FC928901
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC928901 vs. ExPASy Swiss-Prot
Match: EF1A_METLZ (Elongation factor 1-alpha OS=Methanocorpusculum labreanum (strain ATCC 43576 / DSM 4855 / Z) GN=tuf PE=3 SV=1) HSP 1 Score: 303.138 bits (775), Expect = 1.264e-81 Identity = 145/276 (52.54%), Postives = 192/276 (69.57%), Query Frame = 1 Query: 25 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPISGFEGDNMIERSTNLDWYKGPTLLDALDNINEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFGPSGLTTE 852 M K H+N+ VIGH+D GKSTT G ++++ G + + +++ ++KEA K +F++AWV+D LK ERERGITIDIA KFET KY TV+D PGHRDF+KNMITG SQAD A++++ T G E QT+EH L+ TLG+ Q+I NKMDA YS+ +Y+E +++ + VG+ P + PF+PIS F GDN+ E S N WYKGPTLL ALD P P+DKPLRLP+QDVY I G+GTVPVGRVETG+LK G ++F P+ +T E Sbjct: 1 MAAAKPHMNLAVIGHIDHGKSTTVGRILFETGVVQQHILDGYKKEAESKGKATFEFAWVMDSLKEERERGITIDIAHKKFETPKYNFTVVDCPGHRDFVKNMITGASQADAAIIVVSGTEGPME-------QTKEHVFLSKTLGINQIIVAINKMDAV--NYSEEKYNEAKDKMTKLIMSVGFKPAETPFIPISAFCGDNIKEASANTPWYKGPTLLAALDLFKMPDMPTDKPLRLPIQDVYTISGVGTVPVGRVETGILKKGQKISFMPANVTGE 267
BLAST of FC928901 vs. ExPASy Swiss-Prot
Match: EF1A_METPE (Elongation factor 1-alpha OS=Methanosphaerula palustris (strain ATCC BAA-1556 / DSM 19958 / E1-9c) GN=tuf PE=3 SV=1) HSP 1 Score: 302.368 bits (773), Expect = 2.157e-81 Identity = 142/271 (52.40%), Postives = 191/271 (70.48%), Query Frame = 1 Query: 25 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPISGFEGDNMIERSTNLDWYKGPTLLDALDNINEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFGPS 837 M +K H+N+ VIGH+D GKSTT G L+++ G + +IE F KEA K SF++AWV+D LK ERERGITIDIA +F+T K+Y TV+D PGHRDF+KNMITG SQAD A+L++ + G E QT+EH LA TLG+ Q++ NKMDA Y + R++E+ KE++ + VGY ++ F+P+S F+G N+ ++S WY GPTLL+ALD EP +P+DKP RLP+QDVY I GIGTVPVGR+ETG++K GM V+F P+ Sbjct: 1 MANDKPHMNLAVIGHIDHGKSTTVGRLMFETGAVPAHIIENFRKEAESKGKGSFEFAWVMDNLKEERERGITIDIAHKRFDTAKFYFTVVDCPGHRDFVKNMITGASQADAAILVVAAPDGVME-------QTKEHVFLARTLGITQLVIAINKMDAV--NYDQKRFEEVKKELTQLIGMVGYKAAEILFIPMSSFKGVNISKKSPETPWYTGPTLLEALDTFKEPDKPTDKPFRLPIQDVYSISGIGTVPVGRIETGIMKKGMKVSFMPA 262
BLAST of FC928901 vs. ExPASy Swiss-Prot
Match: EF1A_THESM (Elongation factor 1-alpha OS=Thermococcus sibiricus (strain MM 739 / DSM 12597) GN=tuf PE=3 SV=1) HSP 1 Score: 301.212 bits (770), Expect = 4.804e-81 Identity = 153/271 (56.46%), Postives = 197/271 (72.69%), Query Frame = 1 Query: 25 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPISGFEGDNMIERSTNLDWYKGPTLLDALDNINEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFGPS 837 M KEK H+NIV IGHVD GKSTT G L++ I +++I++FE E E K SFK+AWV+D+LK ERERGITID+A KFET Y T+IDAPGHRDF+KNMITG SQAD AVLI+ +T G QT+EHA LA TLG+ +I NKMDA KY + R+ E+ +V+ L+ +GY + P +PIS +EGDN++++S + WY GPTL++ALD I EP++P+DKPLR+P+QDVY I G+GTVPVGRVETGVLK G V+ F P+ Sbjct: 1 MAKEKPHVNIVFIGHVDHGKSTTIGRLLFDTANIPEQIIKKFE-EMGEKGK-SFKFAWVMDRLKEERERGITIDVAHTKFETPHRYITIIDAPGHRDFVKNMITGASQADAAVLIVAATDGVMP-------QTKEHAFLARTLGINHIIVGVNKMDAV--KYDEKRFKEVATQVTKLLQMLGY--KNFPVIPISAWEGDNVVKKSDKMPWYNGPTLIEALDQIPEPEKPTDKPLRIPIQDVYSIKGVGTVPVGRVETGVLKVGDVIIFEPA 258
BLAST of FC928901 vs. ExPASy Swiss-Prot
Match: EF1A_SULAC (Elongation factor 1-alpha OS=Sulfolobus acidocaldarius GN=tuf PE=3 SV=1) HSP 1 Score: 301.212 bits (770), Expect = 4.804e-81 Identity = 138/269 (51.30%), Postives = 194/269 (72.12%), Query Frame = 1 Query: 34 EKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPISGFEGDNMIERSTNLDWYKGPTLLDALDNINEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFGPSG 840 +K H+N++VIGHVD GKST G L+ G ID++ ++ E+ A ++ K S KYA+++D+LK ERERG+TI+++ +FET KY+ TVIDAPGHRDF+KNMITG SQAD A+L++ + G +EAG+S +GQTREH +L+ T+G+ Q+I NKMD Y + R+ EIV VS ++K G++ KV FVP+ +GDN+ +ST + WY GPTL + LD + P +P DKPLR+P+Q+VY I G+G VPVGR+E+GVLK G + F P G Sbjct: 3 QKPHLNLIVIGHVDHGKSTLIGRLLMDRGFIDEKTVKEAEEAAKKLGKDSEKYAFLMDRLKEERERGVTINLSFMRFETRKYFFTVIDAPGHRDFVKNMITGASQADAAILVVSAKKGEYEAGMSAEGQTREHIILSKTMGINQVIVAINKMDLADTPYDEKRFKEIVDTVSKFMKSFGFDMNKVKFVPVVAPDGDNVTHKSTKMPWYNGPTLEELLDQLEIPPKPVDKPLRIPIQEVYSISGVGVVPVGRIESGVLKVGDKIVFMPVG 271
BLAST of FC928901 vs. ExPASy Swiss-Prot
Match: EF1A_METBF (Elongation factor 1-alpha OS=Methanosarcina barkeri (strain Fusaro / DSM 804) GN=tuf PE=3 SV=1) HSP 1 Score: 300.827 bits (769), Expect = 6.275e-81 Identity = 145/276 (52.54%), Postives = 190/276 (68.84%), Query Frame = 1 Query: 25 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPISGFEGDNMIERSTNLDWYKGPTLLDALDNINEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFGPSGLTTE 852 M +K H+N+ VIGH+D GKST G L+Y G + VIE++++EA + K SF +AWV+D LK ERERGITIDIA +F+T KYY TV+D PGHRDF+KNMITG SQAD AVL++ + G QT+EH L+ TLG+ Q+I NKMDA +YS+ RY E+V++VS LK +G+ P +PFVP S F GDN++ S WYKG T+++AL+N+ P++PS PLR+P++D Y I GIGTVPVGRVETG +K G V F P G E Sbjct: 1 MAADKPHMNLAVIGHIDHGKSTFVGRLMYDAGAVPAHVIEKYKEEAKQKGKESFAFAWVMDSLKEERERGITIDIAHKRFDTDKYYFTVVDCPGHRDFVKNMITGASQADAAVLVVAAPDGVM-------AQTKEHIFLSRTLGINQLIVAINKMDAV--EYSEKRYKEVVEQVSGILKMIGFKPGDIPFVPTSAFYGDNVVNHSEKTPWYKGVTMMEALNNLKVPEKPSTLPLRIPVEDAYTISGIGTVPVGRVETGTMKKGDKVVFMPGGAAGE 267
BLAST of FC928901 vs. ExPASy Swiss-Prot
Match: EF1A_ARCFU (Elongation factor 1-alpha OS=Archaeoglobus fulgidus GN=tuf PE=3 SV=1) HSP 1 Score: 300.442 bits (768), Expect = 8.195e-81 Identity = 146/276 (52.90%), Postives = 190/276 (68.84%), Query Frame = 1 Query: 25 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPISGFEGDNMIERSTNLDWYKGPTLLDALDNINEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFGPSGLTTE 852 M KEK HIN+ IGHVD GKST G L+Y+ G I + +IE+ KEA E K +F++AWV+D+LK ERERG+TID+A KF+T KYY T++D PGHRDFIKNMITG SQAD AVL++D QTREH LA TLG+ Q+I NKMD Y + Y+ + VS LK VGY +++PF+P+S + GDN+ ++S WY GPTLL+A D + P++ DKPLR+P+QDVY I G+GTVPVGRVE+GVL+ G V F P+G++ E Sbjct: 1 MAKEKEHINVAFIGHVDHGKSTLIGRLLYETGEIPEHIIEKMRKEAQEKGKATFEFAWVMDRLKEERERGVTIDVAHRKFQTDKYYITIVDCPGHRDFIKNMITGASQADAAVLVMDVVE-------KVQPQTREHIFLARTLGINQIIVAINKMDRV--NYDQKEYEAAKEAVSKLLKMVGYKVDEIPFIPVSAYYGDNVAKKSDKTPWYNGPTLLEAFDLLKPPEKLVDKPLRIPIQDVYSISGVGTVPVGRVESGVLRVGDKVVFEPAGVSGE 267
BLAST of FC928901 vs. ExPASy Swiss-Prot
Match: EF1A_PYRFU (Elongation factor 1-alpha OS=Pyrococcus furiosus GN=tuf PE=3 SV=1) HSP 1 Score: 298.13 bits (762), Expect = 4.067e-80 Identity = 151/271 (55.72%), Postives = 196/271 (72.32%), Query Frame = 1 Query: 25 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPISGFEGDNMIERSTNLDWYKGPTLLDALDNINEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFGPS 837 M K+K H+NIV IGHVD GKSTT G L+Y G I +++I++FE E E K SFK+AWV+D+LK ERERGITID+A KFET Y T+IDAPGHRDF+KNMITG SQAD AVL++ +T G QT+EHA LA TLG+K +I NKMD Y++ R++E+ +V LK +GY + P +PIS +EG+N++++S + WY GPTL++ALD I EP++P DKPLR+P+QDVY I G+GTVPVGRVETG L+ G VV F P+ Sbjct: 1 MPKDKPHVNIVFIGHVDHGKSTTIGRLLYDTGNIPEQIIKKFE-EMGEKGK-SFKFAWVMDRLKEERERGITIDVAHTKFETPHRYITIIDAPGHRDFVKNMITGASQADAAVLVVAATDGVMP-------QTKEHAFLARTLGIKHIIVAINKMDMVN--YNQKRFEEVKAQVEKLLKMLGY--KDFPVIPISAWEGENVVKKSDKMPWYNGPTLIEALDQIPEPEKPVDKPLRIPIQDVYSIKGVGTVPVGRVETGKLRVGEVVIFEPA 258
BLAST of FC928901 vs. ExPASy Swiss-Prot
Match: EF1A_PYRWO (Elongation factor 1-alpha OS=Pyrococcus woesei GN=tuf PE=3 SV=1) HSP 1 Score: 296.975 bits (759), Expect = 9.061e-80 Identity = 150/271 (55.35%), Postives = 196/271 (72.32%), Query Frame = 1 Query: 25 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPISGFEGDNMIERSTNLDWYKGPTLLDALDNINEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFGPS 837 M K+K H+NIV IGHVD GKSTT G L+Y G I +++I++FE E E K SFK+AWV+D+L+ ERERGITID+A KFET Y T+IDAPGHRDF+KNMITG SQAD AVL++ +T G QT+EHA LA TLG+K +I NKMD Y++ R++E+ +V LK +GY + P +PIS +EG+N++++S + WY GPTL++ALD I EP++P DKPLR+P+QDVY I G+GTVPVGRVETG L+ G VV F P+ Sbjct: 3 MPKDKPHVNIVFIGHVDHGKSTTIGRLLYDTGNIPEQIIKKFE-EMGEKGK-SFKFAWVMDRLREERERGITIDVAHTKFETPHRYITIIDAPGHRDFVKNMITGASQADAAVLVVAATDGVMP-------QTKEHAFLARTLGIKHIIVAINKMDMVN--YNQKRFEEVKAQVEKLLKMLGY--KDFPVIPISAWEGENVVKKSDKMPWYNGPTLIEALDQIPEPEKPVDKPLRIPIQDVYSIKGVGTVPVGRVETGKLRVGEVVIFEPA 260
BLAST of FC928901 vs. ExPASy Swiss-Prot
Match: EF1A_META3 (Elongation factor 1-alpha OS=Methanococcus aeolicus (strain Nankai-3 / ATCC BAA-1280) GN=tuf PE=3 SV=1) HSP 1 Score: 294.664 bits (753), Expect = 4.497e-79 Identity = 148/277 (53.43%), Postives = 194/277 (70.04%), Query Frame = 1 Query: 25 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSS-YLKKVGYNPEKVPFVPISGFEGDNMIERSTNLDWYKGPTLLDALDNINEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFGPSGLTTE 852 M KEK +N+ IGHVD+GKSTT G L+ G ID ++IER ++EA+E K F++A+V+D LK ERERG+TIDIA KFE+ KY T++D PGHRDFIKNMITG SQAD AVL+ D +A QTREH L TLGV Q+ NKMD T YS+ Y +V +S+ LK +GYNP + FVP++ F GDN +++S + WYKGPTL++ +D N P++P++ PLR+P+QDVY I G+GTVPVGRVETGV+KPG V F P+G++ E Sbjct: 1 MAKEKPVLNVAFIGHVDAGKSTTVGRLLLDSGTIDPQIIERLKREASEKGKAGFEFAYVMDGLKEERERGVTIDIAHKKFESKKYDVTIVDCPGHRDFIKNMITGASQADAAVLVCDVN----DAKTGLQPQTREHIFLIRTLGVNQLAVAINKMD--TVDYSEEEYKAMVDMLSNQLLKMLGYNPANIHFVPVASFVGDNNVKKSDKMPWYKGPTLVEVIDTFNPPEKPTNLPLRMPIQDVYTITGVGTVPVGRVETGVMKPGDKVVFEPAGVSGE 271
BLAST of FC928901 vs. ExPASy Swiss-Prot
Match: EF1A_PYRKO (Elongation factor 1-alpha OS=Pyrococcus kodakaraensis GN=tuf PE=3 SV=1) HSP 1 Score: 293.893 bits (751), Expect = 7.670e-79 Identity = 149/271 (54.98%), Postives = 192/271 (70.85%), Query Frame = 1 Query: 25 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPISGFEGDNMIERSTNLDWYKGPTLLDALDNINEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFGPS 837 M KEK H+NIV IGHVD GKSTT G L++ I + +I++FE E E K SFK+AWV+D+LK ERERGITID+A KFET Y T+IDAPGHRDF+KNMITG SQAD AVL++ +T G QT+EHA LA TLG+ +I NKMD Y + ++ ++ ++V L+ +GY + P +PIS +EGDN++++S + WY GPTLL+ALD I EP +P DKPLR+P+QDVY I G+GTVPVGRVETGVL+ G VV F P+ Sbjct: 1 MAKEKPHVNIVFIGHVDHGKSTTIGRLLFDTANIPENIIKKFE-EMGEKGK-SFKFAWVMDRLKEERERGITIDVAHTKFETPHRYITIIDAPGHRDFVKNMITGASQADAAVLVVAATDGVMP-------QTKEHAFLARTLGINHIIVAINKMDMVN--YDEKKFKQVAEQVKKLLQMLGY--KDFPIIPISAWEGDNVVKKSDKMPWYNGPTLLEALDQIPEPPKPVDKPLRIPIQDVYSIKGVGTVPVGRVETGVLRVGDVVIFEPA 258 The following BLAST results are available for this feature:
BLAST of FC928901 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC928901 ID=FC928901; Name=FC928901; organism=Citrus clementina; type=EST; length=854bpback to top |