FC928901
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC928901 vs. ExPASy Swiss-Prot
Match: EFTU_PLARO (Elongation factor Tu OS=Planobispora rosea GN=tuf PE=3 SV=2) HSP 1 Score: 136.346 bits (342), Expect = 2.047e-31 Identity = 94/261 (36.02%), Postives = 138/261 (52.87%), Query Frame = 1 Query: 31 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRS-FKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPISGFEGDNMIERSTNLDWYKGPTLLDALD-NINEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLK 807 + K H+NI IGH+D GK+T T I K + +R+ E+NK + F +DK E+ RGITI IA +++T K + +D PGH D++KNMITG +Q D A+L++ +T G QT+EH LLA +GV ++ NK D + + V+E+ S + G + V + EGD S L++A+D NI EP R +DKP +P++DV+ I G GTV GR+E GV+K Sbjct: 8 RTKPHMNIGTIGHIDHGKTTLTA-------AITKVLHDRYP----ELNKATPFDK---IDKAPEEKARGITISIAHVEYQTEKRHYAHVDCPGHADYVKNMITGAAQMDGAILVVAATDGPMP-------QTKEHVLLARQVGVPYIVVALNKADMVDDEEILELVELEVRELLSAQEFPGDDLPVVRVSALKALEGDEKWADSI-------IELMNAVDENIPEPPRDTDKPFLMPIEDVFSITGRGTVVTGRIERGVVK 240
BLAST of FC928901 vs. ExPASy Swiss-Prot
Match: EFTU_MYCLE (Elongation factor Tu OS=Mycobacterium leprae GN=tuf PE=3 SV=2) HSP 1 Score: 136.346 bits (342), Expect = 2.047e-31 Identity = 99/264 (37.50%), Postives = 142/264 (53.79%), Query Frame = 1 Query: 31 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNK-RSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPIS---GFEGDNMIERSTNLDWYKGPT-LLDALD-NINEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVL 804 + K H+NI IGHVD GK+T T I K + ++F +N+ R+F +D ER+RGITI+I+ +++T K + +DAPGH D+IKNMITG +Q D A+L++ +T G QTREH LLA +GV ++ NK DA + + + EV L ++ E P V +S EGD W + T L+DA+D +I P R +DKP +P++DV+ I G GTV GRVE GV+ Sbjct: 8 RTKPHVNIGTIGHVDHGKTTLTA-------AITKVLHDKFPN----LNESRAFDQ---IDNAPEERQRGITINISHVEYQTEKRHYAHVDAPGHADYIKNMITGAAQMDGAILVVAATDGPMP-------QTREHVLLARQVGVPYILVALNKSDAVD---DEELLELVEMEVRELLAAQEFD-EDAPVVRVSALKALEGD--------AKWVESVTQLMDAVDESIPAPVRETDKPFLMPVEDVFTITGRGTVVTGRVERGVV 238
BLAST of FC928901 vs. ExPASy Swiss-Prot
Match: EFTU_MYCLB (Elongation factor Tu OS=Mycobacterium leprae (strain Br4923) GN=tuf PE=3 SV=1) HSP 1 Score: 136.346 bits (342), Expect = 2.047e-31 Identity = 99/264 (37.50%), Postives = 142/264 (53.79%), Query Frame = 1 Query: 31 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNK-RSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPIS---GFEGDNMIERSTNLDWYKGPT-LLDALD-NINEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVL 804 + K H+NI IGHVD GK+T T I K + ++F +N+ R+F +D ER+RGITI+I+ +++T K + +DAPGH D+IKNMITG +Q D A+L++ +T G QTREH LLA +GV ++ NK DA + + + EV L ++ E P V +S EGD W + T L+DA+D +I P R +DKP +P++DV+ I G GTV GRVE GV+ Sbjct: 8 RTKPHVNIGTIGHVDHGKTTLTA-------AITKVLHDKFPN----LNESRAFDQ---IDNAPEERQRGITINISHVEYQTEKRHYAHVDAPGHADYIKNMITGAAQMDGAILVVAATDGPMP-------QTREHVLLARQVGVPYILVALNKSDAVD---DEELLELVEMEVRELLAAQEFD-EDAPVVRVSALKALEGD--------AKWVESVTQLMDAVDESIPAPVRETDKPFLMPVEDVFTITGRGTVVTGRVERGVV 238
BLAST of FC928901 vs. ExPASy Swiss-Prot
Match: EFTU_LEPBP (Elongation factor Tu OS=Leptospira biflexa serovar Patoc (strain Patoc 1 / ATCC 23582 / Paris) GN=tuf PE=3 SV=1) HSP 1 Score: 136.346 bits (342), Expect = 2.047e-31 Identity = 90/260 (34.62%), Postives = 130/260 (50.00%), Query Frame = 1 Query: 31 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPISGFEGDNMIERSTNLDWYKGPTLLDALDN-INEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLK 807 + K H+NI IGHVD GK+T T + L K NK + Y + D E+ RGITI + ++ET + +D PGH D++KNMITG +Q D A+L++ +T G QT+EH LLA +GV ++ NK D + + +E+ L K + +K PF ISG + ++L L++A+D + P R DKP +P++DV+ I G GTV GRVE GVLK Sbjct: 8 RSKPHLNIGTIGHVDHGKTTLTAAITTTLA-----------KLVGGKNK-AIAYDQI-DNAPEEKARGITIATSHQEYETPNRHYAHVDCPGHADYVKNMITGAAQMDAAILVVSATDGAMP-------QTKEHILLARQVGVPYIVVYLNKADMLAADERDDMVEMVKEEIKDLLNKYNFPGDKTPF--ISGSALKALEGEDSDLGMKSILKLMEAVDTYVPNPTRIVDKPFLMPVEDVFSITGRGTVATGRVEQGVLK 245
BLAST of FC928901 vs. ExPASy Swiss-Prot
Match: EFTU_LEPBA (Elongation factor Tu OS=Leptospira biflexa serovar Patoc (strain Patoc 1 / Ames) GN=tuf PE=3 SV=1) HSP 1 Score: 136.346 bits (342), Expect = 2.047e-31 Identity = 90/260 (34.62%), Postives = 130/260 (50.00%), Query Frame = 1 Query: 31 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPISGFEGDNMIERSTNLDWYKGPTLLDALDN-INEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLK 807 + K H+NI IGHVD GK+T T + L K NK + Y + D E+ RGITI + ++ET + +D PGH D++KNMITG +Q D A+L++ +T G QT+EH LLA +GV ++ NK D + + +E+ L K + +K PF ISG + ++L L++A+D + P R DKP +P++DV+ I G GTV GRVE GVLK Sbjct: 8 RSKPHLNIGTIGHVDHGKTTLTAAITTTLA-----------KLVGGKNK-AIAYDQI-DNAPEEKARGITIATSHQEYETPNRHYAHVDCPGHADYVKNMITGAAQMDAAILVVSATDGAMP-------QTKEHILLARQVGVPYIVVYLNKADMLAADERDDMVEMVKEEIKDLLNKYNFPGDKTPF--ISGSALKALEGEDSDLGMKSILKLMEAVDTYVPNPTRIVDKPFLMPVEDVFSITGRGTVATGRVEQGVLK 245
BLAST of FC928901 vs. ExPASy Swiss-Prot
Match: EFTU_KINRD (Elongation factor Tu OS=Kineococcus radiotolerans (strain ATCC BAA-149 / DSM 14245 / SRS30216) GN=tuf PE=3 SV=1) HSP 1 Score: 136.346 bits (342), Expect = 2.047e-31 Identity = 95/263 (36.12%), Postives = 138/263 (52.47%), Query Frame = 1 Query: 31 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPIS---GFEGDNMIERSTNLDW-YKGPTLLDALDN-INEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVL 804 + K H+NI IGH+D GK+T T I + + ++F E+NK S +DK ER+RGITI IA +++T + +D PGH D+IKNMITG +Q D A+L++ +T G QT+EH +LA +GV ++ NK D + + + EV L + + VP V +S EGD +W K L+DA+D I EP+R D+P +P++DV+ I G GTV GR+E GVL Sbjct: 8 RTKPHVNIGTIGHIDHGKTTLTA-------AITRVLHDKFP----ELNKASAFDQ--IDKAPEERQRGITISIAHVEYQTEARHYAHVDCPGHADYIKNMITGAAQMDGAILVVAATDGPMP-------QTKEHVILARQVGVPYIVVALNKADMVE---DEELLELVEMEVRELLSSYEFPGDDVPVVRVSALKALEGD--------AEWGDKLMELMDAVDTAIPEPERAIDQPFLMPIEDVFTITGRGTVVTGRIERGVL 239
BLAST of FC928901 vs. ExPASy Swiss-Prot
Match: EFTU_BORAP (Elongation factor Tu OS=Borrelia afzelii (strain PKo) GN=tuf PE=3 SV=1) HSP 1 Score: 136.346 bits (342), Expect = 2.047e-31 Identity = 89/268 (33.21%), Postives = 140/268 (52.24%), Query Frame = 1 Query: 22 IMGKEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPISGFEGDNMIERSTNLDWYKGPTLLDALDN-INEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVV 822 + + K H+N+ IGHVD GK+T T + ++K + ++ KY + D E+ RGITI+ ++ET + +D PGH D+IKNMITG +Q D A+L++ + +G + QT+EH LLA +G+K++I NK+D P+ + + EV ++K G++ P + S F + E K LL+++DN + P+R DKP L ++DV+ I G GTV GR+E GV+K G V Sbjct: 5 VFQRTKPHMNVGTIGHVDHGKTTLTAAISIYCSKLNK-------------DAKALKYEDI-DNAPEEKARGITINARHIEYETANRHYAHVDCPGHADYIKNMITGAAQMDAAILLVAADSGA-------EPQTKEHLLLAQRMGIKKIIVFLNKLDLADPEL----VELVEVEVLELVEKYGFS-ANTPIIKGSAFGAMSNPEDPEATKCVK--ELLESMDNYFDLPERDIDKPFLLAVEDVFSISGRGTVATGRIERGVIKVGQEV 244
BLAST of FC928901 vs. ExPASy Swiss-Prot
Match: EFTU_BACWK (Elongation factor Tu OS=Bacillus weihenstephanensis (strain KBAB4) GN=tuf PE=3 SV=1) HSP 1 Score: 136.346 bits (342), Expect = 2.047e-31 Identity = 90/275 (32.73%), Postives = 134/275 (48.73%), Query Frame = 1 Query: 31 KEKTHINIVVIGHVDSGKSTTTGHL---IYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPISGFEG--------DNMIERSTNLDWYKGPTLLDALDNINEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVV 822 + K H+NI IGHVD GK+T T + + K GG + R ++ +D ERERGITI A ++ET + +D PGH D++KNMITG +Q D +L++ + G QTREH LL+ +GV ++ NK D + + + EV L + G+ + +P + S + + +IE T +D Y I P+R +DKP +P++DV+ I G GTV GRVE G++K G VV Sbjct: 8 RSKPHVNIGTIGHVDHGKTTLTAAITTVLAKAGGAEARGYDQ------------------IDAAPEERERGITISTAHVEYETETRHYAHVDCPGHADYVKNMITGAAQMDGGILVVSAADGPMP-------QTREHILLSRQVGVPYIVVFLNKCDMVD---DEELLELVEMEVRDLLSEYGFPGDDIPVIKGSALKALQGEAEWEEKIIELMTEVDAY-----------IPTPERETDKPFLMPIEDVFSITGRGTVATGRVERGIVKVGDVV 243
BLAST of FC928901 vs. ExPASy Swiss-Prot
Match: EFTU2_THET8 (Elongation factor Tu-B OS=Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579) GN=tufB PE=1 SV=2) HSP 1 Score: 136.346 bits (342), Expect = 2.047e-31 Identity = 95/268 (35.45%), Postives = 133/268 (49.63%), Query Frame = 1 Query: 31 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPISGFEGDNMIERSTNL-----DWY-KGPTLLDALDN-INEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPG 813 + K H+N+ IGHVD GK+T T L + AAE K +DK ER RGITI+ A ++ET K + + +D PGH D+IKNMITG +Q D A+L++ + G QTREH LLA +GV ++ NK+D D + EV L + + ++VP + S + R+ +W K LLDA+D I P R DKP +P++DV+ I G GTV GR+E G +K G Sbjct: 8 RTKPHVNVGTIGHVDHGKTTLTAALTFVT--------------AAENPNVEVKDYGDIDKAPEERARGITINTAHVEYETAKRHYSHVDCPGHADYIKNMITGAAQMDGAILVVSAADGPMP-------QTREHILLARQVGVPYIVVFMNKVDMVD---DPELLDLVEMEVRDLLNQYEFPGDEVPVIRGSALLALEQMHRNPKTRRGENEWVDKIWELLDAIDEYIPTPVRDVDKPFLMPVEDVFTITGRGTVATGRIERGKVKVG 251
BLAST of FC928901 vs. ExPASy Swiss-Prot
Match: EFTU_SYNPW (Elongation factor Tu OS=Synechococcus sp. (strain WH7803) GN=tuf PE=3 SV=1) HSP 1 Score: 135.961 bits (341), Expect = 2.673e-31 Identity = 87/263 (33.08%), Postives = 132/263 (50.19%), Query Frame = 1 Query: 31 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPISGFEG-DNMIERSTNLDWYKGPTLLDALD-NINEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPG 813 + K H+NI IGHVD GK+T T + L + ++ + +D ERERGITI+ A ++ET + +D PGH D++KNMITG +Q D A+L+ +T G QT+EH LLA +GV ++ NK D + + + E+ L + + +P V +SG + + E +D L+ A+D NI EP+R DKP + ++DV+ I G GTV GR+E G++K G Sbjct: 8 RNKPHVNIGTIGHVDHGKTTLTAAITNVLAKKGQAKVQDYAD---------------IDGAPEERERGITINTAHVEYETDTRHYAHVDCPGHADYVKNMITGAAQMDGAILVCAATDGPM-------AQTKEHILLAKQVGVPALVVALNKCDMVD---DEEIIELVEMEIRELLSSYDFPGDDIPVVQVSGLKAIEGEAEWEAKID-----ELMQAVDANIPEPEREVDKPFLMAIEDVFSITGRGTVATGRIERGIVKVG 240 The following BLAST results are available for this feature:
BLAST of FC928901 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC928901 ID=FC928901; Name=FC928901; organism=Citrus clementina; type=EST; length=854bpback to top |