FC928918
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC928918 vs. ExPASy Swiss-Prot
Match: RAB1B_MACFA (Ras-related protein Rab-1B OS=Macaca fascicularis GN=RAB1B PE=2 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 8.387e-16 Identity = 40/54 (74.07%), Postives = 45/54 (83.33%), Query Frame = 1 Query: 25 IVYDVTDQESFNNVKQWLNEIDRYASDNVNKLLVGNKCDLTANKVVSYETAKVY 186 +VYDVTD+ES+ NVKQWL EIDRYAS+NVNKLLVGNK DLT KVV TAK + Sbjct: 86 VVYDVTDRESYANVKQWLQEIDRYASENVNKLLVGNKSDLTTKKVVDNTTAKEF 139
BLAST of FC928918 vs. ExPASy Swiss-Prot
Match: RAB1C_HUMAN (Putative Ras-related protein Rab-1C OS=Homo sapiens GN=RAB1C PE=5 SV=2) HSP 1 Score: 83.9593 bits (206), Expect = 1.095e-15 Identity = 40/54 (74.07%), Postives = 45/54 (83.33%), Query Frame = 1 Query: 25 IVYDVTDQESFNNVKQWLNEIDRYASDNVNKLLVGNKCDLTANKVVSYETAKVY 186 +VYDVTDQES+ NVKQWL EIDR+AS+NVNKLLVGNK DLT KVV TAK + Sbjct: 86 VVYDVTDQESYANVKQWLQEIDRHASENVNKLLVGNKSDLTTKKVVDNTTAKEF 139
BLAST of FC928918 vs. ExPASy Swiss-Prot
Match: YPT1_NEUCR (GTP-binding protein ypt1 OS=Neurospora crassa GN=ypt-1 PE=3 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 1.431e-15 Identity = 38/54 (70.37%), Postives = 44/54 (81.48%), Query Frame = 1 Query: 25 IVYDVTDQESFNNVKQWLNEIDRYASDNVNKLLVGNKCDLTANKVVSYETAKVY 186 +VYDVTD +SFNNVKQWL EIDRYA++ VNKLLVGNK D+T KVV Y AK + Sbjct: 86 VVYDVTDMDSFNNVKQWLQEIDRYATEGVNKLLVGNKSDMTDKKVVEYTVAKEF 139
BLAST of FC928918 vs. ExPASy Swiss-Prot
Match: YPT1_SCHPO (GTP-binding protein ypt1 OS=Schizosaccharomyces pombe GN=ypt1 PE=1 SV=2) HSP 1 Score: 82.0333 bits (201), Expect = 4.162e-15 Identity = 38/54 (70.37%), Postives = 43/54 (79.63%), Query Frame = 1 Query: 25 IVYDVTDQESFNNVKQWLNEIDRYASDNVNKLLVGNKCDLTANKVVSYETAKVY 186 IVYDVTDQ+SFNNVKQWL EIDRYA + VN+LLVGNK D+ KVV Y AK + Sbjct: 86 IVYDVTDQDSFNNVKQWLQEIDRYAVEGVNRLLVGNKSDMVDKKVVEYSVAKEF 139
BLAST of FC928918 vs. ExPASy Swiss-Prot
Match: YPT1_YEAST (GTP-binding protein YPT1 OS=Saccharomyces cerevisiae GN=YPT1 PE=1 SV=2) HSP 1 Score: 80.8777 bits (198), Expect = 9.273e-15 Identity = 38/54 (70.37%), Postives = 42/54 (77.78%), Query Frame = 1 Query: 25 IVYDVTDQESFNNVKQWLNEIDRYASDNVNKLLVGNKCDLTANKVVSYETAKVY 186 IVYDVTDQESFN VK WL EIDRYA+ V KLLVGNKCDL +VV Y+ AK + Sbjct: 86 IVYDVTDQESFNGVKMWLQEIDRYATSTVLKLLVGNKCDLKDKRVVEYDVAKEF 139
BLAST of FC928918 vs. ExPASy Swiss-Prot
Match: RAB1A_DICDI (Ras-related protein Rab-1A OS=Dictyostelium discoideum GN=rab1A PE=2 SV=2) HSP 1 Score: 80.1073 bits (196), Expect = 1.582e-14 Identity = 36/54 (66.67%), Postives = 44/54 (81.48%), Query Frame = 1 Query: 25 IVYDVTDQESFNNVKQWLNEIDRYASDNVNKLLVGNKCDLTANKVVSYETAKVY 186 +VYDVTD+ +F NV+QWL EIDR+A +NVNKLLVGNK DL A KVV + TAK + Sbjct: 86 VVYDVTDKLTFENVRQWLQEIDRFACENVNKLLVGNKSDLVAKKVVDFNTAKAF 139
BLAST of FC928918 vs. ExPASy Swiss-Prot
Match: RAB1B_DICDI (Ras-related protein Rab-1B OS=Dictyostelium discoideum GN=rab1B PE=2 SV=2) HSP 1 Score: 78.1814 bits (191), Expect = 6.010e-14 Identity = 35/54 (64.81%), Postives = 41/54 (75.93%), Query Frame = 1 Query: 25 IVYDVTDQESFNNVKQWLNEIDRYASDNVNKLLVGNKCDLTANKVVSYETAKVY 186 +VYDVTD SFNNVKQW+ EI RYA D+V +LLVGNKCDL K+V TA+ Y Sbjct: 86 VVYDVTDHVSFNNVKQWMQEIQRYACDSVTRLLVGNKCDLIEKKIVDTSTAREY 139
BLAST of FC928918 vs. ExPASy Swiss-Prot
Match: RAB1D_DICDI (Ras-related protein Rab-1D OS=Dictyostelium discoideum GN=rab1D PE=1 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 7.850e-14 Identity = 41/67 (61.19%), Postives = 46/67 (68.66%), Query Frame = 1 Query: 25 IVYDVTDQESFNNVKQWLNEIDRYASDNVNKLLVGNKCDLTANKVVSYETAKVYLLLYTGIFFFYPS 225 +VYD TDQ+SF NVKQW+ EIDRYA +NVNKLLVGNK DL KVV AK + Y GI F S Sbjct: 88 LVYDCTDQDSFTNVKQWMGEIDRYACENVNKLLVGNKTDLVNEKVVDSNQAKSFAESY-GIPFIETS 153
BLAST of FC928918 vs. ExPASy Swiss-Prot
Match: RABD1_ARATH (Ras-related protein RABD1 OS=Arabidopsis thaliana GN=RABD1 PE=1 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 2.983e-13 Identity = 35/52 (67.31%), Postives = 44/52 (84.62%), Query Frame = 1 Query: 25 IVYDVTDQESFNNVKQWLNEIDRYASDNVNKLLVGNKCDLTANKVVSYETAK 180 IVYD T+ ESFNNVKQWL+EIDRYA+++V KLL+GNK D+ +KVVS ET + Sbjct: 86 IVYDCTEMESFNNVKQWLSEIDRYANESVCKLLIGNKNDMVESKVVSTETGR 137
BLAST of FC928918 vs. ExPASy Swiss-Prot
Match: RAB1C_DICDI (Ras-related protein Rab-1C OS=Dictyostelium discoideum GN=Rab1C PE=2 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 2.792e-11 Identity = 28/54 (51.85%), Postives = 43/54 (79.63%), Query Frame = 1 Query: 25 IVYDVTDQESFNNVKQWLNEIDRYASDNVNKLLVGNKCDLTANKVVSYETAKVY 186 IVYD+T +SFN++K+WL ++DR+AS +V KL+VGNKCDL + + V ++ AK + Sbjct: 111 IVYDITSMDSFNSIKRWLIDVDRFASPSVLKLIVGNKCDLNSKRAVDFKIAKKF 164 The following BLAST results are available for this feature:
BLAST of FC928918 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 32
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Sequences
The
following sequences are available for this feature:
EST sequence >FC928918 ID=FC928918; Name=FC928918; organism=Citrus clementina; type=EST; length=801bpback to top |