FC928864
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC928864 vs. ExPASy Swiss-Prot
Match: RL32_SULIY (50S ribosomal protein L32e OS=Sulfolobus islandicus (strain Y.G.57.14 / Yellowstone #1) GN=rpl32e PE=3 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 2.131e-12 Identity = 38/106 (35.85%), Postives = 63/106 (59.43%), Query Frame = -1 Query: 253 RPQSDR--KISVKENWRRPKGIDSRVRRKFNGCVLMPNIGYGWDKKTRHYLPNGFKKFVVHNVNELELLMMHNRTYCVEIAHNVSTKKRKEIVERAAQLDVVVTNK 564 R SD+ ++ +E WRRP G D++ R K G + ++GY K+ R + P+G ++ +VHNVN+L + + V IA +V KKR EI+ +A +L + V+N+ Sbjct: 29 RYDSDKFFRLGRQEKWRRPYGRDNKTRLKVRGFPAIVSVGYRLPKEVRGFHPSGLRQVIVHNVNDLVKVQNQKDSVIVTIASSVGFKKRLEILNKARELGLKVSNE 134
BLAST of FC928864 vs. ExPASy Swiss-Prot
Match: RL32_SULIN (50S ribosomal protein L32e OS=Sulfolobus islandicus (strain Y.N.15.51 / Yellowstone #2) GN=rpl32e PE=3 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 2.131e-12 Identity = 38/106 (35.85%), Postives = 63/106 (59.43%), Query Frame = -1 Query: 253 RPQSDR--KISVKENWRRPKGIDSRVRRKFNGCVLMPNIGYGWDKKTRHYLPNGFKKFVVHNVNELELLMMHNRTYCVEIAHNVSTKKRKEIVERAAQLDVVVTNK 564 R SD+ ++ +E WRRP G D++ R K G + ++GY K+ R + P+G ++ +VHNVN+L + + V IA +V KKR EI+ +A +L + V+N+ Sbjct: 29 RYDSDKFFRLGRQEKWRRPYGRDNKTRLKVRGFPAIVSVGYRLPKEVRGFHPSGLRQVIVHNVNDLVKVQNQKDSVIVTIASSVGFKKRLEILNKARELGLKVSNE 134
BLAST of FC928864 vs. ExPASy Swiss-Prot
Match: RL32_SULIM (50S ribosomal protein L32e OS=Sulfolobus islandicus (strain M.14.25 / Kamchatka #1) GN=rpl32e PE=3 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 2.131e-12 Identity = 38/106 (35.85%), Postives = 63/106 (59.43%), Query Frame = -1 Query: 253 RPQSDR--KISVKENWRRPKGIDSRVRRKFNGCVLMPNIGYGWDKKTRHYLPNGFKKFVVHNVNELELLMMHNRTYCVEIAHNVSTKKRKEIVERAAQLDVVVTNK 564 R SD+ ++ +E WRRP G D++ R K G + ++GY K+ R + P+G ++ +VHNVN+L + + V IA +V KKR EI+ +A +L + V+N+ Sbjct: 29 RYDSDKFFRLGRQEKWRRPYGRDNKTRLKVRGFPAIVSVGYRLPKEVRGFHPSGLRQVIVHNVNDLVKVQNQKDSVIVTIASSVGFKKRLEILNKARELGLKVSNE 134
BLAST of FC928864 vs. ExPASy Swiss-Prot
Match: RL32_SULIL (50S ribosomal protein L32e OS=Sulfolobus islandicus (strain L.S.2.15 / Lassen #1) GN=rpl32e PE=3 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 2.131e-12 Identity = 38/106 (35.85%), Postives = 63/106 (59.43%), Query Frame = -1 Query: 253 RPQSDR--KISVKENWRRPKGIDSRVRRKFNGCVLMPNIGYGWDKKTRHYLPNGFKKFVVHNVNELELLMMHNRTYCVEIAHNVSTKKRKEIVERAAQLDVVVTNK 564 R SD+ ++ +E WRRP G D++ R K G + ++GY K+ R + P+G ++ +VHNVN+L + + V IA +V KKR EI+ +A +L + V+N+ Sbjct: 29 RYDSDKFFRLGRQEKWRRPYGRDNKTRLKVRGFPAIVSVGYRLPKEVRGFHPSGLRQVIVHNVNDLVKVQNQKDSVIVTIASSVGFKKRLEILNKARELGLKVSNE 134
BLAST of FC928864 vs. ExPASy Swiss-Prot
Match: RL32_SULIK (50S ribosomal protein L32e OS=Sulfolobus islandicus (strain M.16.4 / Kamchatka #3) GN=rpl32e PE=3 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 2.131e-12 Identity = 38/106 (35.85%), Postives = 63/106 (59.43%), Query Frame = -1 Query: 253 RPQSDR--KISVKENWRRPKGIDSRVRRKFNGCVLMPNIGYGWDKKTRHYLPNGFKKFVVHNVNELELLMMHNRTYCVEIAHNVSTKKRKEIVERAAQLDVVVTNK 564 R SD+ ++ +E WRRP G D++ R K G + ++GY K+ R + P+G ++ +VHNVN+L + + V IA +V KKR EI+ +A +L + V+N+ Sbjct: 29 RYDSDKFFRLGRQEKWRRPYGRDNKTRLKVRGFPAIVSVGYRLPKEVRGFHPSGLRQVIVHNVNDLVKVQNQKDSVIVTIASSVGFKKRLEILNKARELGLKVSNE 134
BLAST of FC928864 vs. ExPASy Swiss-Prot
Match: RL32_SULIA (50S ribosomal protein L32e OS=Sulfolobus islandicus (strain M.16.27) GN=rpl32e PE=3 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 2.131e-12 Identity = 38/106 (35.85%), Postives = 63/106 (59.43%), Query Frame = -1 Query: 253 RPQSDR--KISVKENWRRPKGIDSRVRRKFNGCVLMPNIGYGWDKKTRHYLPNGFKKFVVHNVNELELLMMHNRTYCVEIAHNVSTKKRKEIVERAAQLDVVVTNK 564 R SD+ ++ +E WRRP G D++ R K G + ++GY K+ R + P+G ++ +VHNVN+L + + V IA +V KKR EI+ +A +L + V+N+ Sbjct: 29 RYDSDKFFRLGRQEKWRRPYGRDNKTRLKVRGFPAIVSVGYRLPKEVRGFHPSGLRQVIVHNVNDLVKVQNQKDSVIVTIASSVGFKKRLEILNKARELGLKVSNE 134
BLAST of FC928864 vs. ExPASy Swiss-Prot
Match: RL32_MAIZE (60S ribosomal protein L32 (Fragment) OS=Zea mays GN=RPL32 PE=3 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 4.748e-12 Identity = 35/42 (83.33%), Postives = 37/42 (88.10%), Query Frame = -1 Query: 223 TYCVEIAHNVSTKKRKEIVERAAQLDVVVTNKLARLRSQEEE 348 TYC EIAHNVSTKKRKEIVERAAQLD+VV KLAR SQE+E Sbjct: 1 TYCAEIAHNVSTKKRKEIVERAAQLDIVVPTKLARAPSQEDE 42
BLAST of FC928864 vs. ExPASy Swiss-Prot
Match: RL32_THESM (50S ribosomal protein L32e OS=Thermococcus sibiricus (strain MM 739 / DSM 12597) GN=rpl32e PE=3 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 2.356e-11 Identity = 36/90 (40.00%), Postives = 54/90 (60.00%), Query Frame = -1 Query: 256 WRRPKGIDSRVRRKFNGCVLMPNIGYGWDKKTRHYLPNGFKKFVVHNVNELELLMMHNRTYCVEIAHNVSTKKRKEIVERAAQLDVVVTN 525 WR+PKG DS++R K G P+IG+ K R P+G+++ +V+NV +LEL+ ++ IA V KKR I+ERA +L + V N Sbjct: 38 WRKPKGTDSKMRVKLKGKARSPSIGWSSPKAVRGLHPSGYEEVLVYNVKDLELI--DSKRQAARIAATVGKKKRIMIIERARELGIKVLN 125
BLAST of FC928864 vs. ExPASy Swiss-Prot
Match: RL32_THEGJ (50S ribosomal protein L32e OS=Thermococcus gammatolerans (strain DSM 15229 / JCM 11827 / EJ3) GN=rpl32e PE=3 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 4.019e-11 Identity = 36/90 (40.00%), Postives = 52/90 (57.78%), Query Frame = -1 Query: 256 WRRPKGIDSRVRRKFNGCVLMPNIGYGWDKKTRHYLPNGFKKFVVHNVNELELLMMHNRTYCVEIAHNVSTKKRKEIVERAAQLDVVVTN 525 WRRPKGIDS++R K G P+IG+ + R P+G+++ +VHNV ELE + IA V +KR+ I+ RA +L + V N Sbjct: 38 WRRPKGIDSKMRLKKKGKPRSPSIGWSSPRAVRGLHPSGYEEVLVHNVKELEAI--DPTRQAARIARTVGARKREAIIARAKELGIKVLN 125
BLAST of FC928864 vs. ExPASy Swiss-Prot
Match: RL32_THEON (50S ribosomal protein L32e OS=Thermococcus onnurineus (strain NA1) GN=rpl32e PE=3 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 5.250e-11 Identity = 37/90 (41.11%), Postives = 52/90 (57.78%), Query Frame = -1 Query: 256 WRRPKGIDSRVRRKFNGCVLMPNIGYGWDKKTRHYLPNGFKKFVVHNVNELELLMMHNRTYCVEIAHNVSTKKRKEIVERAAQLDVVVTN 525 WRRPKGIDS++R K G P+IG+ + R P+G+++ +VHNV ELE + IA V +KR+ I+ RA +L V V N Sbjct: 38 WRRPKGIDSKMRLKKKGKARSPSIGWSSPRLVRGLHPSGYEEVLVHNVKELEAI--DPARQAARIARTVGARKREMILARAKELGVKVLN 125 The following BLAST results are available for this feature:
BLAST of FC928864 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 51
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Sequences
The
following sequences are available for this feature:
EST sequence >FC928864 ID=FC928864; Name=FC928864; organism=Citrus clementina; type=EST; length=627bpback to top |