FC928901
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC928901 vs. ExPASy Swiss-Prot
Match: EFTU_PEDPA (Elongation factor Tu OS=Pediococcus pentosaceus (strain ATCC 25745 / 183-1w) GN=tuf PE=3 SV=1) HSP 1 Score: 137.117 bits (344), Expect = 1.200e-31 Identity = 95/268 (35.45%), Postives = 139/268 (51.87%), Query Frame = 1 Query: 31 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFV---PISGFEGDNMIERSTNLDWYKGPTLLDALDNINE----PKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPG 813 + K H+NI IGHVD GK+T T I K + E+ +A++ YA + D E+ERGITI+ A ++ET K + IDAPGH D++KNMITG +Q D A+L++ +T G QTREH LLA +GV ++ NK D D + EV L + + + VP + + EGD E+ ++D +D I+E P+R +DKP +P++DV+ I G GTV GR++ G +K G Sbjct: 8 RTKPHVNIGTIGHVDHGKTTLTA-------AITKVLSEKGLAKASD-------YADI-DAAPEEKERGITINTAHVEYETEKRHYAHIDAPGHADYVKNMITGAAQMDGAILVVAATDGPMP-------QTREHILLAHQVGVDYIVVFLNKTDLVD---DDELVDLVEMEVRELLSEYDFPGDDVPVLRGSALKALEGDAEQEK----------VIMDLMDTIDEYIPTPERSTDKPFLMPVEDVFTITGRGTVASGRIDRGEIKVG 240
BLAST of FC928901 vs. ExPASy Swiss-Prot
Match: EFTU_MACCJ (Elongation factor Tu OS=Macrococcus caseolyticus (strain JCSC5402) GN=tuf PE=3 SV=1) HSP 1 Score: 137.117 bits (344), Expect = 1.200e-31 Identity = 98/279 (35.13%), Postives = 139/279 (49.82%), Query Frame = 1 Query: 31 KEKTHINIVVIGHVDSGKSTTTGH----LIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPISGFEGDNMIERSTNLDWYKGPTLLDALDN-INEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFGPSGLTTE 852 + KTH NI IGHVD GK+T T L KLGG RS+ +D E+ERGITI+ + ++ET K + +D PGH D++KNMITG +Q D +L++ + G QTREH LL+ +GV ++ NK+D + + + EV L + + + VP + S + +E + K L+DA+D I P+R SDKP +P++DV+ I G GTV GRVE G +K G V GLT E Sbjct: 8 RSKTHANIGTIGHVDHGKTTLTAAIATVLSKKLGG----------------EARSYDQ---IDNAPEEKERGITINTSHIEYETEKRHYAHVDCPGHADYVKNMITGAAQMDGGILVVSAADGPMP-------QTREHILLSRNVGVPALVVFLNKVDMVD---DEELLELVEMEVRDLLSEYDFPGDDVPVIAGSALKALEGVEEYED----KIMELMDAVDEYIPTPERDSDKPFMMPVEDVFSITGRGTVATGRVERGQVKVGEEVEI--IGLTEE 251
BLAST of FC928901 vs. ExPASy Swiss-Prot
Match: EFTU_GEOMG (Elongation factor Tu OS=Geobacter metallireducens (strain GS-15 / ATCC 53774 / DSM 7210) GN=tuf1 PE=3 SV=1) HSP 1 Score: 137.117 bits (344), Expect = 1.200e-31 Identity = 92/262 (35.11%), Postives = 130/262 (49.62%), Query Frame = 1 Query: 31 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPISGFEGDNMIERSTNLDWYKGPTLLDALD-NINEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPG 813 + K H+NI IGHVD GK+T T + L AE + FK +D ERERGITI + ++ET K + +D PGH D++KNMITG +Q D A+L++ + G QTREH LLA +GV ++ NK D + + + E+ L + + +P + S + N L L+DA+D I EP+R DKP +P++DV+ I G GTV GRVE GV+K G Sbjct: 8 RTKPHVNIGTIGHVDHGKTTLTAAITRVL---------------AERGQAEFKGFDQIDNAPEERERGITIATSHVEYETEKRHYAHVDCPGHADYVKNMITGAAQMDGAILVVSAADGPMP-------QTREHILLARQVGVPYIVVFLNKADMVD---DEELLELVELEIRELLSSYDFPGDDIPIIKGSALKALN--GDKDELGSEAIVKLMDAVDAYIPEPERAIDKPFLMPVEDVFSISGRGTVATGRVERGVVKVG 242
BLAST of FC928901 vs. ExPASy Swiss-Prot
Match: EFTU_EUBE2 (Elongation factor Tu OS=Eubacterium eligens (strain ATCC 27750 / VPI C15-48) GN=tuf PE=3 SV=1) HSP 1 Score: 137.117 bits (344), Expect = 1.200e-31 Identity = 93/262 (35.50%), Postives = 131/262 (50.00%), Query Frame = 1 Query: 31 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPISGFEGDNMIERSTNLDWYKGPTLLDALDNINE----PKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVL 804 + K H NI IGHVD GK+T T I K + ER A + +DK ERERGITI A ++ET K + +D PGH D++KNMITG +Q D +L++ +T G QTREH LLA +GV ++ NK D D ++E+ L + G+ + P + S + N +W G +L+ + I+E P+R +DKP +P++DV+ I G GTV GRVE GVL Sbjct: 8 RTKPHCNIGTIGHVDHGKTTLTA-------AITKTLHERLGTGEAVAFEN-------IDKAPEERERGITISTAHVEYETEKRHYAHVDCPGHADYVKNMITGAAQMDAGILVVAATDGVM-------AQTREHILLARQVGVPYIVVFMNKCDMVDDPELLELVDMEIREL---LNEYGFPGDDTPIIQGSALKA----LEDPNSEW--GDKILELMHTIDEYVPDPERDTDKPFLMPVEDVFSITGRGTVATGRVERGVL 239
BLAST of FC928901 vs. ExPASy Swiss-Prot
Match: EFTU_ARATH (Elongation factor Tu, chloroplastic OS=Arabidopsis thaliana GN=TUFA PE=1 SV=1) HSP 1 Score: 137.117 bits (344), Expect = 1.200e-31 Identity = 92/272 (33.82%), Postives = 137/272 (50.37%), Query Frame = 1 Query: 31 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVK-EVSSYLKKVGYNPEKVPFV------PISGFEGDNMIERSTNLDWYKGPTLLDALDN-INEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVV 822 ++K H+NI IGHVD GK+T T L L I V +++++ +D ER RGITI+ A ++ET + +D PGH D++KNMITG +Q D A+L++ G QT+EH LLA +GV M+ NK D + A E+V+ EV L +N + +P + + + ++R N K L+DA+D+ I P+R ++ P L ++DV+ I G GTV GRVE G +K G V Sbjct: 75 RKKPHVNIGTIGHVDHGKTTLTAALTMALASIGSSVAKKYDE---------------IDAAPEERARGITINTATVEYETENRHYAHVDCPGHADYVKNMITGAAQMDGAILVVSGADGPMP-------QTKEHILLAKQVGVPDMVVFLNKED----QVDDAELLELVELEVRELLSSYEFNGDDIPIISGSALLAVETLTENPKVKRGDNKWVDKIYELMDAVDDYIPIPQRQTELPFLLAVEDVFSITGRGTVATGRVERGTVKVGETV 320
BLAST of FC928901 vs. ExPASy Swiss-Prot
Match: EFTU1_DESPS (Elongation factor Tu 1 OS=Desulfotalea psychrophila GN=tuf1 PE=3 SV=1) HSP 1 Score: 137.117 bits (344), Expect = 1.200e-31 Identity = 90/269 (33.46%), Postives = 135/269 (50.19%), Query Frame = 1 Query: 31 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKV----GYNPEKVPFVPISGFEGDNMIERSTNLDWYKGPTLLDALDNIN----EPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPG 813 + K H+N+ IGH+D GK+T T + L + + SF +DK E+ERGITI A ++ET + +D PGH D+IKNMITG +Q D A+L++ +T G QTREH LLA +GV M+ NK D DE+++ V L+++ + + VPF+ G ++ D K + + +D I+ EP+R D+P +P++DV+ I G GTV GRVE G++K G Sbjct: 8 RTKPHVNVGTIGHIDHGKTTLTAAITRVL---------------STKGQASFTDFSDIDKAPEEKERGITIATAHVEYETVNRHYAHVDCPGHADYIKNMITGAAQMDGAILVVAATDGAMP-------QTREHILLARQVGVPAMVVFLNKCDMVDD-------DELIELVEMELRELLDDYEFPGDDVPFI-----HGSALLALENPEDEDKAACIWELMDQIDSYIPEPERDVDQPFLMPVEDVFSISGRGTVATGRVERGIIKVG 242
BLAST of FC928901 vs. ExPASy Swiss-Prot
Match: EFTU_STRMU (Elongation factor Tu OS=Streptococcus mutans GN=tuf PE=3 SV=2) HSP 1 Score: 136.732 bits (343), Expect = 1.567e-31 Identity = 93/263 (35.36%), Postives = 135/263 (51.33%), Query Frame = 1 Query: 31 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFV---PISGFEGDNMIERSTNLDWYKGPTLLDALDN-INEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLK 807 + K H+NI IGHVD GK+T T + V+ R A K +D ERERGITI+ A ++ET K + IDAPGH D++KNMITG +Q D A+L++ ST G QTREH LL+ +GVK +I NK+D + + + E+ L + + + +P + + EGD E L+ +D+ I +P+R +DKPL LP++DV+ I G GTV GR++ G +K Sbjct: 8 RSKPHVNIGTIGHVDHGKTTLTAAIT--------TVLARRLPSAVNQPKDYSS----IDAAPEERERGITINTAHVEYETEKRHYAHIDAPGHADYVKNMITGAAQMDGAILVVASTDGPMP-------QTREHILLSRQVGVKYLIVFMNKVDLVD---DEELLELVEMEIRDLLSEYDFPGDDIPVIQGSALKALEGDTAQEDII-------MELMHTVDDYIPDPERDTDKPLLLPVEDVFSITGRGTVASGRIDRGTVK 241
BLAST of FC928901 vs. ExPASy Swiss-Prot
Match: EFTU_STRA5 (Elongation factor Tu OS=Streptococcus agalactiae serotype V GN=tuf PE=3 SV=1) HSP 1 Score: 136.732 bits (343), Expect = 1.567e-31 Identity = 94/267 (35.21%), Postives = 138/267 (51.69%), Query Frame = 1 Query: 31 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFV---PISGFEGDN-----MIERSTNLDWYKGPTLLDALDNINEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLK 807 + K H+NI IGHVD GK+T T + V+ R + K YA + D ERERGITI+ A ++ET K + IDAPGH D++KNMITG +Q D A+L++ ST G QTREH LL+ +GVK +I NK+D + + + E+ L + + + +P + + EGD ++E + +D Y I EP+R +DKPL LP++DV+ I G GTV GR++ G ++ Sbjct: 8 RSKPHVNIGTIGHVDHGKTTLTAAIT--------TVLARRLPTSVNQPK---DYASI-DAAPEERERGITINTAHVEYETEKRHYAHIDAPGHADYVKNMITGAAQMDGAILVVASTDGPMP-------QTREHILLSRQVGVKHLIVFMNKVDLVD---DEELLELVEMEIRDLLSEYDFPGDDLPVIQGSALKALEGDEKYEDIIMELMSTVDEY-----------IPEPERDTDKPLLLPVEDVFSITGRGTVASGRIDRGTVR 241
BLAST of FC928901 vs. ExPASy Swiss-Prot
Match: EFTU_STRA3 (Elongation factor Tu OS=Streptococcus agalactiae serotype III GN=tuf PE=3 SV=1) HSP 1 Score: 136.732 bits (343), Expect = 1.567e-31 Identity = 94/267 (35.21%), Postives = 138/267 (51.69%), Query Frame = 1 Query: 31 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFV---PISGFEGDN-----MIERSTNLDWYKGPTLLDALDNINEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLK 807 + K H+NI IGHVD GK+T T + V+ R + K YA + D ERERGITI+ A ++ET K + IDAPGH D++KNMITG +Q D A+L++ ST G QTREH LL+ +GVK +I NK+D + + + E+ L + + + +P + + EGD ++E + +D Y I EP+R +DKPL LP++DV+ I G GTV GR++ G ++ Sbjct: 8 RSKPHVNIGTIGHVDHGKTTLTAAIT--------TVLARRLPTSVNQPK---DYASI-DAAPEERERGITINTAHVEYETEKRHYAHIDAPGHADYVKNMITGAAQMDGAILVVASTDGPMP-------QTREHILLSRQVGVKHLIVFMNKVDLVD---DEELLELVEMEIRDLLSEYDFPGDDLPVIQGSALKALEGDEKYEDIIMELMSTVDEY-----------IPEPERDTDKPLLLPVEDVFSITGRGTVASGRIDRGTVR 241
BLAST of FC928901 vs. ExPASy Swiss-Prot
Match: EFTU_STRA1 (Elongation factor Tu OS=Streptococcus agalactiae serotype Ia GN=tuf PE=3 SV=1) HSP 1 Score: 136.732 bits (343), Expect = 1.567e-31 Identity = 94/267 (35.21%), Postives = 138/267 (51.69%), Query Frame = 1 Query: 31 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFV---PISGFEGDN-----MIERSTNLDWYKGPTLLDALDNINEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLK 807 + K H+NI IGHVD GK+T T + V+ R + K YA + D ERERGITI+ A ++ET K + IDAPGH D++KNMITG +Q D A+L++ ST G QTREH LL+ +GVK +I NK+D + + + E+ L + + + +P + + EGD ++E + +D Y I EP+R +DKPL LP++DV+ I G GTV GR++ G ++ Sbjct: 8 RSKPHVNIGTIGHVDHGKTTLTAAIT--------TVLARRLPTSVNQPK---DYASI-DAAPEERERGITINTAHVEYETEKRHYAHIDAPGHADYVKNMITGAAQMDGAILVVASTDGPMP-------QTREHILLSRQVGVKHLIVFMNKVDLVD---DEELLELVEMEIRDLLSEYDFPGDDLPVIQGSALKALEGDEKYEDIIMELMSTVDEY-----------IPEPERDTDKPLLLPVEDVFSITGRGTVASGRIDRGTVR 241 The following BLAST results are available for this feature:
BLAST of FC928901 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC928901 ID=FC928901; Name=FC928901; organism=Citrus clementina; type=EST; length=854bpback to top |