FC928915

Overview
NameFC928915
Unique NameFC928915
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length690
Libraries
Library NameType
PhII-IIIV1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC928915 vs. ExPASy Swiss-Prot
Match: AQPB_DICDI (Aquaporin B OS=Dictyostelium discoideum GN=wacA PE=2 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 1.357e-13
Identity = 62/206 (30.10%), Postives = 95/206 (46.12%), Query Frame = 1
Query:   91 FYRALIAEFIAXXXXXXXXXXXXIGYK-SQTDPAKNVDGCAGVGILGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAISGVGLVKAFQKSYYTRYGGGANELADGYSTGVGLAAEIIGTFVLVY-----TVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPPRSLGAA 690
            F R L+AEF              +    + +DP   V  C    + G A+A       +++  +GISG  +NPAVT G     ++ ++  + +++ QC+GA+ G G++KA   ++Y R    A  LA G +   G   E++ T  LV+      V++  DPK S        +APL IG AV          TG  +NP RS G A
Sbjct:   30 FTRQLLAEFFGTLFVVYIVSGSTLAANFAVSDPIVRV--CLICLVQGFAFA------AIIWSISGISGCQLNPAVTVGCVTTGRMGILNGIAFIIFQCVGALVGAGMMKASLPTFYER-DLSATTLATGVNVARGFFLEMVTTSFLVFVVLGVAVYNEWDPKISR-------VAPLAIGCAVIAGVGFLNLFTGGSLNPARSFGPA 219          
BLAST of FC928915 vs. ExPASy Swiss-Prot
Match: NO26_SOYBN (Nodulin-26 OS=Glycine max PE=1 SV=2)

HSP 1 Score: 75.8702 bits (185), Expect = 2.315e-13
Identity = 52/158 (32.91%), Postives = 76/158 (48.10%), Query Frame = 1
Query:  226 GIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAISGVGLVKAFQKSYYTRYGGGANELADGYSTGVGLAA---EIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPPRSLGAA 690
            GIA  +G ++ VLVY    ISGGH NPAVT      R+  L++   Y+VAQ LG+I   G ++         + G  ++ +     G  L A   E I TF L++ +       R+     V   A + IG  + +  +   P+TG  +NP RSLG A
Sbjct:   72 GIAIVWGLVLTVLVYTVGHISGGHFNPAVTIAFASTRRFPLIQVPAYVVAQLLGSILASGTLRLL-------FMGNHDQFSGTVPNGTNLQAFVFEFIMTFFLMFVICGVATDNRA-----VGEFAGIAIGSTLLLNVIIGGPVTGASMNPARSLGPA 217          
BLAST of FC928915 vs. ExPASy Swiss-Prot
Match: PDUF_SALTY (Propanediol diffusion facilitator OS=Salmonella typhimurium GN=pduF PE=2 SV=2)

HSP 1 Score: 75.0998 bits (183), Expect = 3.950e-13
Identity = 56/176 (31.82%), Postives = 82/176 (46.59%), Query Frame = 1
Query:  208 AGVGILGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAISGVGLVKAFQKSYYTRYGGGAN---------ELADGYSTGVGLA--------AEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPPRSLG 684
            A +G+  I   +G  I + VY TAGISGGH+NPAVT  L+L       + + Y++AQ  GA  G  L      S +T +    +         +LA  +ST    A         E++ T +L+  + + TD            LAPL IG  V ++  +T P+TG  +NP R  G
Sbjct:   35 ASLGLWEICIIWGLGISLAVYLTAGISGGHLNPAVTIALWLFACFPKQKVLPYIIAQFAGAFGGALLAYVLYSSLFTEFETAHHMVRGSVESLQLASIFSTYPAAALNVWQAALVEVVITSILMGMIMALTDDGNGIPKG---PLAPLLIGILVAVIGASTGPLTGFAMNPARDFG 207          
BLAST of FC928915 vs. ExPASy Swiss-Prot
Match: AQPM_METTM (Aquaporin aqpM OS=Methanobacterium thermoautotrophicum (strain Marburg / DSM 2133) GN=aqpM PE=1 SV=3)

HSP 1 Score: 75.0998 bits (183), Expect = 3.950e-13
Identity = 55/166 (33.13%), Postives = 78/166 (46.99%), Query Frame = 1
Query:  211 GVGILG-------IAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAISGVGLVKAFQKSYYTRYGG-GANELADGYSTGVGLAAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPPRSLG 684
            G+G+LG       I  AFG  I   +Y    ISG HINPAVT GL+  +K      V Y++AQ LGA  G  +            GG GA     G S    + AE++GTF+L+ T+      +R+ +       A + IG  V  +      I+G+ +NP R+ G
Sbjct:   45 GIGLLGGLGDWVAIGLAFGFAIAASIYALGNISGCHINPAVTIGLWSVKKFPGREVVPYIIAQLLGAAFGSFIFLQCAGIGAATVGGLGATAPFPGISYWQAMLAEVVGTFLLMITIMGIAVDERAPKG-----FAGIIIGLTVAGIITTLGNISGSSLNPARTFG 205          
BLAST of FC928915 vs. ExPASy Swiss-Prot
Match: TIP43_ORYSJ (Probable aquaporin TIP4-3 OS=Oryza sativa subsp. japonica GN=TIP4-3 PE=2 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 5.158e-13
Identity = 54/164 (32.93%), Postives = 78/164 (47.56%), Query Frame = 1
Query:  214 VGILGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAISGVGLVKAFQKSYYTRYGGGANEL-----ADGYSTGVGLAAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPPRSLGAA 690
            +G+  +A A   ++ V+V     +SGGHINPAVT GL     ++L R+ +Y  AQ LG+     L+ A          GG   +     A G      +A E + TF L++ V++    +R A    V  L PL +G  V    LA  P +G  +NP RS G A
Sbjct:   53 MGLTAVAAAHALVVAVMVSAGLHVSGGHINPAVTLGLAAGGHITLFRSALYAAAQLLGSSLACLLLAALT--------GGEEAVPVHAPAPGVGAARAVAMEAVLTFSLLFAVYATVVDRRRA----VGALGPLLVGLVVGANILAGGPYSGASMNPARSFGPA 204          
BLAST of FC928915 vs. ExPASy Swiss-Prot
Match: TIP43_MAIZE (Aquaporin TIP4-3 OS=Zea mays GN=TIP4-3 PE=2 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 6.737e-13
Identity = 56/176 (31.82%), Postives = 86/176 (48.86%), Query Frame = 1
Query:  172 SQTDPAKNVDGCAGVGILGIAWAFGGMIFVLVYCTAG--ISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAISGVGLVKAFQKSYYTRYGGGANELADGYSTGVGLAAEIIGTFVLVYTVFSA-TDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPPRSLGAA 690
            + TD A      AG  +  +A   G  + V V  TAG  ISGGH+NPAVT  L +   V+L R+ +Y+ AQ L + +   L++       T      + LA+G     G+ AE + TF L++ +++   DP++      +P   PL  G  V    +A   ++G  +NP RS G A
Sbjct:   39 AMTDGATTKGSTAGGDLTAVA--LGQALVVAVIATAGFHISGGHVNPAVTLSLAVGGHVTLFRSSLYIAAQMLASSAACFLLRWLTGGLAT----PVHALAEGVGPLQGVVAEAVFTFSLLFVIYATILDPRKL-----LPGAGPLLTGLLVGANSVAGAALSGASMNPARSFGPA 203          
BLAST of FC928915 vs. ExPASy Swiss-Prot
Match: BIB_DROME (Neurogenic protein big brain OS=Drosophila melanogaster GN=bib PE=1 SV=2)

HSP 1 Score: 74.3294 bits (181), Expect = 6.737e-13
Identity = 70/234 (29.91%), Postives = 95/234 (40.60%), Query Frame = 1
Query:    1 GTRHGSYSAKDYTDPPPEPLFDAVELTKWSFYRALIAEFIAXXXXXXXXXXXXIGYKSQTDPAKNVDGCAGVGILGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAISGVGLVKAFQKSYYTRYGGGANELADGYSTGVGLAA------EIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPPRSLG 684
            G  HG  +    T   P+    A E+    F+R++I+E +A             G          V       +L  A A G  +  L  C   ISG HINPAVT  L + R +S +RA MY+ AQC G I+G  L+      Y     G    L    S    LAA      E I TF++V   F +TDP +    +     +   IG A       ++P     +NP RSLG
Sbjct:   35 GGGHGVNNRLSSTLQAPKRSMQA-EIRTLEFWRSIISECLASFMYVFIVCGAAAGV--------GVGASVSSVLLATALASGLAMATLTQCFLHISGAHINPAVTLALCVVRSISPIRAAMYITAQCGGGIAGAALL------YGVTVPGYQGNLQAAISHSAALAAWERFGVEFILTFLVVLCYFVSTDPMKKFMGN-----SAASIGCAYSACCFVSMPY----LNPARSLG 244          
BLAST of FC928915 vs. ExPASy Swiss-Prot
Match: AQPA_DICDI (Aquaporin A OS=Dictyostelium discoideum GN=aqpA PE=2 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 1.501e-12
Identity = 52/168 (30.95%), Postives = 83/168 (49.40%), Query Frame = 1
Query:  205 CAGVGILGIAWA---FGGMI-----FVLVYCTAGISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAISGVGLVKAFQKSYYTRYGGGANELADGYSTGVGLAAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPPRSLG 684
            CA   + G + A    GG+I       L++  +G+SG ++NPAVT    L+ +V L+ ++ Y+ AQ LG I+G G++     + Y R   G   LA G +TG     E++ T +L   V   +    +  D  +  +AP  IG A+F+        +G  +NP R LG
Sbjct:   56 CAAFAVAGDSAARALLGGLIQGMALAALIWAVSGVSGCNLNPAVTLANLLSGRVGLIDSLYYVAAQILGCIAGAGILYGCLPNMY-RIDLGVPHLAPGMNTGQAFLMEMMLTSILCLCVLGTS--VFNVWDRRLNRIAPFAIGLALFIGVAIGFNFSGGALNPVRVLG 220          
BLAST of FC928915 vs. ExPASy Swiss-Prot
Match: TIP41_MAIZE (Aquaporin TIP4-1 OS=Zea mays GN=TIP4-1 PE=2 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 2.560e-12
Identity = 64/213 (30.05%), Postives = 95/213 (44.60%), Query Frame = 1
Query:   61 FDAVELTKWSFYRALIAEFIAXXXXXXXXXXXXIGYKSQTDPAKNVDGCAGVGILGIAWAFGGMIFVLVYCTAG--ISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAISGVGLVKAFQKSYYTRYGGGANELADGYSTGVGLAAEIIGTFVLVYTVFS-ATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPPRSLGAA 690
            F+  E+      RA++AE +             +   S   P   +   A +  + IA A    + V    TAG  +SGGH+NPAVT GL +   ++ +RAV+Y+ AQ L + +   L++       T      + L  G S   GL  E+I TF L++  ++   DP+     S V  + PL  G  V    LA    TG  +NP RS G A
Sbjct:   12 FEHDEIPDVGCVRAVLAELVLTFLFVFTGVSAAMAAGSDGKPGDAMP-MATLAAVAIAHALAAGVLV----TAGFHVSGGHLNPAVTVGLMVRGHITKLRAVLYVAAQLLASSAACVLLRFLSGGMVT----PVHALGRGISPMQGLVMEVILTFSLLFVTYAMILDPR-----SQVRAIGPLLTGLIVGANSLAGGNFTGASMNPARSFGPA 210          
BLAST of FC928915 vs. ExPASy Swiss-Prot
Match: GLPF_HAEIN (Glycerol uptake facilitator protein OS=Haemophilus influenzae GN=glpF PE=3 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 3.343e-12
Identity = 53/175 (30.29%), Postives = 79/175 (45.14%), Query Frame = 1
Query:  211 GVGILGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAISGVGLVKAFQKSYYTRYGGGAN---------ELADGYST--------GVGLAAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPPRSLG 684
            G+  + I W  G  + + VY TAG+SG H+NPAVT  L+        + + Y+++Q LGA     LV A  ++ +  Y    N          LA  +ST        G   A E + T +L+  + + TD            LAPL IG  + ++  A  P+TG  +NP R  G
Sbjct:   38 GLWEISIMWGMG--VALAVYATAGLSGAHLNPAVTIALWKFACFDGKKVIPYIISQMLGAFFAAALVYALYRNVFIDYETVHNIVRGTQESLSLAGTFSTYPHPSLSIGGAFAVEFVITAILMALIMALTDDGNGVPRG---PLAPLLIGILIAVIGGAMGPLTGFAMNPARDFG 207          
The following BLAST results are available for this feature:
BLAST of FC928915 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 162
Match NameE-valueIdentityDescription
AQPB_DICDI1.357e-1330.10Aquaporin B OS=Dictyostelium discoideum GN=wacA PE... [more]
NO26_SOYBN2.315e-1332.91Nodulin-26 OS=Glycine max PE=1 SV=2[more]
PDUF_SALTY3.950e-1331.82Propanediol diffusion facilitator OS=Salmonella ty... [more]
AQPM_METTM3.950e-1333.13Aquaporin aqpM OS=Methanobacterium thermoautotroph... [more]
TIP43_ORYSJ5.158e-1332.93Probable aquaporin TIP4-3 OS=Oryza sativa subsp. j... [more]
TIP43_MAIZE6.737e-1331.82Aquaporin TIP4-3 OS=Zea mays GN=TIP4-3 PE=2 SV=1[more]
BIB_DROME6.737e-1329.91Neurogenic protein big brain OS=Drosophila melanog... [more]
AQPA_DICDI1.501e-1230.95Aquaporin A OS=Dictyostelium discoideum GN=aqpA PE... [more]
TIP41_MAIZE2.560e-1230.05Aquaporin TIP4-1 OS=Zea mays GN=TIP4-1 PE=2 SV=1[more]
GLPF_HAEIN3.343e-1230.29Glycerol uptake facilitator protein OS=Haemophilus... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAH3BB02RM1 PhII-IIIV1 Citrus clementina cDNA clone KN0AAH3BB02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC928915 ID=FC928915; Name=FC928915; organism=Citrus clementina; type=EST; length=690bp
GGCACGAGGCACGGCTCATATTCAGCCAAGGACTACACGGACCCACCGCC
GGAGCCGCTATTCGACGCCGTGGAGCTGACCAAATGGTCATTCTACAGAG
CCTTGATAGCTGAGTTCATAGCAACCCTGCTCTTTCTTTACGTCACTGTC
TTGACTGTCATTGGCTACAAAAGCCAGACCGATCCCGCCAAGAACGTCGA
CGGCTGTGCCGGCGTCGGCATCCTCGGCATCGCCTGGGCCTTCGGTGGCA
TGATCTTTGTCCTCGTTTACTGCACCGCCGGTATCTCAGGTGGTCACATT
AACCCGGCAGTGACGTTCGGACTATTCTTGGCCCGCAAGGTGTCGTTGGT
CCGTGCTGTGATGTACATGGTGGCGCAGTGCCTTGGTGCTATCTCCGGTG
TTGGGTTGGTCAAGGCTTTCCAAAAATCTTACTACACAAGGTACGGAGGT
GGGGCCAACGAGCTGGCCGATGGGTACAGCACCGGCGTTGGATTGGCCGC
CGAGATCATCGGCACCTTTGTCTTGGTTTACACTGTCTTCTCGGCCACTG
ATCCCAAGAGAAGCGCCAGAGACTCCCACGTTCCCGTTTTGGCACCGCTC
CCCATTGGATTTGCTGTGTTCATGGTACACTTGGCCACAATCCCAATCAC
TGGCACTGGCATTAACCCACCAAGGAGTCTCGGGGCCGCT
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