FC928897
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC928897 vs. ExPASy Swiss-Prot
Match: ACCO1_BRAJU (1-aminocyclopropane-1-carboxylate oxidase OS=Brassica juncea GN=ACO PE=2 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 2.611e-13 Identity = 34/93 (36.56%), Postives = 57/93 (61.29%), Query Frame = 1 Query: 13 NEVPGLQVFKDDRWIDAKYIPNALIIHIGDQIEILSNGKYKAVLHRTTVNKDKTRMSWPVFLEPPADTVVGPLPQLVDDENPPKYKAKKFKDY 291 ++V GLQ+ KD WID + ++++I++GDQ+E+++NG+YK+++HR K+ RMS F P +D + P L E +Y + F DY Sbjct: 193 DKVTGLQLLKDGDWIDVPPLNHSIVINLGDQLEVITNGRYKSMMHRVVTQKEGNRMSIASFYNPGSDAEISPASSLACKET--EYPSFVFDDY 283
BLAST of FC928897 vs. ExPASy Swiss-Prot
Match: GAOX1_ORYSJ (Gibberellin 20 oxidase 1 OS=Oryza sativa subsp. japonica GN=20ox1 PE=2 SV=2) HSP 1 Score: 73.559 bits (179), Expect = 5.816e-13 Identity = 37/89 (41.57%), Postives = 52/89 (58.43%), Query Frame = 1 Query: 1 VLVPNEVPGLQVFKDDRWIDAKYIPNALIIHIGDQIEILSNGKYKAVLHRTTVNKDKTRMSWPVFLEPPADTVVGPLPQLVDDENPPKY 267 +L + V GL+V+ + RW + P AL++++GD LSN +Y++ LHR VN R S FL P DTVV P +LVDD +P Y Sbjct: 242 ILHQDHVGGLEVWAEGRWRAIRPRPGALVVNVGDTFMALSNARYRSCLHRAVVNSTAPRRSLAFFLCPEMDTVVRPPEELVDDHHPRVY 330
BLAST of FC928897 vs. ExPASy Swiss-Prot
Match: GAOX3_ARATH (Gibberellin 20 oxidase 3 OS=Arabidopsis thaliana GN=20ox3 PE=2 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 7.596e-13 Identity = 39/115 (33.91%), Postives = 65/115 (56.52%), Query Frame = 1 Query: 1 VLVPNEVPGLQVFKDDRWIDAKYIPNALIIHIGDQIEILSNGKYKAVLHRTTVNKDKTRMSWPVFLEPPADTVVGPLPQLVDDENPPKYKAKKFKDYSYCKLNKLPQ*IFHYEKN 345 +L ++V GLQVF D++W P+A +++IGD L+NG+YK+ LHR VN ++ R ++ FL P + VV P +LV N K +K+ D+++ + Q + + N Sbjct: 254 ILHQDQVGGLQVFVDNKWQSIPPNPHAFVVNIGDTFMALTNGRYKSCLHRAVVNSERERKTFAFFLCPKGEKVVKPPEELV---NGVKSGERKYPDFTWSMFLEFTQKHYRADMN 365
BLAST of FC928897 vs. ExPASy Swiss-Prot
Match: GAOX2_ARATH (Gibberellin 20 oxidase 2 OS=Arabidopsis thaliana GN=20ox2 PE=2 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 1.692e-12 Identity = 37/99 (37.37%), Postives = 57/99 (57.58%), Query Frame = 1 Query: 1 VLVPNEVPGLQVFKDDRWIDAKYIPNALIIHIGDQIEILSNGKYKAVLHRTTVNKDKTRMSWPVFLEPPADTVVGPLPQLVDDENPPKYKAKKFKDYSY 297 +L + V GLQVF D++W + P A +++IGD LSNG +K+ LHR VN++ R S FL P D VV P +++ K K +K+ D+++ Sbjct: 253 ILHQDHVNGLQVFVDNQWQSIRPNPKAFVVNIGDTFMALSNGIFKSCLHRAVVNRESARKSMAFFLCPKKDKVVKPPSDILE-----KMKTRKYPDFTW 346
BLAST of FC928897 vs. ExPASy Swiss-Prot
Match: GAOX2_ORYSJ (Gibberellin 20 oxidase 2 OS=Oryza sativa subsp. japonica GN=20ox2 PE=1 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 2.210e-12 Identity = 35/89 (39.33%), Postives = 51/89 (57.30%), Query Frame = 1 Query: 1 VLVPNEVPGLQVFKDDRWIDAKYIPNALIIHIGDQIEILSNGKYKAVLHRTTVNKDKTRMSWPVFLEPPADTVVGPLPQLVDDENPPKY 267 +L+ ++V GL+V D W +P A++I+IGD LSNG+YK+ LHR VN+ + R S FL P D VV P P ++ P + Sbjct: 257 ILLQDDVGGLEVLVDGEWRPVSPVPGAMVINIGDTFMALSNGRYKSCLHRAVVNQRRERRSLAFFLCPREDRVVRPPPSAATPQHYPDF 345
BLAST of FC928897 vs. ExPASy Swiss-Prot
Match: GAOX2_ORYSI (Gibberellin 20 oxidase 2 OS=Oryza sativa subsp. indica GN=20ox2 PE=1 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 2.210e-12 Identity = 35/89 (39.33%), Postives = 51/89 (57.30%), Query Frame = 1 Query: 1 VLVPNEVPGLQVFKDDRWIDAKYIPNALIIHIGDQIEILSNGKYKAVLHRTTVNKDKTRMSWPVFLEPPADTVVGPLPQLVDDENPPKY 267 +L+ ++V GL+V D W +P A++I+IGD LSNG+YK+ LHR VN+ + R S FL P D VV P P ++ P + Sbjct: 257 ILLQDDVGGLEVLVDGEWRPVSPVPGAMVINIGDTFMALSNGRYKSCLHRAVVNQRRERRSLAFFLCPREDRVVRPPPSAATPQHYPDF 345
BLAST of FC928897 vs. ExPASy Swiss-Prot
Match: ACCH1_ARATH (1-aminocyclopropane-1-carboxylate oxidase homolog 1 OS=Arabidopsis thaliana GN=At1g06620 PE=2 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 4.923e-12 Identity = 31/101 (30.69%), Postives = 57/101 (56.44%), Query Frame = 1 Query: 1 VLVPNEVPGLQVFKDDRWIDAKYIPNALIIHIGDQIEILSNGKYKAVLHRTTVNKDKTRMSWPVFLEP---PADTVVGPLPQLVDDENPPKYKAKKFKDYS 294 +L+ + + GLQV D W+D +P AL++++GD +++++N K+ +V HR N R+S F V GP+ +++ +ENPP Y+ +Y+ Sbjct: 246 ILLQDHIGGLQVLHDQYWVDVPPVPGALVVNVGDLLQLITNDKFISVEHRVLANVAGPRISVACFFSSYLMANPRVYGPIKEILSEENPPNYRDTTITEYA 346
BLAST of FC928897 vs. ExPASy Swiss-Prot
Match: ACCO_MUSAC (1-aminocyclopropane-1-carboxylate oxidase OS=Musa acuminata GN=MAO1B PE=3 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 6.430e-12 Identity = 34/90 (37.78%), Postives = 48/90 (53.33%), Query Frame = 1 Query: 13 NEVPGLQVFKDDRWIDAKYIPNALIIHIGDQIEILSNGKYKAVLHRTTVNKDKTRMSWPVFLEPPADTVVGPLPQLVDDENPPKYKAKKF 282 ++V GLQ+ KD RWID + + +A++I+ GDQIE+LSNG+YK+ HR R S F P + P +E P KF Sbjct: 190 DQVGGLQMLKDGRWIDVQPLADAIVINTGDQIEVLSNGRYKSAWHRVLATSHGNRRSIASFYNPSLKATIAPAAGAATEEAAPPALYPKF 279
BLAST of FC928897 vs. ExPASy Swiss-Prot
Match: GAO1B_WHEAT (Gibberellin 20 oxidase 1-B OS=Triticum aestivum GN=GA20ox1B PE=2 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 8.398e-12 Identity = 38/89 (42.70%), Postives = 48/89 (53.93%), Query Frame = 1 Query: 1 VLVPNEVPGLQVFKDDRWIDAKYIPNALIIHIGDQIEILSNGKYKAVLHRTTVNKDKTRMSWPVFLEPPADTVVGPLPQLVDDENPPKY 267 +L + V GLQV + RW + +A +++IGD LSNG+YK+ LHR VN R S FL P D VV P LVD NP Y Sbjct: 232 ILHQDNVGGLQVHTEGRWRSIRPRADAFVVNIGDTFMALSNGRYKSCLHRAVVNSKVPRKSLAFFLCPEMDKVVAPPGTLVDAANPRAY 320
BLAST of FC928897 vs. ExPASy Swiss-Prot
Match: GAO1A_WHEAT (Gibberellin 20 oxidase 1-A OS=Triticum aestivum GN=GA20ox1A PE=2 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 8.398e-12 Identity = 38/89 (42.70%), Postives = 48/89 (53.93%), Query Frame = 1 Query: 1 VLVPNEVPGLQVFKDDRWIDAKYIPNALIIHIGDQIEILSNGKYKAVLHRTTVNKDKTRMSWPVFLEPPADTVVGPLPQLVDDENPPKY 267 +L + V GLQV + RW + +A +++IGD LSNG+YK+ LHR VN R S FL P D VV P LVD NP Y Sbjct: 232 ILHQDNVGGLQVHTEGRWRSIRPRADAFVVNIGDTFMALSNGRYKSCLHRAVVNSRVPRKSLAFFLCPEMDKVVAPPGTLVDASNPRAY 320 The following BLAST results are available for this feature:
BLAST of FC928897 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 64
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Sequences
The
following sequences are available for this feature:
EST sequence >FC928897 ID=FC928897; Name=FC928897; organism=Citrus clementina; type=EST; length=498bpback to top |