FC929037

Overview
NameFC929037
Unique NameFC929037
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length830
Libraries
Library NameType
PhII-IIIV1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC929037 vs. ExPASy Swiss-Prot
Match: PPIA_STRCH (Peptidyl-prolyl cis-trans isomerase A OS=Streptomyces chrysomallus GN=ppiA PE=1 SV=1)

HSP 1 Score: 169.859 bits (429), Expect = 1.608e-41
Identity = 91/159 (57.23%), Postives = 104/159 (65.41%), Query Frame = 3
Query:  360 KVFFDMTVGGQPAGRIVMELFADVTPRTAENFRALCTGEKGIGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSXFADENFVKKHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFRSVV--EGMDVVKAIEKVGSSSGRTTS 830
            KV+FD+T+   PAGRI   LF DV P+TAENFRAL TGEKG G       Y GSSFHRVI  FM Q            +SIYG  FADENF  KH   G+LSMANAG  TNGSQFF+ T  T WLDGKHVVF  V   + M +V+ IE +GSSSGRT++
Sbjct:    4 KVYFDITIDDAPAGRITFNLFDDVVPKTAENFRALATGEKGFG-------YAGSSFHRVITDFMLQGGDFTRGDGTGGKSIYGEKFADENFQLKHDRVGLLSMANAGKNTNGSQFFITTVLTPWLDGKHVVFGEVADDDSMALVRKIEALGSSSGRTSA 155          
BLAST of FC929037 vs. ExPASy Swiss-Prot
Match: CYPH_UROFA (Peptidyl-prolyl cis-trans isomerase OS=Uromyces fabae GN=PIG28 PE=2 SV=1)

HSP 1 Score: 169.859 bits (429), Expect = 1.608e-41
Identity = 89/156 (57.05%), Postives = 101/156 (64.74%), Query Frame = 3
Query:  366 FFDMTVGGQPAGRIVMELFADVTPRTAENFRALCTGEKGIGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSXFADENFVKKHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFRSVVEGMD-VVKAIEKVGSSSGRTTS 830
            +FD++  G+P GRIV EL+ DV PRT  NFR LC    G G       +K S FHRVIP FM Q            ESIYG  F DENF KKH   G+LSMANAGP TNGSQFF+   KT WLDGKHVVF  V+EG D VVKA+EK GS SG+T+S
Sbjct:    5 YFDVSSNGKPLGRIVFELYDDVVPRTTNNFRQLCLNPPGKG-------FKHSIFHRVIPDFMIQGGDFTNGNGTGGESIYGKKFEDENFQKKHVERGMLSMANAGPNTNGSQFFITVTKTPWLDGKHVVFGKVIEGYDQVVKAMEKTGSQSGKTSS 153          
BLAST of FC929037 vs. ExPASy Swiss-Prot
Match: PPIB_ORPSP (Peptidyl-prolyl cis-trans isomerase B OS=Orpinomyces sp. (strain PC-2) GN=CYPB PE=1 SV=1)

HSP 1 Score: 168.703 bits (426), Expect = 3.582e-41
Identity = 87/153 (56.86%), Postives = 100/153 (65.36%), Query Frame = 3
Query:  360 KVFFDMTVGGQPAGRIVMELFADVTPRTAENFRALCTGEKGIGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSXFADENFVKKHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFRSVVEGMDVVKAIEKVGSSSG 818
            KV+FD+  G +  GRIV+ L+ +V P+T ENFRAL TGEKG G       YK S FHRVI  FM Q            +SIYG  FADENF  +HTGPGILSMANAG  TNGSQFF+ T  T WLDG+HVVF  V+EGMDVV AIE   +  G
Sbjct:   31 KVYFDIKQGDKDLGRIVLGLYGEVVPKTVENFRALATGEKGYG-------YKNSKFHRVIKDFMIQGGDFTRGDGTGGKSIYGERFADENFKLRHTGPGILSMANAGRDTNGSQFFITTVTTSWLDGRHVVFGKVIEGMDVVTAIETTKTLPG 176          
BLAST of FC929037 vs. ExPASy Swiss-Prot
Match: PPIG_RAT (Peptidyl-prolyl cis-trans isomerase G OS=Rattus norvegicus GN=Ppig PE=1 SV=2)

HSP 1 Score: 167.933 bits (424), Expect = 6.109e-41
Identity = 84/152 (55.26%), Postives = 98/152 (64.47%), Query Frame = 3
Query:  345 KMPNPKVFFDMTVGGQPAGRIVMELFADVTPRTAENFRALCTGEKGIGKSG-KPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSXFADENFVKKHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFRSVVEGMDVVKAIE 797
            K+  P+ FFD+ +  QPAGR+V ELF+DV P+T ENFR LCTGEKG GKS  KPLHYK   FHRV+  FM Q            ESIYG  F DE+F  KH    +LSMAN G  TNGSQFF+ T  T  LDG HVVF  V+ G +VV+ IE
Sbjct:    4 KVQRPRCFFDIAINNQPAGRVVFELFSDVCPKTCENFRCLCTGEKGTGKSTQKPLHYKSCLFHRVVKDFMVQGGDFSEGNGRGGESIYGGFFEDESFAVKHNKEFLLSMANRGKDTNGSQFFITTKPTPHLDGHHVVFGQVISGQEVVREIE 155          
BLAST of FC929037 vs. ExPASy Swiss-Prot
Match: PPIG_MOUSE (Peptidyl-prolyl cis-trans isomerase G OS=Mus musculus GN=Ppig PE=1 SV=1)

HSP 1 Score: 167.933 bits (424), Expect = 6.109e-41
Identity = 84/152 (55.26%), Postives = 98/152 (64.47%), Query Frame = 3
Query:  345 KMPNPKVFFDMTVGGQPAGRIVMELFADVTPRTAENFRALCTGEKGIGKSG-KPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSXFADENFVKKHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFRSVVEGMDVVKAIE 797
            K+  P+ FFD+ +  QPAGR+V ELF+DV P+T ENFR LCTGEKG GKS  KPLHYK   FHRV+  FM Q            ESIYG  F DE+F  KH    +LSMAN G  TNGSQFF+ T  T  LDG HVVF  V+ G +VV+ IE
Sbjct:    4 KVQRPRCFFDIAINNQPAGRVVFELFSDVCPKTCENFRCLCTGEKGTGKSTQKPLHYKSCLFHRVVKDFMVQGGDFSEGNGRGGESIYGGFFEDESFAVKHNKEFLLSMANRGKDTNGSQFFITTKPTPHLDGHHVVFGQVISGQEVVREIE 155          
BLAST of FC929037 vs. ExPASy Swiss-Prot
Match: PPIG_HUMAN (Peptidyl-prolyl cis-trans isomerase G OS=Homo sapiens GN=PPIG PE=1 SV=2)

HSP 1 Score: 167.933 bits (424), Expect = 6.109e-41
Identity = 84/152 (55.26%), Postives = 98/152 (64.47%), Query Frame = 3
Query:  345 KMPNPKVFFDMTVGGQPAGRIVMELFADVTPRTAENFRALCTGEKGIGKSG-KPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSXFADENFVKKHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFRSVVEGMDVVKAIE 797
            K+  P+ FFD+ +  QPAGR+V ELF+DV P+T ENFR LCTGEKG GKS  KPLHYK   FHRV+  FM Q            ESIYG  F DE+F  KH    +LSMAN G  TNGSQFF+ T  T  LDG HVVF  V+ G +VV+ IE
Sbjct:    4 KVQRPRCFFDIAINNQPAGRVVFELFSDVCPKTCENFRCLCTGEKGTGKSTQKPLHYKSCLFHRVVKDFMVQGGDFSEGNGRGGESIYGGFFEDESFAVKHNKEFLLSMANRGKDTNGSQFFITTKPTPHLDGHHVVFGQVISGQEVVREIE 155          
BLAST of FC929037 vs. ExPASy Swiss-Prot
Match: CYP11_CAEEL (Peptidyl-prolyl cis-trans isomerase 11 OS=Caenorhabditis elegans GN=cyn-11 PE=2 SV=1)

HSP 1 Score: 166.777 bits (421), Expect = 1.361e-40
Identity = 88/150 (58.67%), Postives = 99/150 (66.00%), Query Frame = 3
Query:  354 NPKVFFDMTVGGQPAGRIVMELFADVTPRTAENFRALCTGEKGIGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSXFADENFVKKHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFRSVVEGMDVVKAIEKV 803
            NP VF ++T GG P G IV+ELFADVTPRTAENFR  CTGE    K G P  YK  +FHRVI  FM Q             SIYGS F DENF  KH GPG+LSMANAG  TNG QFF+  AKT++LD KHVVF  V++GM  V+ IE V
Sbjct:   16 NPIVFLEVTAGGAPIGTIVIELFADVTPRTAENFRQFCTGE--YKKDGVPNGYKNCTFHRVIKDFMIQGGDFCNGDGTGLMSIYGSKFRDENFELKHIGPGMLSMANAGSDTNGCQFFITCAKTDFLDNKHVVFGRVLDGMLTVRKIENV 163          
BLAST of FC929037 vs. ExPASy Swiss-Prot
Match: PPID_KLULA (Peptidyl-prolyl cis-trans isomerase D OS=Kluyveromyces lactis GN=CPR6 PE=3 SV=1)

HSP 1 Score: 166.007 bits (419), Expect = 2.322e-40
Identity = 84/149 (56.38%), Postives = 97/149 (65.10%), Query Frame = 3
Query:  357 PKVFFDMTVGGQPAGRIVMELFADVTPRTAENFRALCTGEKGIGKSGK--PLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSXFADENFVKKHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFRSVVEGMDVVKAIE 797
            PK FFD+++GG+PAGRIV EL++DV P+TAENF  LC G  G  KS    PL YKGS FHRVI  FMCQ            ESIYG  F DENF  KH  P +LSMANAG  TNGSQ F+    T  LDGKHVVF  V++G  +V+ IE
Sbjct:    6 PKTFFDISIGGKPAGRIVFELYSDVVPKTAENFLKLCEGNSGFAKSKPDIPLSYKGSIFHRVIKSFMCQFGDFTNFNGTGGESIYGEKFEDENFTLKHDKPFLLSMANAGANTNGSQCFITCVPTPHLDGKHVVFGEVIQGKRLVRTIE 154          
BLAST of FC929037 vs. ExPASy Swiss-Prot
Match: PPID_CANGA (Peptidyl-prolyl cis-trans isomerase D OS=Candida glabrata GN=CPR6 PE=3 SV=1)

HSP 1 Score: 165.236 bits (417), Expect = 3.960e-40
Identity = 86/159 (54.09%), Postives = 100/159 (62.89%), Query Frame = 3
Query:  348 MPNPKVFFDMTVGGQPAGRIVMELFADVTPRTAENFRALCTGEKGIGKSGK--PLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSXFADENFVKKHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFRSVVEGMDVVKAIEKVGSSSG 818
            M  PK +FD+++GG P GRIV EL+ DV P+TAENF  LC G+ G+ KS    PL YKGS FHRVI  FM Q            ESIYG  F DENF  KH  P +LSMANAGP TNGSQ F+    T  LDGKHVVF  V+EG  +V+ IEK  +  G
Sbjct:    1 MTRPKAYFDISIGGTPKGRIVFELYKDVVPKTAENFLKLCEGKSGMAKSKPDVPLSYKGSIFHRVIKDFMIQFGDFTNFDGTGGESIYGEKFEDENFEIKHDKPFLLSMANAGPNTNGSQAFITCVPTPHLDGKHVVFGEVIEGKRLVRLIEKQQTEDG 159          
BLAST of FC929037 vs. ExPASy Swiss-Prot
Match: PPID_CANAL (Peptidyl-prolyl cis-trans isomerase D OS=Candida albicans GN=CPR6 PE=3 SV=2)

HSP 1 Score: 165.236 bits (417), Expect = 3.960e-40
Identity = 83/150 (55.33%), Postives = 101/150 (67.33%), Query Frame = 3
Query:  363 VFFDMTVGGQPAGRIVMELFADVTPRTAENFRALCTGEKGIG-KSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXX---ESIYGSXFADENFVKKHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFRSVVEGMDVVKAIEK 800
            V+FD++  G+P GR+V +L+ DV P+TA NFR+LCTG+KGI  KSGKPL YK S FHRVI  FMCQ               ESIYG  F DENF   H  P +LSMAN+GP TNGSQFF+ T  T  LDGKHVVF  V+EG  +V+ +E+
Sbjct:    6 VYFDISCNGKPKGRVVFKLYDDVVPKTAANFRSLCTGDKGISPKSGKPLSYKDSIFHRVIKDFMCQGGDFTAPSDHLGTGGESIYGEKFEDENFKLNHNKPFLLSMANSGPNTNGSQFFITTVPTPHLDGKHVVFGEVIEGKSIVRQLER 155          
The following BLAST results are available for this feature:
BLAST of FC929037 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 227
Match NameE-valueIdentityDescription
PPIA_STRCH1.608e-4157.23Peptidyl-prolyl cis-trans isomerase A OS=Streptomy... [more]
CYPH_UROFA1.608e-4157.05Peptidyl-prolyl cis-trans isomerase OS=Uromyces fa... [more]
PPIB_ORPSP3.582e-4156.86Peptidyl-prolyl cis-trans isomerase B OS=Orpinomyc... [more]
PPIG_RAT6.109e-4155.26Peptidyl-prolyl cis-trans isomerase G OS=Rattus no... [more]
PPIG_MOUSE6.109e-4155.26Peptidyl-prolyl cis-trans isomerase G OS=Mus muscu... [more]
PPIG_HUMAN6.109e-4155.26Peptidyl-prolyl cis-trans isomerase G OS=Homo sapi... [more]
CYP11_CAEEL1.361e-4058.67Peptidyl-prolyl cis-trans isomerase 11 OS=Caenorha... [more]
PPID_KLULA2.322e-4056.38Peptidyl-prolyl cis-trans isomerase D OS=Kluyverom... [more]
PPID_CANGA3.960e-4054.09Peptidyl-prolyl cis-trans isomerase D OS=Candida g... [more]
PPID_CANAL3.960e-4055.33Peptidyl-prolyl cis-trans isomerase D OS=Candida a... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAH1DC07RM2 PhII-IIIV1 Citrus clementina cDNA clone KN0AAH1DC07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC929037 ID=FC929037; Name=FC929037; organism=Citrus clementina; type=EST; length=830bp
GGCACGAGGTTGCTGGCGACGGCAAGGAGAATGGCCTCATTAGCAACCAC
TTCAGAGTCCAGGCGGTACTGCTGGCCTAACATGTAATGCCCCACGTAGT
CTGCACATTTTTCGGGAACAGTCGCCCATCCTATAACGTTATTAGTTTCC
ACTCCGAGTCGCCAACTCAGGCAGGACAAGCCGGGCACATCGTTGTTCCG
GGAACCGGCTTTCGGTCGGAGAAGATGAATCTGATGGGGGATGTCCATGC
TAAATCCATGGGATGTTGCTGCCTCGTGCCGAATTCGGCACGAGGATCAG
AAGTCCGTGTTTAGTTTGTTTTTTTCTCTCCAATCAACCAATCAAAAATG
CCAAACCCCAAAGTGTTCTTCGACATGACCGTCGGCGGTCAGCCCGCCGG
CAGGATCGTGATGGAGCTCTTCGCCGATGTCACCCCCCGAACCGCCGAGA
ACTTCCGCGCCCTCTGCACCGGCGAGAAAGGCATCGGCAAGTCCGGCAAG
CCACTCCACTACAAGGGCTCGTCCTTCCACCGTGTGATCCCCGGATTCAT
GTGCCAGGGGGGAGACTTCACCGCCGGAAACGGAACCGGAGGCGAATCAA
TCTACGGCTCANAATTCGCCGATGAGAACTTCGTGAAGAAGCACACCGGC
CCCGGAATCCTCTCCATGGCGAATGCCGGACCCGGAACCAACGGATCTCA
GTTCTTCGTCTGTACGGCCAAGACCGAGTGGCTCGATGGGAAGCACGTTG
TGTTTCGGTCAGTCGTCGAAGGAATGGACGTCGTCAAGGCCATCGAGAAA
GTGGGGTCCAGCTCCGGAAGGACCACAAGC
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