FC929004
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC929004 vs. ExPASy Swiss-Prot
Match: RL32_DROMD (60S ribosomal protein L32 OS=Drosophila madeirensis GN=RpL32 PE=3 SV=1) HSP 1 Score: 157.147 bits (396), Expect = 7.700e-38 Identity = 76/112 (67.86%), Postives = 87/112 (77.68%), Query Frame = -3 Query: 248 QGDRKISVKENWRRPKGID*RVRRKFKGCVLMPNIGYGSDKKTRHYLPNGFKKFVVHNVNELELLMMHNRTYCAEIAHNVSTKKRKEIVERGAQLVVVVTNKLARLRSQEEE 583 Q DR + WR+PKGID RVRR+FKG LMPNIGYGS+K+TRH LP GFKKF+VHNV ELE+L+M NR YC EIAH VS+KKRKEIVER QL + +TN RLRSQE E Sbjct: 23 QSDRYAKLSHKWRKPKGIDNRVRRRFKGQYLMPNIGYGSNKRTRHMLPTGFKKFLVHNVRELEVLLMQNRIYCGEIAHAVSSKKRKEIVERAKQLSIRLTNPNGRLRSQENE 134
BLAST of FC929004 vs. ExPASy Swiss-Prot
Match: RL32_DROGU (60S ribosomal protein L32 OS=Drosophila guanche GN=RpL32 PE=3 SV=1) HSP 1 Score: 157.147 bits (396), Expect = 7.700e-38 Identity = 76/112 (67.86%), Postives = 87/112 (77.68%), Query Frame = -3 Query: 248 QGDRKISVKENWRRPKGID*RVRRKFKGCVLMPNIGYGSDKKTRHYLPNGFKKFVVHNVNELELLMMHNRTYCAEIAHNVSTKKRKEIVERGAQLVVVVTNKLARLRSQEEE 583 Q DR + WR+PKGID RVRR+FKG LMPNIGYGS+K+TRH LP GFKKF+VHNV ELE+L+M NR YC EIAH VS+KKRKEIVER QL + +TN RLRSQE E Sbjct: 23 QSDRYAKLSHKWRKPKGIDNRVRRRFKGQYLMPNIGYGSNKRTRHMLPTGFKKFLVHNVRELEVLLMQNRIYCGEIAHAVSSKKRKEIVERAKQLSIRLTNPNGRLRSQENE 134
BLAST of FC929004 vs. ExPASy Swiss-Prot
Match: RL32_DROBF (60S ribosomal protein L32 OS=Drosophila bifasciata GN=RpL32 PE=3 SV=1) HSP 1 Score: 157.147 bits (396), Expect = 7.700e-38 Identity = 76/112 (67.86%), Postives = 87/112 (77.68%), Query Frame = -3 Query: 248 QGDRKISVKENWRRPKGID*RVRRKFKGCVLMPNIGYGSDKKTRHYLPNGFKKFVVHNVNELELLMMHNRTYCAEIAHNVSTKKRKEIVERGAQLVVVVTNKLARLRSQEEE 583 Q DR + WR+PKGID RVRR+FKG LMPNIGYGS+K+TRH LP GFKKF+VHNV ELE+L+M NR YC EIAH VS+KKRKEIVER QL + +TN RLRSQE E Sbjct: 23 QSDRYAKLSHKWRKPKGIDNRVRRRFKGQYLMPNIGYGSNKRTRHMLPTGFKKFLVHNVRELEVLLMQNRIYCGEIAHAVSSKKRKEIVERAKQLSIRLTNPNGRLRSQENE 134
BLAST of FC929004 vs. ExPASy Swiss-Prot
Match: RL32_APIME (60S ribosomal protein L32 OS=Apis mellifera GN=RpL32 PE=2 SV=1) HSP 1 Score: 155.606 bits (392), Expect = 2.240e-37 Identity = 77/112 (68.75%), Postives = 87/112 (77.68%), Query Frame = -3 Query: 248 QGDRKISVKENWRRPKGID*RVRRKFKGCVLMPNIGYGSDKKTRHYLPNGFKKFVVHNVNELELLMMHNRTYCAEIAHNVSTKKRKEIVERGAQLVVVVTNKLARLRSQEEE 583 Q DR +K NWR+PKGID RVRR+FKG LMPNIGYGS+KKTRH LP GF+K +VHNV ELE+LMM NR +CAEIAH S+KKRK IVER QL + VT ARLRSQE E Sbjct: 23 QSDRYSKLKRNWRKPKGIDNRVRRRFKGQYLMPNIGYGSNKKTRHMLPTGFRKVLVHNVKELEVLMMQNRKFCAEIAHGGSSKKRKSIVERAQQLSIRVTYASARLRSQENE 134
BLAST of FC929004 vs. ExPASy Swiss-Prot
Match: RL32P_MOUSE (Putative 60S ribosomal protein L32' OS=Mus musculus GN=Rpl32-ps PE=5 SV=2) HSP 1 Score: 147.517 bits (371), Expect = 6.101e-35 Identity = 70/112 (62.50%), Postives = 89/112 (79.46%), Query Frame = -3 Query: 248 QGDRKISVKENWRRPKGID*RVRRKFKGCVLMPNIGYGSDKKTRHYLPNGFKKFVVHNVNELELLMMHNRTYCAEIAHNVSTKKRKEIVERGAQLVVVVTNKLARLRSQEEE 583 Q DR + +K NWR+P+GID RVRR+FKG +LMPNIGY S+KKT+H L +GF+KF+VHN+ E E+L+M N++Y AEIAHNVS+K RK IVER AQL + VTN RL S+E E Sbjct: 24 QSDRYVKIKWNWRKPRGIDNRVRRRFKGQILMPNIGYRSNKKTKHTLSSGFRKFLVHNIKEPEVLLMCNKSYRAEIAHNVSSKNRKAIVERAAQLAIRVTNPNTRLHSEENE 135
BLAST of FC929004 vs. ExPASy Swiss-Prot
Match: RL32_NEUCR (60S ribosomal protein L32 OS=Neurospora crassa GN=rpl-32 PE=3 SV=1) HSP 1 Score: 136.346 bits (342), Expect = 1.407e-31 Identity = 64/109 (58.72%), Postives = 85/109 (77.98%), Query Frame = -3 Query: 257 QGDRKISVKENWRRPKGID*RVRRKFKGCVLMPNIGYGSDKKTRHYLPNGFKKFVVHNVNELELLMMHNRTYCAEIAHNVSTKKRKEIVERGAQLVVVVTNKLARLRSQ 583 Q DR + V WR+PKGID RVRR+F+G + MP+IGYGS+KKTRH +P+G K F+V NV ++ELL+MHN+TY AEIAHNVS++KR EI+ R QL V VTN A++ ++ Sbjct: 22 QSDRFMRVDSAWRKPKGIDNRVRRRFRGTLAMPSIGYGSNKKTRHMMPSGHKAFLVSNVKDVELLLMHNKTYAAEIAHNVSSRKRIEIIARAKQLSVKVTNAKAKVTTE 130
BLAST of FC929004 vs. ExPASy Swiss-Prot
Match: RL32A_SCHPO (60S ribosomal protein L32-A OS=Schizosaccharomyces pombe GN=rpl32a PE=1 SV=2) HSP 1 Score: 133.265 bits (334), Expect = 1.191e-30 Identity = 65/110 (59.09%), Postives = 85/110 (77.27%), Query Frame = -3 Query: 254 QGDRKISVKENWRRPKGID*RVRRKFKGCVLMPNIGYGSDKKTRHYLPNGFKKFVVHNVNELELLMMHNRTYCAEIAHNVSTKKRKEIVERGAQLVVVVTNKLARLRSQE 583 Q DR V E+WR+P+GID VRR+F+G + MP IGYG++KKTR+ +PNG K F+V NV+++ELL+MHN+TY AEIA NVS +KR EIVE+ L V VTN A++RSQE Sbjct: 18 QSDRFKRVGESWRKPRGIDSCVRRRFRGTISMPKIGYGNNKKTRYCMPNGLKAFLVRNVSDVELLLMHNKTYAAEIAGNVSARKRVEIVEKARALGVKVTNAGAKVRSQE 127
BLAST of FC929004 vs. ExPASy Swiss-Prot
Match: RL32B_SCHPO (60S ribosomal protein L32-B OS=Schizosaccharomyces pombe GN=rpl32b PE=2 SV=1) HSP 1 Score: 130.954 bits (328), Expect = 5.910e-30 Identity = 64/110 (58.18%), Postives = 84/110 (76.36%), Query Frame = -3 Query: 254 QGDRKISVKENWRRPKGID*RVRRKFKGCVLMPNIGYGSDKKTRHYLPNGFKKFVVHNVNELELLMMHNRTYCAEIAHNVSTKKRKEIVERGAQLVVVVTNKLARLRSQE 583 Q D V E+WR+P+GID VRR+F+G + MP IGYG++KKTR+ +PNG K F+V NV+++ELL+MHN+TY AEIA NVS +KR EIVE+ L V VTN A++RSQE Sbjct: 18 QSDLFKRVGESWRKPRGIDSCVRRRFRGTISMPKIGYGNNKKTRYCMPNGLKAFLVRNVSDVELLLMHNKTYAAEIASNVSARKRVEIVEKARALGVKVTNAGAKVRSQE 127
BLAST of FC929004 vs. ExPASy Swiss-Prot
Match: RL32_DICDI (60S ribosomal protein L32 OS=Dictyostelium discoideum GN=rpl32 PE=3 SV=1) HSP 1 Score: 122.094 bits (305), Expect = 2.745e-27 Identity = 62/112 (55.36%), Postives = 77/112 (68.75%), Query Frame = -3 Query: 248 QGDRKISVKENWRRPKGID*RVRRKFKGCVLMPNIGYGSDKKTRHYLPNGFKKFVVHNVNELELLMMHNRTYCAEIAHNVSTKKRKEIVERGAQLVVVVTNKLARLRSQEEE 583 Q D V +WR+P+GID RVRR+F G MP+IG+GS K T+ P+GFK+FV+ NV ELE+L+M NR Y A I H VS K RK IVER A+L + VT ARLRS+E E Sbjct: 22 QSDLFKRVGASWRKPRGIDNRVRRRFSGSRAMPSIGFGSAKATKDVCPDGFKRFVIRNVQELEVLLMQNRRYAAVIFHGVSAKSRKAIVERAAELNIKVTTPNARLRSEERE 133
BLAST of FC929004 vs. ExPASy Swiss-Prot
Match: RL32_ASHGO (60S ribosomal protein L32 OS=Ashbya gossypii GN=RPL32 PE=3 SV=1) HSP 1 Score: 111.694 bits (278), Expect = 3.710e-24 Identity = 56/104 (53.85%), Postives = 71/104 (68.27%), Query Frame = -3 Query: 266 DRKISVKENWRRPKGID*RVRRKFKGCVLMPNIGYGSDKKTRHYLPNGFKKFVVHNVNELELLMMHNRTYCAEIAHNVSTKKRKEIVERGAQLVVVVTNKLARL 577 DR V ENWR+ KGID VRR+F+G + P IGYGS+KKTR P+G K ++V N+ +LE+LMMH +TY AEIA NVS+K R I+ R L + VTN RL Sbjct: 24 DRYHRVAENWRKQKGIDSVVRRRFRGQISEPTIGYGSNKKTRFMTPSGHKTYLVSNIKDLEVLMMHTKTYAAEIASNVSSKNRVSILARAKALGIKVTNPKGRL 127 The following BLAST results are available for this feature:
BLAST of FC929004 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 45
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Sequences
The
following sequences are available for this feature:
EST sequence >FC929004 ID=FC929004; Name=FC929004; organism=Citrus clementina; type=EST; length=684bpback to top |