FC928915

Overview
NameFC928915
Unique NameFC928915
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length690
Libraries
Library NameType
PhII-IIIV1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC928915 vs. ExPASy Swiss-Prot
Match: AQP6_MOUSE (Aquaporin-6 OS=Mus musculus GN=Aqp6 PE=2 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 3.343e-12
Identity = 54/162 (33.33%), Postives = 75/162 (46.30%), Query Frame = 1
Query:  220 ILGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAISGVGLVKAFQKSYYTRYGG-----GANELADGYSTGVGLAAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPPRSLGAA 690
            +L IA  F       V  +   SG H NPAVT    +   +SL RA+ Y+ AQ  GA +G  L+      Y    GG     G N + +  STG  +A E++ T  LV  VF++ D +++             IG +V + HL  I  TG  +NP RS G A
Sbjct:   52 VLQIAITFNLATATAVQISWKTSGAHANPAVTLAYLVGSHISLPRAMAYIAAQLAGATAGAALL------YGVTPGGIRETLGVNVVHNSTSTGQAVAVELVLTLQLVLCVFASMDGRQTLAS------PAAMIGTSVALGHLIGIYFTGCSMNPARSFGPA 201          
BLAST of FC928915 vs. ExPASy Swiss-Prot
Match: AQP6_RAT (Aquaporin-6 OS=Rattus norvegicus GN=Aqp6 PE=1 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 4.367e-12
Identity = 54/162 (33.33%), Postives = 74/162 (45.68%), Query Frame = 1
Query:  220 ILGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAISGVGLVKAFQKSYYTRYGG-----GANELADGYSTGVGLAAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPPRSLGAA 690
            +L +A  F       V  +   SG H NPAVT    +   +SL RAV Y+ AQ  GA  G  L+      Y    GG     G N + +  STG  +A E++ T  LV  VF++ D +++             IG +V + HL  I  TG  +NP RS G A
Sbjct:   52 VLQVAITFNLATATAVQISWKTSGAHANPAVTLAYLVGSHISLPRAVAYIAAQLAGATVGAALL------YGVTPGGVRETLGVNVVHNSTSTGQAVAVELVLTLQLVLCVFASMDSRQTLGS------PAAMIGTSVALGHLIGIYFTGCSMNPARSFGPA 201          
BLAST of FC928915 vs. ExPASy Swiss-Prot
Match: AQP8_HUMAN (Aquaporin-8 OS=Homo sapiens GN=AQP8 PE=2 SV=2)

HSP 1 Score: 71.2478 bits (173), Expect = 5.703e-12
Identity = 54/168 (32.14%), Postives = 80/168 (47.62%), Query Frame = 1
Query:  196 VDGCAGVGILGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAISGVGLVKAF--QKSYYTRYGGGANELADGYSTGVGLAAEIIGTFVLVYTV-FSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPPRSLGAA 690
            ++     G+L  A A G  + +++     ISGGH NPAV+    L   ++LV  + Y V+Q LG + G  L KA   ++ ++   G     + +       L AEII T +L   V   A + K          LAP  IGFAV +  LA  P++G  +NP R+ G A
Sbjct:   57 IENGTDTGLLQPALAHGLALGLVIATLGNISGGHFNPAVSLAAMLIGGLNLVMLLPYWVSQLLGGMLGAALAKAVSPEERFWNASGAAFVTVQEQGQVAGALVAEIILTTLLALAVCMGAINEKTKG------PLAPFSIGFAVTVDILAGGPVSGGCMNPARAFGPA 218          
BLAST of FC928915 vs. ExPASy Swiss-Prot
Match: AQPM_METTH (Aquaporin aqpM OS=Methanobacterium thermoautotrophicum GN=aqpM PE=3 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 7.448e-12
Identity = 54/166 (32.53%), Postives = 78/166 (46.99%), Query Frame = 1
Query:  211 GVGILG-------IAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLG-AISGVGLVKAFQKSYYTRYGGGANELADGYSTGVGLAAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPPRSLG 684
            G+G+LG       I  AFG  I   +Y    ISG HINPAVT GL+  +K      V Y++AQ LG A +    ++    +  T  G GA     G      + AE +GTF+L+ T+      +R+ +       A + IG  V  +      ITG+ +NP R+ G
Sbjct:   45 GIGLLGGLGDWVAIGLAFGFAIAASIYALGNISGCHINPAVTIGLWSVKKFPGRDVVPYIIAQLLGAAFASFIFLQCAGITAATIGGLGATAPFPGIGYWQAMLAETVGTFLLMITIMGIAVDERAPKG-----FAGIIIGLTVAGIITTIGNITGSSLNPARTFG 205          
BLAST of FC928915 vs. ExPASy Swiss-Prot
Match: YFF4_YEAST (Uncharacterized membrane protein YFL054C OS=Saccharomyces cerevisiae GN=YFL054C PE=1 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 1.271e-11
Identity = 58/171 (33.92%), Postives = 77/171 (45.03%), Query Frame = 1
Query:  223 LGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAISGVGLVKAFQKSYYTRYGGGANELADGYSTGVGLAA--------------EIIGTFVLVYTVFSATDPKRSARDSHVPV---LAPLPIGFAVFMVHLATIPITGTGINPPRSLG 684
            L  AW FG M+ V  Y   GISGGHINPAVT  + + RK    +  +Y+VAQ +GA  G  +   +  S  T + GG +      +TG  L                E IG  +LV  + +  D      DS+ P    +  L IGF V  + +A    T   INP R LG
Sbjct:  384 LSFAWGFGCMLGV--YVAGGISGGHINPAVTISMAIFRKFPWKKVPVYIVAQIIGAYFGGAMAYGYFWSSITEFEGGPHIRTT--ATGACLFTDPKSYVTWRNAFFDEFIGASILVGCLMALLD------DSNAPPGNGMTALIIGFLVAAIGMALGYQTSFTINPARDLG 544          
BLAST of FC928915 vs. ExPASy Swiss-Prot
Match: AQPM_ARCFU (Probable aquaporin aqpM OS=Archaeoglobus fulgidus GN=aqpM PE=3 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 1.271e-11
Identity = 56/166 (33.73%), Postives = 73/166 (43.98%), Query Frame = 1
Query:  211 GVGILG-------IAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAISGVGLVKAFQKSYYTRYGG-GANELADGYSTGVGLAAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPPRSLG 684
            G+G LG       I  AF   I  ++Y    ISG HINPAVT  L+   +      V Y+VAQ +GA  G  L  A         GG GA     G   G  +  E IGTF+L+  +      +R+      P  A L IG  V  +      ITG+ +NP R+ G
Sbjct:   46 GIGALGGLGDWFAIGMAFALAIAAVIYSLGRISGAHINPAVTIALWSIGRFPGREVVPYIVAQFIGAALGSLLFLACVGPAAATVGGLGATAPFPGIGYGQAILTEAIGTFLLMLVIMGVAVDERAP-----PGFAGLVIGLTVGGIITTIGNITGSSLNPARTFG 206          
BLAST of FC928915 vs. ExPASy Swiss-Prot
Match: NIP11_ORYSJ (Aquaporin NIP1-1 OS=Oryza sativa subsp. japonica GN=NIP1-1 PE=2 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 1.659e-11
Identity = 48/155 (30.97%), Postives = 69/155 (44.52%), Query Frame = 1
Query:  226 GIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAISGVGLVKAFQKSYYTRYGGGANELADGYSTGVGLAAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPPRSLGAA 690
            G+A  +G  + V+VY    ISG H NPAVT      R+    +   Y  AQ LGA    G ++      +  + G     +D  S    L  E I TF L++ +       R+     +  LA L +G  + +  L   PI+G  +NP RSLG A
Sbjct:   82 GVAIVWGLAVMVMVYAVGHISGAHFNPAVTLAFATCRRFPWRQVPAYAAAQMLGATLAAGTLRLMFGGRHEHFPGTLPAGSDVQS----LVLEFIITFYLMFVISGVATDNRA-----IGELAGLAVGATILLNVLIAGPISGASMNPARSLGPA 227          
BLAST of FC928915 vs. ExPASy Swiss-Prot
Match: TIP51_ORYSJ (Probable aquaporin TIP5-1 OS=Oryza sativa subsp. japonica GN=TIP5;1 PE=2 SV=3)

HSP 1 Score: 69.3218 bits (168), Expect = 2.167e-11
Identity = 63/205 (30.73%), Postives = 92/205 (44.88%), Query Frame = 1
Query:   97 RALIAEFIAXXXXXXXXXXXXIGYKSQTDPAKNVDGCAGVGILGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLG---AISGVGLVKAFQKSYYTRYGGGANELADGYSTGVGLAAEIIGTFVLVYTVFSATDPKRSA----RDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPPRSLGAA 690
            RA  AEF +            I  +  T P +  D  + +    +A AFG  +F  V+  A +SGGH+NPAVTF   +   +++  A+ Y  +Q LG   A   +  + A Q    TR    A E+  G+  G+    E + TF++VYTV  A DP+       +      L  L +G       LA   +TG  +NP RS G A
Sbjct:   18 RAYFAEFFSTFLFVFIAVGSTISARMLT-PDETSDA-SSLMATAVAQAFG--LFAAVFIAADVSGGHVNPAVTFAYAIGGHITVPSAIFYWASQMLGSTFACLVLHYISAGQAVPTTRI---AVEMT-GFGAGI---LEGVLTFMVVYTVHVAGDPRGGGFGGRKGPAATALGALVVGAVTGACVLAAGSLTGASMNPARSFGPA 211          
BLAST of FC928915 vs. ExPASy Swiss-Prot
Match: TIP51_MAIZE (Aquaporin TIP5-1 OS=Zea mays GN=TIP5-1 PE=2 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 3.697e-11
Identity = 63/208 (30.29%), Postives = 92/208 (44.23%), Query Frame = 1
Query:   97 RALIAEFIAXXXXXXXXXXXXIGYKSQTDPAKNVDGCAGVGIL-GIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLG---AISGVGLVKAFQKSYYTRYGGGANELADGYSTGVGLAAEIIGTFVLVYT--VFSATDPKR----SARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPPRSLGAA 690
            R+ +AEFI+            I  +  T P  +V   AG  +   +A AFG  +F  V   A +SGGH+NPAVTF   +  ++ +  A+ Y  +Q LG   A   + L  A ++   TR       +A   +   G   E + TF+LVYT  V    +P+       R+     L  L +G       LA   +TG  +NP RS G A
Sbjct:   20 RSYLAEFISTFLFVFTAVGSAISARMLTTP--DVTSSAGPLVATAVAQAFG--LFAAVLIAADVSGGHVNPAVTFAYAIGGRIGVPSAMFYWASQLLGATFACLSLNLFSAGEEVPTTR-------IAVAMTGFGGAVLEGVLTFLLVYTVHVVGEREPRSRGGDGKREFAATALGALAVGLTQGAFVLAAGALTGASMNPARSFGPA 216          
BLAST of FC928915 vs. ExPASy Swiss-Prot
Match: NIP42_ARATH (Probable aquaporin NIP4-2 OS=Arabidopsis thaliana GN=NIP4-2 PE=2 SV=2)

HSP 1 Score: 68.5514 bits (166), Expect = 3.697e-11
Identity = 46/156 (29.49%), Postives = 77/156 (49.36%), Query Frame = 1
Query:  226 GIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGA-ISGVGLVKAFQKSYYTRYGGGANELADGYSTGVGLAAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPPRSLGAA 690
            GI   +G ++ V++Y T  ISG H NPAVT    + R+    +  +Y+ AQ  G+ ++ + L   F  +    +G    +     S+G  L AEII +F+L++ +       R+  +     LA + +G  + +      PI+G  +NP RSLG A
Sbjct:   77 GICVTWGLIVMVMIYSTGHISGAHFNPAVTVTFAVFRRFPWYQVPLYIGAQLTGSLLASLTLRLMFNVTPKAFFGTTPTD-----SSGQALVAEIIISFLLMFVISGVATDSRATGE-----LAGIAVGMTIILNVFVAGPISGASMNPARSLGPA 222          
The following BLAST results are available for this feature:
BLAST of FC928915 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 162
Match NameE-valueIdentityDescription
AQP6_MOUSE3.343e-1233.33Aquaporin-6 OS=Mus musculus GN=Aqp6 PE=2 SV=1[more]
AQP6_RAT4.367e-1233.33Aquaporin-6 OS=Rattus norvegicus GN=Aqp6 PE=1 SV=1[more]
AQP8_HUMAN5.703e-1232.14Aquaporin-8 OS=Homo sapiens GN=AQP8 PE=2 SV=2[more]
AQPM_METTH7.448e-1232.53Aquaporin aqpM OS=Methanobacterium thermoautotroph... [more]
YFF4_YEAST1.271e-1133.92Uncharacterized membrane protein YFL054C OS=Saccha... [more]
AQPM_ARCFU1.271e-1133.73Probable aquaporin aqpM OS=Archaeoglobus fulgidus ... [more]
NIP11_ORYSJ1.659e-1130.97Aquaporin NIP1-1 OS=Oryza sativa subsp. japonica G... [more]
TIP51_ORYSJ2.167e-1130.73Probable aquaporin TIP5-1 OS=Oryza sativa subsp. j... [more]
TIP51_MAIZE3.697e-1130.29Aquaporin TIP5-1 OS=Zea mays GN=TIP5-1 PE=2 SV=1[more]
NIP42_ARATH3.697e-1129.49Probable aquaporin NIP4-2 OS=Arabidopsis thaliana ... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAH3BB02RM1 PhII-IIIV1 Citrus clementina cDNA clone KN0AAH3BB02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC928915 ID=FC928915; Name=FC928915; organism=Citrus clementina; type=EST; length=690bp
GGCACGAGGCACGGCTCATATTCAGCCAAGGACTACACGGACCCACCGCC
GGAGCCGCTATTCGACGCCGTGGAGCTGACCAAATGGTCATTCTACAGAG
CCTTGATAGCTGAGTTCATAGCAACCCTGCTCTTTCTTTACGTCACTGTC
TTGACTGTCATTGGCTACAAAAGCCAGACCGATCCCGCCAAGAACGTCGA
CGGCTGTGCCGGCGTCGGCATCCTCGGCATCGCCTGGGCCTTCGGTGGCA
TGATCTTTGTCCTCGTTTACTGCACCGCCGGTATCTCAGGTGGTCACATT
AACCCGGCAGTGACGTTCGGACTATTCTTGGCCCGCAAGGTGTCGTTGGT
CCGTGCTGTGATGTACATGGTGGCGCAGTGCCTTGGTGCTATCTCCGGTG
TTGGGTTGGTCAAGGCTTTCCAAAAATCTTACTACACAAGGTACGGAGGT
GGGGCCAACGAGCTGGCCGATGGGTACAGCACCGGCGTTGGATTGGCCGC
CGAGATCATCGGCACCTTTGTCTTGGTTTACACTGTCTTCTCGGCCACTG
ATCCCAAGAGAAGCGCCAGAGACTCCCACGTTCCCGTTTTGGCACCGCTC
CCCATTGGATTTGCTGTGTTCATGGTACACTTGGCCACAATCCCAATCAC
TGGCACTGGCATTAACCCACCAAGGAGTCTCGGGGCCGCT
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