FC928997
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC928997 vs. ExPASy Swiss-Prot
Match: HS189_ORYSJ (18.9 kDa heat shock protein OS=Oryza sativa subsp. japonica GN=HSP18.9 PE=2 SV=1) HSP 1 Score: 81.2629 bits (199), Expect = 6.192e-15 Identity = 41/101 (40.59%), Postives = 65/101 (64.36%), Query Frame = 2 Query: 140 AKAMAATPA----DVKEYPNSYVFIVDMPGLKSGDIKVQVEDDNVLLISGERKREEEKDGAKYVRMERRVGKFMRKFVLPENANVEAISAVCQDGVLTVTV 430 A A A P+ D KE ++VF+ DMPG++ +++V+VE++ VL ISG+R R E+ G ++ R+ER +F+R LP NAN + + A +GVLT+T+ Sbjct: 60 AAAAAGVPSTASMDWKETAAAHVFMADMPGVRREEVRVEVEEEKVLRISGQRARAAEEKGERWHRVERSSERFVRTVRLPPNANTDGVHAALDNGVLTITI 160
BLAST of FC928997 vs. ExPASy Swiss-Prot
Match: HS232_ORYSJ (23.2 kDa heat shock protein OS=Oryza sativa subsp. japonica GN=HSP23.2 PE=2 SV=2) HSP 1 Score: 78.1814 bits (191), Expect = 5.242e-14 Identity = 40/100 (40.00%), Postives = 66/100 (66.00%), Query Frame = 2 Query: 137 DAKAMAATPADVKEYPNSYVFIVDMPGLKSGDIKVQVEDDNVLLISGERKREEEKD----GAKYVRMERRVGKFMRKFVLPENANVEAISAVCQDGVLTV 424 D ++ D +E +++ +VD+PG++ D++V+VED+ VL ISGER+REE + G + R ER G+F R+ LP+NA++++I+A +GVLTV Sbjct: 69 DVAMLSMARVDWRETGDAHEVVVDVPGMRKEDLRVEVEDNRVLRISGERRREETTEQKGGGDHWHREERSYGRFWRQLRLPDNADLDSIAASLDNGVLTV 168
BLAST of FC928997 vs. ExPASy Swiss-Prot
Match: HS17B_ORYSJ (17.9 kDa heat shock protein 2 OS=Oryza sativa subsp. japonica GN=HSP17.9B PE=2 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 6.407e-12 Identity = 38/99 (38.38%), Postives = 60/99 (60.61%), Query Frame = 2 Query: 137 DAKAMAATPADVKEYPNSYVFIVDMP-GLKSGDIKVQVEDDNVLLISGERKREEEKDGAKYVRMERRVGKFMRKFVLPENANVEAISAVCQDGVLTVTV 430 D A A T + +E +YVF D+P G+K +++V+V++ NVL+I+GER E+ G + +ER F +F LP++A V+ + A G+LTVTV Sbjct: 34 DTSAFANTYIESRETAEAYVFRADLPAGVKKEEVRVEVDEGNVLVITGERSVRREEKGQRSHHIERSCATFFGRFHLPDDAVVDLVRASMDGGMLTVTV 132
BLAST of FC928997 vs. ExPASy Swiss-Prot
Match: HS157_ARATH (15.7 kDa heat shock protein, peroxisomal OS=Arabidopsis thaliana GN=HSP15.7 PE=1 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 8.368e-12 Identity = 38/93 (40.86%), Postives = 56/93 (60.22%), Query Frame = 2 Query: 167 DVKEYPNSYVFIVDMPGLKSGDIKVQVEDDNVLLISGERKREEEKDGAKYVRMERRV-----GKFMRKFVLPENANVEAISAVCQDGVLTVTV 430 D E NS++F +++PG DIKVQ+E+ NVL I GE +EE+K+ + ER +F+R+ LPEN V+ + A ++GVLTV V Sbjct: 25 DWMESNNSHIFKINVPGYNKEDIKVQIEEGNVLSIRGEGIKEEKKENLVWHVAEREAFSGGGSEFLRRIELPENVKVDQVKAYVENGVLTVVV 117
BLAST of FC928997 vs. ExPASy Swiss-Prot
Match: HSP16_ORYSJ (16.0 kDa heat shock protein, peroxisomal OS=Oryza sativa subsp. japonica GN=HSP16.0 PE=2 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 1.093e-11 Identity = 45/104 (43.27%), Postives = 57/104 (54.81%), Query Frame = 2 Query: 140 AKAMAATPADVKEYPNSYVFIVDMPGLKSGDIKVQVEDDNVLLISG-------ERKREEEKDGAKYVRMERRVGKFMRKFVLPENANVEAISAVCQDGVLTVTV 430 A A A D E P S+V +++PGL D+KVQVED NVL + G E++RE EKD +V ER +F R+ LP VE I A +GVLTV V Sbjct: 24 ASASATAAMDWVETPTSHVLRINVPGLGKDDVKVQVEDGNVLTVRGAAPHAAAEKEREREKDVVWHV-AERGRPEFAREVALPAEVRVEQIRASVDNGVLTVVV 126
BLAST of FC928997 vs. ExPASy Swiss-Prot
Match: HS22C_CHLRE (Heat shock 22 kDa protein, chloroplastic OS=Chlamydomonas reinhardtii PE=2 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 4.153e-11 Identity = 38/92 (41.30%), Postives = 54/92 (58.70%), Query Frame = 2 Query: 161 PADVKEYPNSYVFIVDMPGLKSGDIKVQVEDDNVLLISGERKREE--EKDGAKYVRMERRVGKFMRKFVLPENANVEAISAVCQDGVLTVTV 430 P D+ E P ++ D PG+ D+KV++++ VL+++GERK ++ G K R ER F R F LPENAN + I+A GVL VTV Sbjct: 48 PMDIIESPTAFELHADAPGMGPDDVKVELQE-GVLMVTGERKLSHTTKEAGGKVWRSERTAYSFSRAFSLPENANPDGITAAMDKGVLVVTV 138 The following BLAST results are available for this feature:
BLAST of FC928997 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 56
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Sequences
The
following sequences are available for this feature:
EST sequence >FC928997 ID=FC928997; Name=FC928997; organism=Citrus clementina; type=EST; length=740bpback to top |