FC928883
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC928883 vs. ExPASy Swiss-Prot
Match: RL32_THEGJ (50S ribosomal protein L32e OS=Thermococcus gammatolerans (strain DSM 15229 / JCM 11827 / EJ3) GN=rpl32e PE=3 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 6.794e-13 Identity = 39/90 (43.33%), Postives = 55/90 (61.11%), Query Frame = -2 Query: 281 WRRPKGIDSRVRRKFKGCVLMPNIGYGSDKKTRHYLPNGFKKFVVHNVNELELLMMHNRTYCAEIAHNVSTKKRKEIVERAAQLDVVVTN 550 WRRPKGIDS++R K KG P+IG+ S + R P+G+++ +VHNV ELE + A IA V +KR+ I+ RA +L + V N Sbjct: 38 WRRPKGIDSKMRLKKKGKPRSPSIGWSSPRAVRGLHPSGYEEVLVHNVKELEAI--DPTRQAARIARTVGARKREAIIARAKELGIKVLN 125
BLAST of FC928883 vs. ExPASy Swiss-Prot
Match: RL32_THEON (50S ribosomal protein L32e OS=Thermococcus onnurineus (strain NA1) GN=rpl32e PE=3 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 8.874e-13 Identity = 40/90 (44.44%), Postives = 55/90 (61.11%), Query Frame = -2 Query: 281 WRRPKGIDSRVRRKFKGCVLMPNIGYGSDKKTRHYLPNGFKKFVVHNVNELELLMMHNRTYCAEIAHNVSTKKRKEIVERAAQLDVVVTN 550 WRRPKGIDS++R K KG P+IG+ S + R P+G+++ +VHNV ELE + A IA V +KR+ I+ RA +L V V N Sbjct: 38 WRRPKGIDSKMRLKKKGKARSPSIGWSSPRLVRGLHPSGYEEVLVHNVKELEAI--DPARQAARIARTVGARKREMILARAKELGVKVLN 125
BLAST of FC928883 vs. ExPASy Swiss-Prot
Match: RL32_PYRKO (50S ribosomal protein L32e OS=Pyrococcus kodakaraensis GN=rpl32e PE=3 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 8.874e-13 Identity = 41/90 (45.56%), Postives = 55/90 (61.11%), Query Frame = -2 Query: 281 WRRPKGIDSRVRRKFKGCVLMPNIGYGSDKKTRHYLPNGFKKFVVHNVNELELLMMHNRTYCAEIAHNVSTKKRKEIVERAAQLDVVVTN 550 WRRPKGIDS++R K KG P+IG+ S K R P+G+++ +VHNV ELE + A IA V +KR+ I+ RA +L V V N Sbjct: 38 WRRPKGIDSKMRLKKKGKPRSPSIGWSSPKAVRGLHPSGYEEVLVHNVKELEAI--DPTRQAARIAGTVGARKREMILARAKELGVKVLN 125
BLAST of FC928883 vs. ExPASy Swiss-Prot
Match: RL32_SULSO (50S ribosomal protein L32e OS=Sulfolobus solfataricus GN=rpl32e PE=3 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 1.977e-12 Identity = 38/106 (35.85%), Postives = 62/106 (58.49%), Query Frame = -2 Query: 278 RPQSDR--KISVKENWRRPKGIDSRVRRKFKGCVLMPNIGYGSDKKTRHYLPNGFKKFVVHNVNELELLMMHNRTYCAEIAHNVSTKKRKEIVERAAQLDVVVTNK 589 R SD+ ++ +E WRRP G D++ R K +G + ++GY KK R + P+G ++ +VHNVNEL + I+ +V KKR EI+ +A +L + V+N+ Sbjct: 29 RYDSDKFYRLGRQEKWRRPYGRDNKTRLKVRGFPAIVSVGYRLPKKVRGFHPSGLRQVIVHNVNELVKVQNQKDNVIVTISSSVGFKKRLEILNKARELGLKVSNE 134
BLAST of FC928883 vs. ExPASy Swiss-Prot
Match: RL32_MAIZE (60S ribosomal protein L32 (Fragment) OS=Zea mays GN=RPL32 PE=3 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 1.977e-12 Identity = 36/42 (85.71%), Postives = 38/42 (90.48%), Query Frame = -2 Query: 248 TYCAEIAHNVSTKKRKEIVERAAQLDVVVTNKLARLRSQEEE 373 TYCAEIAHNVSTKKRKEIVERAAQLD+VV KLAR SQE+E Sbjct: 1 TYCAEIAHNVSTKKRKEIVERAAQLDIVVPTKLARAPSQEDE 42
BLAST of FC928883 vs. ExPASy Swiss-Prot
Match: RL32_SULIY (50S ribosomal protein L32e OS=Sulfolobus islandicus (strain Y.G.57.14 / Yellowstone #1) GN=rpl32e PE=3 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 4.404e-12 Identity = 37/106 (34.91%), Postives = 63/106 (59.43%), Query Frame = -2 Query: 278 RPQSDR--KISVKENWRRPKGIDSRVRRKFKGCVLMPNIGYGSDKKTRHYLPNGFKKFVVHNVNELELLMMHNRTYCAEIAHNVSTKKRKEIVERAAQLDVVVTNK 589 R SD+ ++ +E WRRP G D++ R K +G + ++GY K+ R + P+G ++ +VHNVN+L + + IA +V KKR EI+ +A +L + V+N+ Sbjct: 29 RYDSDKFFRLGRQEKWRRPYGRDNKTRLKVRGFPAIVSVGYRLPKEVRGFHPSGLRQVIVHNVNDLVKVQNQKDSVIVTIASSVGFKKRLEILNKARELGLKVSNE 134
BLAST of FC928883 vs. ExPASy Swiss-Prot
Match: RL32_SULIN (50S ribosomal protein L32e OS=Sulfolobus islandicus (strain Y.N.15.51 / Yellowstone #2) GN=rpl32e PE=3 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 4.404e-12 Identity = 37/106 (34.91%), Postives = 63/106 (59.43%), Query Frame = -2 Query: 278 RPQSDR--KISVKENWRRPKGIDSRVRRKFKGCVLMPNIGYGSDKKTRHYLPNGFKKFVVHNVNELELLMMHNRTYCAEIAHNVSTKKRKEIVERAAQLDVVVTNK 589 R SD+ ++ +E WRRP G D++ R K +G + ++GY K+ R + P+G ++ +VHNVN+L + + IA +V KKR EI+ +A +L + V+N+ Sbjct: 29 RYDSDKFFRLGRQEKWRRPYGRDNKTRLKVRGFPAIVSVGYRLPKEVRGFHPSGLRQVIVHNVNDLVKVQNQKDSVIVTIASSVGFKKRLEILNKARELGLKVSNE 134
BLAST of FC928883 vs. ExPASy Swiss-Prot
Match: RL32_SULIM (50S ribosomal protein L32e OS=Sulfolobus islandicus (strain M.14.25 / Kamchatka #1) GN=rpl32e PE=3 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 4.404e-12 Identity = 37/106 (34.91%), Postives = 63/106 (59.43%), Query Frame = -2 Query: 278 RPQSDR--KISVKENWRRPKGIDSRVRRKFKGCVLMPNIGYGSDKKTRHYLPNGFKKFVVHNVNELELLMMHNRTYCAEIAHNVSTKKRKEIVERAAQLDVVVTNK 589 R SD+ ++ +E WRRP G D++ R K +G + ++GY K+ R + P+G ++ +VHNVN+L + + IA +V KKR EI+ +A +L + V+N+ Sbjct: 29 RYDSDKFFRLGRQEKWRRPYGRDNKTRLKVRGFPAIVSVGYRLPKEVRGFHPSGLRQVIVHNVNDLVKVQNQKDSVIVTIASSVGFKKRLEILNKARELGLKVSNE 134
BLAST of FC928883 vs. ExPASy Swiss-Prot
Match: RL32_SULIL (50S ribosomal protein L32e OS=Sulfolobus islandicus (strain L.S.2.15 / Lassen #1) GN=rpl32e PE=3 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 4.404e-12 Identity = 37/106 (34.91%), Postives = 63/106 (59.43%), Query Frame = -2 Query: 278 RPQSDR--KISVKENWRRPKGIDSRVRRKFKGCVLMPNIGYGSDKKTRHYLPNGFKKFVVHNVNELELLMMHNRTYCAEIAHNVSTKKRKEIVERAAQLDVVVTNK 589 R SD+ ++ +E WRRP G D++ R K +G + ++GY K+ R + P+G ++ +VHNVN+L + + IA +V KKR EI+ +A +L + V+N+ Sbjct: 29 RYDSDKFFRLGRQEKWRRPYGRDNKTRLKVRGFPAIVSVGYRLPKEVRGFHPSGLRQVIVHNVNDLVKVQNQKDSVIVTIASSVGFKKRLEILNKARELGLKVSNE 134
BLAST of FC928883 vs. ExPASy Swiss-Prot
Match: RL32_SULIK (50S ribosomal protein L32e OS=Sulfolobus islandicus (strain M.16.4 / Kamchatka #3) GN=rpl32e PE=3 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 4.404e-12 Identity = 37/106 (34.91%), Postives = 63/106 (59.43%), Query Frame = -2 Query: 278 RPQSDR--KISVKENWRRPKGIDSRVRRKFKGCVLMPNIGYGSDKKTRHYLPNGFKKFVVHNVNELELLMMHNRTYCAEIAHNVSTKKRKEIVERAAQLDVVVTNK 589 R SD+ ++ +E WRRP G D++ R K +G + ++GY K+ R + P+G ++ +VHNVN+L + + IA +V KKR EI+ +A +L + V+N+ Sbjct: 29 RYDSDKFFRLGRQEKWRRPYGRDNKTRLKVRGFPAIVSVGYRLPKEVRGFHPSGLRQVIVHNVNDLVKVQNQKDSVIVTIASSVGFKKRLEILNKARELGLKVSNE 134 The following BLAST results are available for this feature:
BLAST of FC928883 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 51
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Sequences
The
following sequences are available for this feature:
EST sequence >FC928883 ID=FC928883; Name=FC928883; organism=Citrus clementina; type=EST; length=695bpback to top |