%), Query Frame = -1 Query: 256 WRRPKGIDSRVRRKFNGCVLMPNIGYGWDKKTRHYLPNGFKKFVVHNVNELELLMMHNRTYCVEIAHNVSTKKRKEIVERAAQLDVVVTN 525 WRRPKGIDS++R K G P+IG+ + R P+G+++ ++HNV ELE L R IAH V KKR EI++RA +L + V N Sbjct: 40 WRRPKGIDSKMRLKLKGKPRSPSIGWSSPRLVRGLHPSGYEEVLIHNVKELERL--DPRRQAARIAHTVGKKKRIEILKRAEELGIKVLN 127
BLAST of FC928864 vs. ExPASy Swiss-Prot
Match: RL32_TRIHA (60S ribosomal protein L32 OS=Trichoderma harzianum GN=rpl32 PE=2 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 2.518e-13 Identity = 43/91 (47.25%), Postives = 52/91 (57.14%), Query Frame = -1 Query: 304 RPQSDRKISVKENWRRPKGIDSRVRRKFNGCVLMPNIGYGWDKKTRHYLPNGFKKFVVHNVNELELL----MMHNRTYCVEIAHNVSTKKR 564 R QSDR V +WR+PKGID RVRR+F G + MP IGYG +KKTR P+G F +HN L M EIA VS++KR Sbjct: 20 RHQSDRFDRVGSSWRKPKGIDGRVRRRFRGTIRMPKIGYGSNKKTRFLTPSGHNAF-LHNARTLSCAAGCSMQSTDPSAAEIATPVSSRKR 109
BLAST of FC928864 vs. ExPASy Swiss-Prot
Match: RL32_METKA (50S ribosomal protein L32e OS=Methanopyrus kandleri GN=rpl32 PE=3 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 3.288e-13 Identity = 41/103 (39.81%), Postives = 60/103 (58.25%), Query Frame = -1 Query: 256 RPQSDRKISVKENWRRPKGIDSRVRRKFNGCVLMPNIGYGWDKKTRHYLPNGFKKFVVHNVNELELLMMHNRTYCVEIAHNVSTKKRKEIVERAAQLDVVVTN 564 R + R + E WRRPKG S++RRK MPN GYG KK R P+G+++ +V+N +LE + + IA V +KR+EI+E+A +L +VV N Sbjct: 30 RQEWHRYKKLGEKWRRPKGRHSKMRRKLKSKPKMPNPGYGSPKKVRGLHPSGYEEVLVYNPKDLE--KIDPKRQAARIASRVGRRKRQEILEKAEELGIVVLN 130
BLAST of FC928864 vs. ExPASy Swiss-Prot
Match: RL32_PYRAB (50S ribosomal protein L32e OS=Pyrococcus abyssi GN=rpl32e PE=3 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 4.294e-13 Identity = 39/90 (43.33%), Postives = 55/90 (61.11%), Query Frame = -1 Query: 256 WRRPKGIDSRVRRKFNGCVLMPNIGYGWDKKTRHYLPNGFKKFVVHNVNELELLMMHNRTYCVEIAHNVSTKKRKEIVERAAQLDVVVTN 525 WRRPKGIDS++R K G P+IG+ + R P+G+++ ++HNV ELE L + IAH V KKR EI++RA +L + V N Sbjct: 40 WRRPKGIDSKMRLKLKGKPRSPSIGWSSPRLVRGLHPSGYEEVLIHNVKELEKL--DPKRQAARIAHTVGKKKRIEILKRAQELGIKVLN 127
BLAST of FC928864 vs. ExPASy Swiss-Prot
Match: RL32_SULSO (50S ribosomal protein L32e OS=Sulfolobus solfataricus GN=rpl32e PE=3 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 9.567e-13 Identity = 39/106 (36.79%), Postives = 62/106 (58.49%), Query Frame = -1 Query: 253 RPQSDR--KISVKENWRRPKGIDSRVRRKFNGCVLMPNIGYGWDKKTRHYLPNGFKKFVVHNVNELELLMMHNRTYCVEIAHNVSTKKRKEIVERAAQLDVVVTNK 564 R SD+ ++ +E WRRP G D++ R K G + ++GY KK R + P+G ++ +VHNVNEL + V I+ +V KKR EI+ +A +L + V+N+ Sbjct: 29 RYDSDKFYRLGRQEKWRRPYGRDNKTRLKVRGFPAIVSVGYRLPKKVRGFHPSGLRQVIVHNVNELVKVQNQKDNVIVTISSSVGFKKRLEILNKARELGLKVSNE 134 The following BLAST results are available for this feature:
BLAST of FC928864 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 51
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Sequences
The
following sequences are available for this feature:
EST sequence >FC928864 ID=FC928864; Name=FC928864; organism=Citrus clementina; type=EST; length=627bpback to top |