FC928915

Overview
NameFC928915
Unique NameFC928915
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length690
Libraries
Library NameType
PhII-IIIV1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC928915 vs. ExPASy Swiss-Prot
Match: AQPZ_ECOL6 (Aquaporin Z OS=Escherichia coli O6 GN=aqpZ PE=3 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 7.690e-17
Identity = 55/169 (32.54%), Postives = 80/169 (47.34%), Query Frame = 1
Query:  211 GVGILGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAISGVGLVKAFQKSYYTRYGGGANELAD---------GYSTGVGLAAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPPRSLGAA 690
            G+G  G+A AFG  +  + +    ISGGH NPAVT GL+   +      V Y++AQ +G I    L+     S  T +   A+  A          GYS    L  E++ +   +  +  ATD    A        AP+ IG A+ ++HL +IP+T T +NP RS   A
Sbjct:   33 GIGFAGVALAFGLTVLTMAFAVGHISGGHFNPAVTIGLWAGGRFPAKEVVGYVIAQVVGGIVAAALLYLI-ASGKTGFDAAASGFASNGYGEHSPGGYSMLSALVVELVLSAGFLLVIHGATDKFAPAG------FAPIAIGLALTLIHLISIPVTNTSVNPARSTAVA 194          
BLAST of FC928915 vs. ExPASy Swiss-Prot
Match: AQPZ_ECO57 (Aquaporin Z OS=Escherichia coli O157:H7 GN=aqpZ PE=3 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 7.690e-17
Identity = 55/169 (32.54%), Postives = 80/169 (47.34%), Query Frame = 1
Query:  211 GVGILGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAISGVGLVKAFQKSYYTRYGGGANELAD---------GYSTGVGLAAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPPRSLGAA 690
            G+G  G+A AFG  +  + +    ISGGH NPAVT GL+   +      V Y++AQ +G I    L+     S  T +   A+  A          GYS    L  E++ +   +  +  ATD    A        AP+ IG A+ ++HL +IP+T T +NP RS   A
Sbjct:   33 GIGFAGVALAFGLTVLTMAFAVGHISGGHFNPAVTIGLWAGGRFPAKEVVGYVIAQVVGGIVAAALLYLI-ASGKTGFDAAASGFASNGYGEHSPGGYSMLSALVVELVLSAGFLLVIHGATDKFAPAG------FAPIAIGLALTLIHLISIPVTNTSVNPARSTAVA 194          
BLAST of FC928915 vs. ExPASy Swiss-Prot
Match: TIP11_MAIZE (Aquaporin TIP1-1 OS=Zea mays GN=TIP1-1 PE=2 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 1.004e-16
Identity = 60/159 (37.74%), Postives = 81/159 (50.94%), Query Frame = 1
Query:  217 GILGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAISGVGLVKAFQKSYYTRYGGGANELADGYSTGVGLAAEIIGTFVLVYTVF-SATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPPRSLGAA 690
            G++  A A    +FV V   A ISGGH+NPAVTFG F+   ++L R ++Y VAQ LG+     L++       T   G       G S    L  EI+ TF LVYTV+ +A DPK+ +    +  +AP+ IGF V    L      G  +NP  S G A
Sbjct:   57 GLIAAAVAHAFALFVAVSVGANISGGHVNPAVTFGAFVGGNITLFRGLLYWVAQLLGSTVACFLLRFSTGGQATGTFG-----LTGVSVWEALVLEIVMTFGLVYTVYATAVDPKKGS----LGTIAPIAIGFIVGANILVGGAFDGASMNPAVSFGPA 206          
BLAST of FC928915 vs. ExPASy Swiss-Prot
Match: TIP41_ARATH (Aquaporin TIP4-1 OS=Arabidopsis thaliana GN=TIP4-1 PE=2 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 1.713e-16
Identity = 74/209 (35.41%), Postives = 103/209 (49.28%), Query Frame = 1
Query:   73 ELTKWSFYRALIAEFIAXXXXXXXXXXXXIGYKSQTDPAKNVDGCAGVGILGIAWAFGGMIFVLVYCTAG-ISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAISGVGLVKAFQKSYYT-RYGGGANELADGYSTGVGLAAEIIGTFVLVYTVFSA-TDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPPRSLGAA 690
            E  K    +ALI EFI             +G    TD   ++ G   VG+  +A A   ++ V++  +AG ISGGH+NPAVT GL L   +S+ RA +Y + Q L + +       F  SY T   G   + LA G S   G+  EII TF L++TV++   DPK+ + D   P+L     GF V    LA    +G  +NP RS G A
Sbjct:   11 EAAKPDCIKALIVEFITTFLFVFAG----VGSAMATD---SLVGNTLVGLFAVAVAHAFVVAVMI--SAGHISGGHLNPAVTLGLLLGGHISVFRAFLYWIDQLLASSAA-----CFLLSYLTGGMGTPVHTLASGVSYTQGIIWEIILTFSLLFTVYATIVDPKKGSLDGFGPLLT----GFVVGANILAGGAFSGASMNPARSFGPA 201          
BLAST of FC928915 vs. ExPASy Swiss-Prot
Match: TIPA_PHAVU (Probable aquaporin TIP-type alpha OS=Phaseolus vulgaris PE=1 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 1.450e-15
Identity = 53/156 (33.97%), Postives = 81/156 (51.92%), Query Frame = 1
Query:  220 ILGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAISGVGLVKAFQKSYYTRYGGGANELADGYSTGVGLAAEIIGTFVLVYTVF-SATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPPRSLG 684
            +L +A A    +F  V  +  +SGGH+NPAV+FG  +  ++S++RAV Y +AQ LG+I    +++    +           ++ G   G     E++ TF L+YTV+ +A DPKR A    V  +APL IG  V    L   P  G  +NP  + G
Sbjct:   58 LLALALAHAFALFAAVSASMHVSGGHVNPAVSFGALIGGRISVIRAVYYWIAQLLGSIVAALVLRLVTNNMRP----SGFHVSPGVGVGHMFILEVVMTFGLMYTVYGTAIDPKRGA----VSYIAPLAIGLIVGANILVGGPFDGACMNPALAFG 205          
BLAST of FC928915 vs. ExPASy Swiss-Prot
Match: TIP32_ORYSJ (Probable aquaporin TIP3-2 OS=Oryza sativa subsp. japonica GN=TIP3-2 PE=2 SV=2)

HSP 1 Score: 83.1889 bits (204), Expect = 1.450e-15
Identity = 67/205 (32.68%), Postives = 95/205 (46.34%), Query Frame = 1
Query:   97 RALIAEFIAXXXXXXXXXXXXIG-YKSQTDPAKNVDGCAGVGILGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAISGVGLVKAFQKSYYTRYGGGANELADGYSTG------VGLAAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPPRSLGAA 690
            RA ++EF+A             G +K   D      G  G G+L +A A    +   V  +   SGGH+NPAVTFG+ + R++S  RA +Y  AQ LGA+  V L++           GG   +  G++ G        L  E++ TF LVYTV++    +RS        +APL IG       LA  P  G  +NP R+ G A
Sbjct:   29 RAALSEFVATAVFVFAAEGSVYGLWKMYRDT-----GTLG-GLLVVAVAHALALAAAVAVSRNASGGHVNPAVTFGVLVGRRISFARAALYWAAQLLGAVLAVLLLRL--------ASGGMRPM--GFTLGHRIHERHALLLEVVMTFGLVYTVYATAVDRRSGGGD----IAPLAIGLVAGANILAGGPFDGAAMNPARAFGPA 213          
BLAST of FC928915 vs. ExPASy Swiss-Prot
Match: AQP6_HUMAN (Aquaporin-6 OS=Homo sapiens GN=AQP6 PE=2 SV=2)

HSP 1 Score: 79.337 bits (194), Expect = 2.094e-14
Identity = 55/157 (35.03%), Postives = 77/157 (49.04%), Query Frame = 1
Query:  220 ILGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAISGVGLVKAFQKSYYTRYGGGANELADGYSTGVGLAAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPPRSLGAA 690
            +L IA  F  +  + V  T   SG H NPAVT    +   +SL RAV Y+ AQ +GA  G  L+         R   G N + +  STG  +A E++ T  LV  VF++TD ++++            IG +V + HL  I  TG  +NP RS G A
Sbjct:   55 VLQIAITFNLVTAMAVQVTWKASGAHANPAVTLAFLVGSHISLPRAVAYVAAQLVGATVGAALLYGVMPG-DIRETLGINVVRNSVSTGQAVAVELLLTLQLVLCVFASTDSRQTSGS------PATMIGISVALGHLIGIHFTGCSMNPARSFGPA 204          
BLAST of FC928915 vs. ExPASy Swiss-Prot
Match: TIP51_ARATH (Probable aquaporin TIP5-1 OS=Arabidopsis thaliana GN=TIP5-1 PE=2 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 7.958e-14
Identity = 58/170 (34.12%), Postives = 90/170 (52.94%), Query Frame = 1
Query:  187 AKNVDGCAGVGILGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAISGVGLVKAFQKSYYTRYGGGANELADGYSTGVGLAA-EIIGTFVLVYTVFSATDPKRSARDSHVPV-LAPLPIGFAVFMVHLATIPITGTGINPPRSLGAA 690
            A +V G  GV I  IA A    +   VY +  +SGGH+NPAVTF + +A ++S+  A+ Y  +Q + ++    ++K      +      A E+     TG G +  E +  FVLVYTVF+A+DP+R      +P+ + P+ IGF      LA  P +G  +NP  + G+A
Sbjct:   51 AGDVSGPFGVLIPAIANALA--LSSSVYISWNVSGGHVNPAVTFAMAVAGRISVPTAMFYWTSQMIASVMACLVLKVTVMEQHVPIYKIAGEM-----TGFGASVLEGVLAFVLVYTVFTASDPRRG-----LPLAVGPIFIGFVAGANVLAAGPFSGGSMNPACAFGSA 208          
BLAST of FC928915 vs. ExPASy Swiss-Prot
Match: TIP44_MAIZE (Aquaporin TIP4-4 OS=Zea mays GN=TIP4-4 PE=2 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 1.039e-13
Identity = 63/199 (31.66%), Postives = 93/199 (46.73%), Query Frame = 1
Query:   97 RALIAEFIAXXXXXXXXXXXXIGYKSQTDPAKNVDGCAGVGILGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAISGVGLVKAFQKSYYTRYGGGANELADGYSTGVGLAAEIIGTFVLVYTVF-SATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPPRSLGAA 690
            RA++AE I             +G    T       G   VG+  +A A   ++ V+V     +SGGHINPAVT GL    +++L R+ +Y+ AQ LG+     L+ AF        G   + L  G     G+  E + TF L++ V+ +  DP+R+     V  + PL +G  V    LA  P +G  +NP RS G A
Sbjct:   19 RAVLAELILTFLFVFAG----VGSAMATGKLAGGGGDTVVGLTAVALAHTLVVAVMVSAGLHVSGGHINPAVTLGLAATGRITLFRSALYVAAQLLGSTLAC-LLLAFLA--VADSGVPVHALGAGVGALRGVLMEAVLTFSLLFAVYATVVDPRRA-----VGGMGPLLVGLVVGANVLAGGPFSGASMNPARSFGPA 205          
BLAST of FC928915 vs. ExPASy Swiss-Prot
Match: TIP42_ORYSJ (Probable aquaporin TIP4-2 OS=Oryza sativa subsp. japonica GN=TIP4-2 PE=2 SV=2)

HSP 1 Score: 76.6406 bits (187), Expect = 1.357e-13
Identity = 61/179 (34.08%), Postives = 85/179 (47.49%), Query Frame = 1
Query:  172 SQTDPAKNVDGCAGVGILGIAWAFGGMIFVLVYCTAG--ISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAISGVGLVKAFQKSYYTRYGGGA---NELADGYSTGVGLAAEIIGTFVLVYTVFSA-TDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPPRSLGAA 690
            + T  A    G AG      A A    + V V  TAG  +SGGH+NPAVT  L +   ++L R+ +Y+ AQ  G+     L++          GG A   + LADG     G+AAE + TF L+  + +   DP+R+A     P   PL  G  V    +A   +TG  +NP RS G A
Sbjct:   42 ASTITAGKAAGGAGEAAAVTAAAMAQALVVAVLATAGFHVSGGHLNPAVTLSLAVGGHITLFRSALYVAAQLAGSSLACLLLRCLT-------GGAATPVHALADGVGPVQGVAAEAVFTFTLLLVICATILDPRRAA----PPGTGPLLTGLLVGANTVAGGALTGASMNPARSFGPA 209          
The following BLAST results are available for this feature:
BLAST of FC928915 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 162
Match NameE-valueIdentityDescription
AQPZ_ECOL67.690e-1732.54Aquaporin Z OS=Escherichia coli O6 GN=aqpZ PE=3 SV... [more]
AQPZ_ECO577.690e-1732.54Aquaporin Z OS=Escherichia coli O157:H7 GN=aqpZ PE... [more]
TIP11_MAIZE1.004e-1637.74Aquaporin TIP1-1 OS=Zea mays GN=TIP1-1 PE=2 SV=1[more]
TIP41_ARATH1.713e-1635.41Aquaporin TIP4-1 OS=Arabidopsis thaliana GN=TIP4-1... [more]
TIPA_PHAVU1.450e-1533.97Probable aquaporin TIP-type alpha OS=Phaseolus vul... [more]
TIP32_ORYSJ1.450e-1532.68Probable aquaporin TIP3-2 OS=Oryza sativa subsp. j... [more]
AQP6_HUMAN2.094e-1435.03Aquaporin-6 OS=Homo sapiens GN=AQP6 PE=2 SV=2[more]
TIP51_ARATH7.958e-1434.12Probable aquaporin TIP5-1 OS=Arabidopsis thaliana ... [more]
TIP44_MAIZE1.039e-1331.66Aquaporin TIP4-4 OS=Zea mays GN=TIP4-4 PE=2 SV=1[more]
TIP42_ORYSJ1.357e-1334.08Probable aquaporin TIP4-2 OS=Oryza sativa subsp. j... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAH3BB02RM1 PhII-IIIV1 Citrus clementina cDNA clone KN0AAH3BB02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC928915 ID=FC928915; Name=FC928915; organism=Citrus clementina; type=EST; length=690bp
GGCACGAGGCACGGCTCATATTCAGCCAAGGACTACACGGACCCACCGCC
GGAGCCGCTATTCGACGCCGTGGAGCTGACCAAATGGTCATTCTACAGAG
CCTTGATAGCTGAGTTCATAGCAACCCTGCTCTTTCTTTACGTCACTGTC
TTGACTGTCATTGGCTACAAAAGCCAGACCGATCCCGCCAAGAACGTCGA
CGGCTGTGCCGGCGTCGGCATCCTCGGCATCGCCTGGGCCTTCGGTGGCA
TGATCTTTGTCCTCGTTTACTGCACCGCCGGTATCTCAGGTGGTCACATT
AACCCGGCAGTGACGTTCGGACTATTCTTGGCCCGCAAGGTGTCGTTGGT
CCGTGCTGTGATGTACATGGTGGCGCAGTGCCTTGGTGCTATCTCCGGTG
TTGGGTTGGTCAAGGCTTTCCAAAAATCTTACTACACAAGGTACGGAGGT
GGGGCCAACGAGCTGGCCGATGGGTACAGCACCGGCGTTGGATTGGCCGC
CGAGATCATCGGCACCTTTGTCTTGGTTTACACTGTCTTCTCGGCCACTG
ATCCCAAGAGAAGCGCCAGAGACTCCCACGTTCCCGTTTTGGCACCGCTC
CCCATTGGATTTGCTGTGTTCATGGTACACTTGGCCACAATCCCAATCAC
TGGCACTGGCATTAACCCACCAAGGAGTCTCGGGGCCGCT
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