FC928938

Overview
NameFC928938
Unique NameFC928938
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length711
Libraries
Library NameType
PhII-IIIV1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig6173 contig Ccv1_Contig6173:36..746. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC928938 vs. ExPASy Swiss-Prot
Match: ALDOC_MOUSE (Fructose-bisphosphate aldolase C OS=Mus musculus GN=Aldoc PE=1 SV=4)

HSP 1 Score: 256.144 bits (653), Expect = 1.309e-67
Identity = 134/208 (64.42%), Postives = 155/208 (74.52%), Query Frame = 1
Query:   91 ELIKNAAYIGTPGKGILAADESTGTIGKRLSSINVENVESNRRALRELLFCTPGALQY-LSGVILFEETLYQKTAAGKPFVDVLKEGGVLPGIKVDKGTVELAGTNGETTTQGLDGLAQRCQKYYEAGARFAKWRAVLKIGPNEPSQLAINENANGLARYAIICQENGLVPIVEPEILVDGPHDIKKCADVTERVLAACYKALNDHHV 711
            EL   A  I TPGKGILAADES G++ KRLS I VEN E NRR  R++LF     ++  + GVI F ETLYQK   G PFV  +++ G+L GIKVDKG V LAGT+GETTTQGLDGL +RC +Y + GA FAKWR VLKI    PS LAI ENAN LARYA ICQ+NG+VPIVEPEIL DG HD+K+C  VTE+VLAA YKAL+DHHV
Sbjct:   15 ELSDIALRIVTPGKGILAADESVGSMAKRLSQIGVENTEENRRLYRQVLFSADDRVKKCIGGVIFFHETLYQKDDNGVPFVRTIQDKGILVGIKVDKGVVPLAGTDGETTTQGLDGLLERCAQYKKDGADFAKWRCVLKISDRTPSALAILENANVLARYASICQQNGIVPIVEPEILPDGDHDLKRCQYVTEKVLAAVYKALSDHHV 222          
BLAST of FC928938 vs. ExPASy Swiss-Prot
Match: ALDOB_DANRE (Fructose-bisphosphate aldolase B OS=Danio rerio GN=aldob PE=2 SV=1)

HSP 1 Score: 256.144 bits (653), Expect = 1.309e-67
Identity = 133/208 (63.94%), Postives = 156/208 (75.00%), Query Frame = 1
Query:   91 ELIKNAAYIGTPGKGILAADESTGTIGKRLSSINVENVESNRRALRELLFCTPGAL-QYLSGVILFEETLYQKTAAGKPFVDVLKEGGVLPGIKVDKGTVELAGTNGETTTQGLDGLAQRCQKYYEAGARFAKWRAVLKIGPNEPSQLAINENANGLARYAIICQENGLVPIVEPEILVDGPHDIKKCADVTERVLAACYKALNDHHV 711
            EL   A  I  PGKGILAADESTGT+ KR   INVEN E NRR+ R+LLF    ++ + + GVILF ETLYQK+  G  F  V+K+ G++ GIKVDKGT  LAGT+GETTTQGLDGL++RC +Y + G  FAKWR VLKI  + PS L I ENAN LARYA ICQ+NGLVPIVEPEIL DG HD+K+C   TE+VLAA YKAL+DHHV
Sbjct:   15 ELATIAERIVAPGKGILAADESTGTMAKRFQKINVENTEENRRSFRDLLFSVDDSISESIGGVILFHETLYQKSDKGVLFPKVIKDKGIVVGIKVDKGTAGLAGTDGETTTQGLDGLSERCAQYKKDGCDFAKWRCVLKISDSCPSALGIAENANVLARYASICQQNGLVPIVEPEILPDGDHDLKQCQYATEKVLAAVYKALSDHHV 222          
BLAST of FC928938 vs. ExPASy Swiss-Prot
Match: ALDOC_RAT (Fructose-bisphosphate aldolase C OS=Rattus norvegicus GN=Aldoc PE=1 SV=3)

HSP 1 Score: 255.373 bits (651), Expect = 2.232e-67
Identity = 134/208 (64.42%), Postives = 154/208 (74.04%), Query Frame = 1
Query:   91 ELIKNAAYIGTPGKGILAADESTGTIGKRLSSINVENVESNRRALRELLFCTPGALQY-LSGVILFEETLYQKTAAGKPFVDVLKEGGVLPGIKVDKGTVELAGTNGETTTQGLDGLAQRCQKYYEAGARFAKWRAVLKIGPNEPSQLAINENANGLARYAIICQENGLVPIVEPEILVDGPHDIKKCADVTERVLAACYKALNDHHV 711
            EL   A  I  PGKGILAADES G++ KRLS I VEN E NRR  R++LF     ++  + GVI F ETLYQK   G PFV  ++E G+L GIKVDKG V LAGT+GETTTQGLDGL +RC +Y + GA FAKWR VLKI    PS LAI ENAN LARYA ICQ+NG+VPIVEPEIL DG HD+K+C  VTE+VLAA YKAL+DHHV
Sbjct:   15 ELSDIALRIVAPGKGILAADESVGSMAKRLSQIGVENTEENRRLYRQVLFSADDRVKKCIGGVIFFHETLYQKDDNGVPFVRTIQEKGILVGIKVDKGVVPLAGTDGETTTQGLDGLLERCAQYKKDGADFAKWRCVLKISDRTPSALAILENANVLARYASICQQNGIVPIVEPEILPDGDHDLKRCQFVTEKVLAAVYKALSDHHV 222          
BLAST of FC928938 vs. ExPASy Swiss-Prot
Match: ALDOC_MACFA (Fructose-bisphosphate aldolase C OS=Macaca fascicularis GN=ALDOC PE=2 SV=3)

HSP 1 Score: 253.832 bits (647), Expect = 6.495e-67
Identity = 132/208 (63.46%), Postives = 155/208 (74.52%), Query Frame = 1
Query:   91 ELIKNAAYIGTPGKGILAADESTGTIGKRLSSINVENVESNRRALRELLFCTPGALQY-LSGVILFEETLYQKTAAGKPFVDVLKEGGVLPGIKVDKGTVELAGTNGETTTQGLDGLAQRCQKYYEAGARFAKWRAVLKIGPNEPSQLAINENANGLARYAIICQENGLVPIVEPEILVDGPHDIKKCADVTERVLAACYKALNDHHV 711
            EL   A  I  PGKGILAADES G++ KRLS I VEN E NRR  R++LF     ++  + GVI F ETLYQK   G PFV  +++ G++ GIKVDKG V LAGT+GETTTQGLDGL++RC +Y + GA FAKWR VLKI    PS LAI ENAN LARYA ICQ+NG+VPIVEPEIL DG HD+K+C  VTE+VLAA YKAL+DHHV
Sbjct:   15 ELSDIALRIVAPGKGILAADESVGSMAKRLSQIGVENTEENRRLYRQVLFSADDRVKKCIGGVIFFHETLYQKDDNGVPFVRTIQDKGIVVGIKVDKGVVPLAGTDGETTTQGLDGLSERCAQYKKDGADFAKWRCVLKISERTPSALAILENANVLARYASICQQNGIVPIVEPEILPDGDHDLKRCQYVTEKVLAAVYKALSDHHV 222          
BLAST of FC928938 vs. ExPASy Swiss-Prot
Match: ALDOC_HUMAN (Fructose-bisphosphate aldolase C OS=Homo sapiens GN=ALDOC PE=1 SV=2)

HSP 1 Score: 253.832 bits (647), Expect = 6.495e-67
Identity = 132/208 (63.46%), Postives = 155/208 (74.52%), Query Frame = 1
Query:   91 ELIKNAAYIGTPGKGILAADESTGTIGKRLSSINVENVESNRRALRELLFCTPGALQY-LSGVILFEETLYQKTAAGKPFVDVLKEGGVLPGIKVDKGTVELAGTNGETTTQGLDGLAQRCQKYYEAGARFAKWRAVLKIGPNEPSQLAINENANGLARYAIICQENGLVPIVEPEILVDGPHDIKKCADVTERVLAACYKALNDHHV 711
            EL   A  I  PGKGILAADES G++ KRLS I VEN E NRR  R++LF     ++  + GVI F ETLYQK   G PFV  +++ G++ GIKVDKG V LAGT+GETTTQGLDGL++RC +Y + GA FAKWR VLKI    PS LAI ENAN LARYA ICQ+NG+VPIVEPEIL DG HD+K+C  VTE+VLAA YKAL+DHHV
Sbjct:   15 ELSDIALRIVAPGKGILAADESVGSMAKRLSQIGVENTEENRRLYRQVLFSADDRVKKCIGGVIFFHETLYQKDDNGVPFVRTIQDKGIVVGIKVDKGVVPLAGTDGETTTQGLDGLSERCAQYKKDGADFAKWRCVLKISERTPSALAILENANVLARYASICQQNGIVPIVEPEILPDGDHDLKRCQYVTEKVLAAVYKALSDHHV 222          
BLAST of FC928938 vs. ExPASy Swiss-Prot
Match: ALDOB_SPAAU (Fructose-bisphosphate aldolase B OS=Sparus aurata GN=aldob PE=2 SV=2)

HSP 1 Score: 253.832 bits (647), Expect = 6.495e-67
Identity = 131/208 (62.98%), Postives = 155/208 (74.52%), Query Frame = 1
Query:   91 ELIKNAAYIGTPGKGILAADESTGTIGKRLSSINVENVESNRRALRELLFCTPGAL-QYLSGVILFEETLYQKTAAGKPFVDVLKEGGVLPGIKVDKGTVELAGTNGETTTQGLDGLAQRCQKYYEAGARFAKWRAVLKIGPNEPSQLAINENANGLARYAIICQENGLVPIVEPEILVDGPHDIKKCADVTERVLAACYKALNDHHV 711
            EL   A  I  PGKGILAADESTGT+GKR  +INVEN+E NRR  R++LF T  ++   + G+I F ETLYQK++ GK F  V+KE G++ GIKVDKGT  L GT+ ETTTQGLDGL++RC +Y + G  FAKWR VLKI    P  LAI ENAN LARYA ICQ NGLVPIVEPEIL DG HD+++C   TE+VLAA YKAL+DHHV
Sbjct:   15 ELSDIAQRIVAPGKGILAADESTGTMGKRFQNINVENIEENRRCFRDILFSTDASIANCVGGIIFFHETLYQKSSNGKLFPQVVKEKGIVVGIKVDKGTAPLMGTDKETTTQGLDGLSERCAQYKKDGCDFAKWRCVLKISDGCPFALAIAENANVLARYASICQMNGLVPIVEPEILPDGDHDLQRCQYATEKVLAAVYKALSDHHV 222          
BLAST of FC928938 vs. ExPASy Swiss-Prot
Match: ALDOB_BOVIN (Fructose-bisphosphate aldolase B OS=Bos taurus GN=ALDOB PE=2 SV=1)

HSP 1 Score: 253.447 bits (646), Expect = 8.482e-67
Identity = 132/207 (63.77%), Postives = 152/207 (73.43%), Query Frame = 1
Query:   94 LIKNAAYIGTPGKGILAADESTGTIGKRLSSINVENVESNRRALRELLFCTPGAL-QYLSGVILFEETLYQKTAAGKPFVDVLKEGGVLPGIKVDKGTVELAGTNGETTTQGLDGLAQRCQKYYEAGARFAKWRAVLKIGPNEPSQLAINENANGLARYAIICQENGLVPIVEPEILVDGPHDIKKCADVTERVLAACYKALNDHHV 711
            L + A  I   GKGILAADES GT+G RL  I VEN E NRR  RELLF    ++ Q + GVILF ETLYQK   GK F D+LKE G++ GIK+D+G   LAGTN ETT QGLDGL++RC +Y + GA F KWRAVLKI    PS LAI ENAN LARYA ICQ+NGLVPIVEPE++ DG HD++ C  VTE+VLAA YKALNDHHV
Sbjct:   16 LSETARRIVANGKGILAADESVGTMGNRLQRIKVENTEENRRQFRELLFTVDSSVSQSIGGVILFHETLYQKDGQGKLFRDILKEKGIVVGIKLDQGVAPLAGTNKETTVQGLDGLSERCAQYKKDGADFGKWRAVLKIDNQCPSHLAIQENANTLARYASICQQNGLVPIVEPEVIPDGSHDMEHCQYVTEKVLAAVYKALNDHHV 222          
BLAST of FC928938 vs. ExPASy Swiss-Prot
Match: ALDOC_PANTR (Fructose-bisphosphate aldolase C OS=Pan troglodytes GN=ALDOC PE=2 SV=3)

HSP 1 Score: 252.292 bits (643), Expect = 1.890e-66
Identity = 131/208 (62.98%), Postives = 154/208 (74.04%), Query Frame = 1
Query:   91 ELIKNAAYIGTPGKGILAADESTGTIGKRLSSINVENVESNRRALRELLFCTPGALQY-LSGVILFEETLYQKTAAGKPFVDVLKEGGVLPGIKVDKGTVELAGTNGETTTQGLDGLAQRCQKYYEAGARFAKWRAVLKIGPNEPSQLAINENANGLARYAIICQENGLVPIVEPEILVDGPHDIKKCADVTERVLAACYKALNDHHV 711
            EL   A  I  PGKGILAADES G++ KRLS I VEN E NRR  R++LF     ++  + GVI F ETLYQK   G PF+  + + G++ GIKVDKG V LAGT+GETTTQGLDGL++RC +Y + GA FAKWR VLKI    PS LAI ENAN LARYA ICQ+NG+VPIVEPEIL DG HD+K+C  VTE+VLAA YKAL+DHHV
Sbjct:   15 ELSDIALRIVAPGKGILAADESVGSMAKRLSQIGVENTEENRRLYRQVLFSADDRVKKCIGGVIFFHETLYQKDDNGVPFIRTILDKGIVVGIKVDKGVVPLAGTDGETTTQGLDGLSERCAQYKKDGADFAKWRCVLKISERTPSALAILENANVLARYASICQQNGIVPIVEPEILPDGDHDLKRCQYVTEKVLAAVYKALSDHHV 222          
BLAST of FC928938 vs. ExPASy Swiss-Prot
Match: ALDOB_PONAB (Fructose-bisphosphate aldolase B OS=Pongo abelii GN=ALDOB PE=2 SV=3)

HSP 1 Score: 250.751 bits (639), Expect = 5.498e-66
Identity = 129/208 (62.02%), Postives = 153/208 (73.56%), Query Frame = 1
Query:   91 ELIKNAAYIGTPGKGILAADESTGTIGKRLSSINVENVESNRRALRELLFCTPGAL-QYLSGVILFEETLYQKTAAGKPFVDVLKEGGVLPGIKVDKGTVELAGTNGETTTQGLDGLAQRCQKYYEAGARFAKWRAVLKIGPNEPSQLAINENANGLARYAIICQENGLVPIVEPEILVDGPHDIKKCADVTERVLAACYKALNDHHV 711
            EL + A  I   GKGILAADES GT+G RL  I VEN E NRR  RE+LF    ++ Q + GVILF ETLYQK + GK F ++LKE G++ GIK+D+G   LAGTN ETT QGLDGL++RC +Y + G  F KWRAVL+I    PS LAI ENAN LARYA ICQ+NGLVPIVEPE++ DG HD++ C  VTE+VLAA YKALNDHHV
Sbjct:   15 ELSEIAQSIVANGKGILAADESVGTMGNRLQRIKVENTEENRRQFREILFSVDSSINQSIGGVILFHETLYQKDSQGKLFRNILKEKGIVVGIKLDQGGAPLAGTNKETTIQGLDGLSERCAQYKKDGVDFGKWRAVLRIADQCPSSLAIQENANALARYASICQQNGLVPIVEPEVIPDGDHDLEHCQYVTEKVLAAAYKALNDHHV 222          
BLAST of FC928938 vs. ExPASy Swiss-Prot
Match: ALDOB_RAT (Fructose-bisphosphate aldolase B OS=Rattus norvegicus GN=Aldob PE=1 SV=2)

HSP 1 Score: 250.366 bits (638), Expect = 7.181e-66
Identity = 130/208 (62.50%), Postives = 153/208 (73.56%), Query Frame = 1
Query:   91 ELIKNAAYIGTPGKGILAADESTGTIGKRLSSINVENVESNRRALRELLFCTPGAL-QYLSGVILFEETLYQKTAAGKPFVDVLKEGGVLPGIKVDKGTVELAGTNGETTTQGLDGLAQRCQKYYEAGARFAKWRAVLKIGPNEPSQLAINENANGLARYAIICQENGLVPIVEPEILVDGPHDIKKCADVTERVLAACYKALNDHHV 711
            EL + A  I   GKGILAADES GT+G RL  I VEN E NRR  RELLF    ++ Q + GVILF ETLYQK + GK F ++LKE G++ GIK+D+G   LAGTN ETT QGLDGL++RC +Y + G  F KWRAVL+I    PS LAI ENAN LARYA ICQ+NGLVPIVEPE+L DG HD++ C  V+E+VLAA YKALNDHHV
Sbjct:   15 ELSEIAQRIVANGKGILAADESVGTMGNRLQRIKVENTEENRRQFRELLFSVDNSISQSIGGVILFHETLYQKDSQGKLFRNILKEKGIVVGIKLDQGGAPLAGTNKETTIQGLDGLSERCAQYKKDGVDFGKWRAVLRISDQCPSSLAIQENANALARYASICQQNGLVPIVEPEVLPDGDHDLEHCQYVSEKVLAAVYKALNDHHV 222          
The following BLAST results are available for this feature:
BLAST of FC928938 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 56
Match NameE-valueIdentityDescription
ALDOC_MOUSE1.309e-6764.42Fructose-bisphosphate aldolase C OS=Mus musculus G... [more]
ALDOB_DANRE1.309e-6763.94Fructose-bisphosphate aldolase B OS=Danio rerio GN... [more]
ALDOC_RAT2.232e-6764.42Fructose-bisphosphate aldolase C OS=Rattus norvegi... [more]
ALDOC_MACFA6.495e-6763.46Fructose-bisphosphate aldolase C OS=Macaca fascicu... [more]
ALDOC_HUMAN6.495e-6763.46Fructose-bisphosphate aldolase C OS=Homo sapiens G... [more]
ALDOB_SPAAU6.495e-6762.98Fructose-bisphosphate aldolase B OS=Sparus aurata ... [more]
ALDOB_BOVIN8.482e-6763.77Fructose-bisphosphate aldolase B OS=Bos taurus GN=... [more]
ALDOC_PANTR1.890e-6662.98Fructose-bisphosphate aldolase C OS=Pan troglodyte... [more]
ALDOB_PONAB5.498e-6662.02Fructose-bisphosphate aldolase B OS=Pongo abelii G... [more]
ALDOB_RAT7.181e-6662.50Fructose-bisphosphate aldolase B OS=Rattus norvegi... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAH3BC05RM1 PhII-IIIV1 Citrus clementina cDNA clone KN0AAH3BC05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC928938 ID=FC928938; Name=FC928938; organism=Citrus clementina; type=EST; length=711bp
GGCACGAGGCTCTGTTTCTCCCTCTAACAAAACAAATTTTCTATCTTCAA
GTCGATCACCATGTCTTGCTTCAAGGGCAAATACGCCGATGAGCTCATTA
AAAACGCTGCCTACATTGGCACCCCTGGAAAGGGTATCCTTGCTGCTGAT
GAGTCAACAGGCACCATTGGCAAGCGTCTATCCAGCATCAATGTTGAGAA
TGTTGAGTCAAACAGGCGTGCTCTCCGCGAGCTCCTTTTCTGCACTCCCG
GTGCCCTTCAGTACCTCAGTGGTGTCATCCTCTTCGAGGAGACCCTCTAC
CAGAAGACTGCTGCTGGCAAGCCCTTTGTTGATGTCTTGAAGGAGGGTGG
AGTCCTCCCTGGAATTAAGGTTGACAAGGGTACTGTTGAGCTTGCTGGTA
CCAATGGTGAGACCACCACCCAGGGTCTTGATGGCCTCGCCCAGCGCTGC
CAGAAATACTATGAAGCTGGTGCTCGTTTTGCCAAATGGCGTGCTGTTCT
TAAGATTGGCCCTAATGAGCCTTCGCAGCTGGCCATCAATGAGAATGCCA
ATGGCCTGGCCCGATATGCTATCATCTGCCAGGAGAATGGCCTTGTTCCC
ATTGTTGAACCTGAGATCCTTGTTGACGGTCCCCATGACATCAAGAAGTG
TGCTGATGTGACCGAGCGTGTTCTTGCTGCATGCTACAAGGCTCTGAATG
ACCACCATGTC
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