FC928931

Overview
NameFC928931
Unique NameFC928931
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length678
Libraries
Library NameType
PhII-IIIV1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig386 contig Ccv1_Contig386:23..700. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC928931 vs. ExPASy Swiss-Prot
Match: NIA_BEABA (Nitrate reductase [NADPH] OS=Beauveria bassiana GN=NIA PE=3 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 2.709e-11
Identity = 27/78 (34.62%), Postives = 52/78 (66.67%), Query Frame = 2
Query:   95 KVYTLAEVSGHNDRKDCWLIIEGKVYDVTKFLDDHPGGDEVLLSATGKDATDDFEDVGHSSSAKAMMDEFYVGDIDSS 328
            ++ +L E+  H    + W ++ G VY+ T +LD+HPGG   +++A  +DAT++F  + HS +AKAMM ++++G ++ +
Sbjct:  536 RIISLEELKAHEGEMEPWFVVNGHVYNGTPYLDNHPGGATSIINAAAQDATEEFMTI-HSENAKAMMPQYHIGTLNDA 612          
BLAST of FC928931 vs. ExPASy Swiss-Prot
Match: NB5R4_XENTR (Cytochrome b5 reductase 4 OS=Xenopus tropicalis GN=cyb5r4 PE=2 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 2.709e-11
Identity = 28/70 (40.00%), Postives = 47/70 (67.14%), Query Frame = 2
Query:  104 TLAEVSGHNDRKDCWLIIEGKVYDVTKFLDDHPGGDEVLLSATGKDATDDFEDVGHSSSAKAMMDEFYVG 313
            T  E++ HN ++DCW+ I G VY++T +++ HPGG+E L+ A G+D TD F+ V    + ++M+ E  +G
Sbjct:   58 TEEELAQHNKKEDCWICIRGMVYNITPYMEYHPGGEEELMKAAGRDGTDLFDQVHRWVNYESMLKECLIG 127          
BLAST of FC928931 vs. ExPASy Swiss-Prot
Match: NIA7_HORVU (Nitrate reductase [NAD(P)H] OS=Hordeum vulgare GN=NAR-7 PE=2 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 3.539e-11
Identity = 27/73 (36.99%), Postives = 48/73 (65.75%), Query Frame = 2
Query:  101 YTLAEVSGHNDRKDCWLIIEGKVYDVTKFLDDHPGGDEVLLSATGKDATDDFEDVGHSSSAKAMMDEFYVGDI 319
            +T++EV  H  +   W+++ G VYD T FL DHPGG + +L   G D T++F+ + HS+ A+ +++ + VG++
Sbjct:  518 FTMSEVRRHASKDSAWIVVHGHVYDCTAFLKDHPGGADSILINAGSDCTEEFDAI-HSAKARGLLEMYRVGEL 589          
BLAST of FC928931 vs. ExPASy Swiss-Prot
Match: NIA_NEUCR (Nitrate reductase [NADPH] OS=Neurospora crassa GN=nit-3 PE=1 SV=3)

HSP 1 Score: 68.1662 bits (165), Expect = 4.622e-11
Identity = 30/78 (38.46%), Postives = 50/78 (64.10%), Query Frame = 2
Query:   95 KVYTLAEVSGHNDRKDCWLIIEGKVYDVTKFLDDHPGGDEVLLSATGKDATDDFEDVGHSSSAKAMMDEFYVGDIDSS 328
            ++ TL E+  H+  ++ W ++ G+VY+ T FL+ HPGG   +  A G+D TD+F  + HS +AKAMM  +++G +  S
Sbjct:  618 RLITLEELRQHDGEEEPWFVVNGQVYNGTPFLEGHPGGAASITGAAGQDVTDEFLAI-HSENAKAMMPTYHIGTLTPS 694          
BLAST of FC928931 vs. ExPASy Swiss-Prot
Match: NIA_USTMA (Nitrate reductase [NADPH] OS=Ustilago maydis GN=NAR1 PE=2 SV=2)

HSP 1 Score: 67.781 bits (164), Expect = 6.036e-11
Identity = 31/77 (40.26%), Postives = 50/77 (64.94%), Query Frame = 2
Query:   98 VYTLAEVSGHNDRK--DCWLIIEGKVYDVTKFLDDHPGGDEVLLSATGKDATDDFEDVGHSSSAKAMMDEFYVGDID 322
            + T A+++ H D +  + W ++ G VYD T FL DHPGGD+ +    G+DAT+DF  + HS  AK M+ +F++G ++
Sbjct:  587 IITAADLAAHGDGEGPEPWFVVHGHVYDGTGFLKDHPGGDQSIRLVAGEDATEDFMAI-HSMDAKKMLRDFHLGRLE 662          
BLAST of FC928931 vs. ExPASy Swiss-Prot
Match: NIA_LEPMC (Nitrate reductase [NADPH] OS=Leptosphaeria maculans GN=NIAD PE=3 SV=2)

HSP 1 Score: 67.781 bits (164), Expect = 6.036e-11
Identity = 30/78 (38.46%), Postives = 49/78 (62.82%), Query Frame = 2
Query:   86 GEGKVYTLAEVSGHNDRKDCWLIIEGKVYDVTKFLDDHPGGDEVLLSATGKDATDDFEDVGHSSSAKAMMDEFYVGDI 319
            G  ++  L E+  H   +  W ++  +VYD T FL+ HPGG + ++SA G DA+D+F  + HS +AKAMM  +++G +
Sbjct:  534 GVNRIVELDELKWHESAEYPWFVVNDEVYDGTSFLEGHPGGAQSIISAAGLDASDEFMAI-HSETAKAMMPAYHIGTL 610          
The following BLAST results are available for this feature:
BLAST of FC928931 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 66
Match NameE-valueIdentityDescription
NIA_BEABA2.709e-1134.62Nitrate reductase [NADPH] OS=Beauveria bassiana GN... [more]
NB5R4_XENTR2.709e-1140.00Cytochrome b5 reductase 4 OS=Xenopus tropicalis GN... [more]
NIA7_HORVU3.539e-1136.99Nitrate reductase [NAD(P)H] OS=Hordeum vulgare GN=... [more]
NIA_NEUCR4.622e-1138.46Nitrate reductase [NADPH] OS=Neurospora crassa GN=... [more]
NIA_USTMA6.036e-1140.26Nitrate reductase [NADPH] OS=Ustilago maydis GN=NA... [more]
NIA_LEPMC6.036e-1138.46Nitrate reductase [NADPH] OS=Leptosphaeria maculan... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAH1CF08RM2 PhII-IIIV1 Citrus clementina cDNA clone KN0AAH1CF08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC928931 ID=FC928931; Name=FC928931; organism=Citrus clementina; type=EST; length=678bp
AAATCCGCTCCTCCTGGTGCTCACCTACTGGGCATAAAAGTTTCACGTTT
TTCCCTGAAAAATCTGACCTTTTTTACAAATGGGCGGAGAGGGCAAGGTA
TACACTTTGGCTGAGGTCTCTGGGCACAACGACCGCAAGGACTGTTGGCT
TATCATTGAGGGCAAGGTATATGATGTGACAAAATTCTTGGATGACCATC
CTGGTGGAGACGAGGTATTGTTGTCTGCCACAGGAAAGGATGCGACTGAT
GACTTTGAGGATGTTGGTCACAGTAGCAGTGCAAAAGCGATGATGGATGA
ATTCTATGTGGGTGACATTGATTCATCAACCGTTCCCACCAAGACCAAGT
ACACCCCTCCCAAGCAGCCTCACTACAACCAAGACAAGACACCCGAGTTT
ATTATAAAGCTCCTCCAGTTCCTAGTTCCTCTGCTAATCTTAGGATTGGC
TGTTGGCATCCGCTTCTATACCAAATCCGCTTAATGATACCTTGCAAGAT
AAAAATACATTTACAATAAATCTATATCCGTTGCATTGCACCTTGTTTTT
ACTAGTTGTTTGGAACTATTATCACCAGAAAATGTAGGGTTCTTTATCTT
TTGTGATGGCATGTGCTTGTGTTTGATAAGTGACCATTCACTGCCCGCAT
GACTTGGAATGCAATGATCAATTTGCAG
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