FC929037

Overview
NameFC929037
Unique NameFC929037
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length830
Libraries
Library NameType
PhII-IIIV1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC929037 vs. ExPASy Swiss-Prot
Match: PPIB_CHICK (Peptidyl-prolyl cis-trans isomerase B OS=Gallus gallus GN=PPIB PE=2 SV=1)

HSP 1 Score: 165.236 bits (417), Expect = 3.960e-40
Identity = 85/152 (55.92%), Postives = 98/152 (64.47%), Query Frame = 3
Query:  360 KVFFDMTVGGQPAGRIVMELFADVTPRTAENFRALCTGEKGIGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSXFADENFVKKHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFRSVVEGMDVVKAIEKVGSSS 815
            KVFFD+ VG + AGR+V+ LF    P+T ENF AL TGEKG G       +KGS FHRVI  FM Q            +SIYG  F DENF  KH GPG +SMANAG  TNGSQFF+ T KT WLDGKHVVF  V+EGMDVV+ +E   + S
Sbjct:   36 KVFFDLRVGEEDAGRVVIGLFGKTVPKTVENFVALATGEKGFG-------FKGSKFHRVIKDFMIQGGDFTRGDGTGGKSIYGDRFPDENFKLKHYGPGWVSMANAGKDTNGSQFFITTVKTAWLDGKHVVFGKVLEGMDVVRKVENTKTDS 180          
BLAST of FC929037 vs. ExPASy Swiss-Prot
Match: PPIB_ARTBE (Peptidyl-prolyl cis-trans isomerase B OS=Arthroderma benhamiae GN=CPR2 PE=2 SV=1)

HSP 1 Score: 164.466 bits (415), Expect = 6.755e-40
Identity = 88/165 (53.33%), Postives = 105/165 (63.64%), Query Frame = 3
Query:  315 FVFFSPINQSKMPN--PKVFFDMTVGGQPAGRIVMELFADVTPRTAENFRALCTGEKGIGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSXFADENFVKKHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFRSVVEGMDVVKAIEKV 803
            F+F     ++K P    KV+FD+   GQP GRIVM L+    P+TAENFRAL TGEKG G       Y+GS+FHRVI  FM Q            +SIYG+ F DENF  +HT  G+LSMANAG  TNGSQFF+ TA T WLDGKHVVF  V+EG D+V  I+ V
Sbjct:   19 FLFMGQTVEAKGPKITSKVYFDIEHDGQPLGRIVMGLYGKTVPKTAENFRALATGEKGFG-------YEGSTFHRVIKDFMIQGGDFTNGDGTGGKSIYGNKFEDENFKLRHTKKGVLSMANAGKDTNGSQFFITTAITAWLDGKHVVFGEVLEGYDIVDKIQVV 176          
BLAST of FC929037 vs. ExPASy Swiss-Prot
Match: CYP1_BRUMA (Peptidyl-prolyl cis-trans isomerase 1 OS=Brugia malayi GN=CYP-1 PE=1 SV=1)

HSP 1 Score: 163.696 bits (413), Expect = 1.152e-39
Identity = 86/159 (54.09%), Postives = 100/159 (62.89%), Query Frame = 3
Query:  342 SKMPNPKVFFDMTVGGQPAGRIVMELFADVTPRTAENFRALCTGEKGIGK-SGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSXFADENFVKKHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFRSVVEGMDVVKAIEKVGSSS 815
            SK    +VF D+T+ G  AGRIVMEL+ D+ PRT  NF  LCTG  G GK SGKPLHYKGS+FHRVI  FM Q            ESIYG  F DE FV KH  P ++SMAN GP TNGSQFF+ T     L+  HVVF  VV G +VV  IE + ++S
Sbjct:    2 SKKDRRRVFLDVTIDGNLAGRIVMELYNDIAPRTCNNFLMLCTGMAGTGKISGKPLHYKGSTFHRVIKNFMIQGGDFTKGDGTGGESIYGGMFDDEEFVMKHDEPFVVSMANKGPNTNGSQFFITTTPAPHLNNIHVVFGKVVSGQEVVTKIEYLKTNS 160          
BLAST of FC929037 vs. ExPASy Swiss-Prot
Match: PPID_YEAST (Peptidyl-prolyl cis-trans isomerase CPR6 OS=Saccharomyces cerevisiae GN=CPR6 PE=1 SV=1)

HSP 1 Score: 163.31 bits (412), Expect = 1.505e-39
Identity = 82/152 (53.95%), Postives = 97/152 (63.82%), Query Frame = 3
Query:  348 MPNPKVFFDMTVGGQPAGRIVMELFADVTPRTAENFRALCTGEKGIGKSGK--PLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSXFADENFVKKHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFRSVVEGMDVVKAIE 797
            M  PK FFD+++GG+P GRIV EL+ D+ P+TAENF  LC G  G+ K+    PL YKGS FHRVI  FMCQ            ESIY   F DENF  KH  P +LSMANAGP TNGSQ F+    T  LDGKHVVF  V++G  +V+ IE
Sbjct:    1 MTRPKTFFDISIGGKPQGRIVFELYNDIVPKTAENFLKLCEGNAGMAKTKPDVPLSYKGSIFHRVIKDFMCQFGDFTNFNGTGGESIYDEKFEDENFTVKHDKPFLLSMANAGPNTNGSQAFITCVPTPHLDGKHVVFGEVIQGKRIVRLIE 152          
BLAST of FC929037 vs. ExPASy Swiss-Prot
Match: PPIB_ASPFU (Peptidyl-prolyl cis-trans isomerase B OS=Aspergillus fumigatus GN=cpr2 PE=3 SV=1)

HSP 1 Score: 162.925 bits (411), Expect = 1.965e-39
Identity = 84/153 (54.90%), Postives = 99/153 (64.71%), Query Frame = 3
Query:  360 KVFFDMTVGGQPAGRIVMELFADVTPRTAENFRALCTGEKGIGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSXFADENFVKKHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFRSVVEGMDVVKAIEKVGSSSG 818
            KVFFD+  G +P GRIV+ L+    P+TAENFRAL TGEKG G       Y+GS+FHRVI  FM Q            +SIYG  FADENF  +HT  G+LSMANAG  TNGSQFF+ T  T WLDG+HVVF  V+EG +VV+ IE V    G
Sbjct:   37 KVFFDIEHGDKPLGRIVLGLYGKTVPKTAENFRALATGEKGFG-------YEGSTFHRVIKSFMIQGGDFTRGDGTGGKSIYGEKFADENFKLRHTRKGLLSMANAGKDTNGSQFFITTVPTPWLDGRHVVFGEVLEGYEVVEQIENVPKGPG 182          
BLAST of FC929037 vs. ExPASy Swiss-Prot
Match: CYPH_NEUCR (Peptidyl-prolyl cis-trans isomerase, mitochondrial OS=Neurospora crassa GN=NCU00726 PE=1 SV=1)

HSP 1 Score: 162.925 bits (411), Expect = 1.965e-39
Identity = 90/169 (53.25%), Postives = 101/169 (59.76%), Query Frame = 3
Query:  360 KVFFDMTVGGQ--------------PAGRIVMELFADVTPRTAENFRALCTGEKGIGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSXFADENFVKKHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFRSVV--EGMDVVKAIEKVGSSSG 818
            KVFFD+   G                +GRI   L+ DV P+TA NF+ LCTG+ G G       YKGSSFHR+IP FM Q            +SIYG  FADENF KKH  PG+LSMANAGP TNGSQFFV T  T WLDG+HVVF  V   E M VVKA+E  GSSSG
Sbjct:   46 KVFFDLEWEGPVLGPNNKPTSEIKAQSGRINFTLYDDVVPKTARNFKELCTGQNGFG-------YKGSSFHRIIPEFMLQGGDFTRGNGTGGKSIYGEKFADENFAKKHVRPGLLSMANAGPNTNGSQFFVTTVPTSWLDGRHVVFGEVADDESMKVVKALEATGSSSG 207          
BLAST of FC929037 vs. ExPASy Swiss-Prot
Match: CYPH_ENCCU (Peptidyl-prolyl cis-trans isomerase OS=Encephalitozoon cuniculi GN=CPR1 PE=1 SV=1)

HSP 1 Score: 162.925 bits (411), Expect = 1.965e-39
Identity = 86/160 (53.75%), Postives = 100/160 (62.50%), Query Frame = 3
Query:  342 SKMPNPKVFFDMTVGGQPAGRIVMELFADVTPRTAENFRALCTGEKGIGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSXFADENFVKKHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFRSVVEGMDVVKAIEKVGSSSGR 821
            +K  +  V+FD+    +  GRIVM+L  D+ P+TA+NFR LC   KG G       YKGS+FHR+IPGFM Q             SIYG  F DENF  KHT  GILSMAN G  TNGSQFF+   KT+WLD KHVVF  VVEGMDVV  I K GS SG+
Sbjct:    2 AKEASGNVYFDVYANEESLGRIVMKLEDDIVPKTAKNFRTLCERPKGEG-------YKGSTFHRIIPGFMVQGGDYTAHNGTGGRSIYGEKFPDENFELKHTKEGILSMANCGAHTNGSQFFITLGKTQWLDEKHVVFGEVVEGMDVVHKIAKYGSESGQ 154          
BLAST of FC929037 vs. ExPASy Swiss-Prot
Match: PPIB_YARLI (Peptidyl-prolyl cis-trans isomerase B OS=Yarrowia lipolytica GN=CPR2 PE=3 SV=1)

HSP 1 Score: 161.77 bits (408), Expect = 4.378e-39
Identity = 85/146 (58.22%), Postives = 94/146 (64.38%), Query Frame = 3
Query:  360 KVFFDMTVGGQPAGRIVMELFADVTPRTAENFRALCTGEKGIGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSXFADENFVKKHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFRSVVEGMDVVKAIE 797
            KV+FD+  G +  G+IVM L+ DV P+T ENFRALCTGE G G       YKGS FHRVI  FM Q            ESIYG  F DENF  KHT P  LSMANAG  TNGSQFF+ T  T WLDGKHVVF  V+EG D+V AIE
Sbjct:   33 KVYFDIKQGEESLGKIVMGLYGDVVPKTVENFRALCTGETGKG-------YKGSKFHRVIKNFMIQGGDFTRGDGTGGESIYGRKFPDENFQLKHTKPYKLSMANAGRDTNGSQFFITTVVTSWLDGKHVVFGEVLEGQDIVDAIE 171          
BLAST of FC929037 vs. ExPASy Swiss-Prot
Match: PPIB2_RHIOR (Peptidyl-prolyl cis-trans isomerase B2 OS=Rhizopus oryzae GN=cyp9 PE=3 SV=1)

HSP 1 Score: 161.77 bits (408), Expect = 4.378e-39
Identity = 84/162 (51.85%), Postives = 102/162 (62.96%), Query Frame = 3
Query:  315 FVFFSPINQSKMPNPKVFFDMTVGGQPAGRIVMELFADVTPRTAENFRALCTGEKGIGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSXFADENFVKKHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFRSVVEGMDVVKAIEK 800
            F F S  ++  +   K++FD+  G +  GRIV  L+    P+TAENF+ L TG+ G G       YKGS+FHRVI  FM Q            +SIYGS F DENF  +HT PG+LSMANAGP +NGSQFF+ T  T WLDGKHVVF  V+EGMDVV  IEK
Sbjct:   20 FRFVSAESKGPVITDKIYFDIKQGEESLGRIVFGLYGKTVPKTAENFKQLATGQNGYG-------YKGSTFHRVIDQFMIQGGDFTNHDGTGGKSIYGSRFPDENFKLRHTVPGLLSMANAGPDSNGSQFFITTVVTSWLDGKHVVFGKVLEGMDVVTKIEK 174          
BLAST of FC929037 vs. ExPASy Swiss-Prot
Match: PPIB_RAT (Peptidyl-prolyl cis-trans isomerase B OS=Rattus norvegicus GN=Ppib PE=2 SV=3)

HSP 1 Score: 161.384 bits (407), Expect = 5.718e-39
Identity = 81/152 (53.29%), Postives = 94/152 (61.84%), Query Frame = 3
Query:  360 KVFFDMTVGGQPAGRIVMELFADVTPRTAENFRALCTGEKGIGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSXFADENFVKKHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFRSVVEGMDVVKAIEKVGSSS 815
            KV+FD  +G +P GR+   LF    P+T +NF AL TGEKG G       YK S FHRVI  FM Q            +SIYG  F DENF  KH GPG +SMANAG  TNGSQFF+ T KT WLDGKHVVF  V+EGMDVV+ +E   + S
Sbjct:   45 KVYFDFQIGDEPVGRVTFGLFGKTVPKTVDNFVALATGEKGFG-------YKNSKFHRVIKDFMIQGGDFTRGDGTGGKSIYGERFPDENFKLKHYGPGWVSMANAGKDTNGSQFFITTVKTSWLDGKHVVFGKVLEGMDVVRKVENTKTDS 189          
The following BLAST results are available for this feature:
BLAST of FC929037 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 227
Match NameE-valueIdentityDescription
PPIB_CHICK3.960e-4055.92Peptidyl-prolyl cis-trans isomerase B OS=Gallus ga... [more]
PPIB_ARTBE6.755e-4053.33Peptidyl-prolyl cis-trans isomerase B OS=Arthroder... [more]
CYP1_BRUMA1.152e-3954.09Peptidyl-prolyl cis-trans isomerase 1 OS=Brugia ma... [more]
PPID_YEAST1.505e-3953.95Peptidyl-prolyl cis-trans isomerase CPR6 OS=Saccha... [more]
PPIB_ASPFU1.965e-3954.90Peptidyl-prolyl cis-trans isomerase B OS=Aspergill... [more]
CYPH_NEUCR1.965e-3953.25Peptidyl-prolyl cis-trans isomerase, mitochondrial... [more]
CYPH_ENCCU1.965e-3953.75Peptidyl-prolyl cis-trans isomerase OS=Encephalito... [more]
PPIB_YARLI4.378e-3958.22Peptidyl-prolyl cis-trans isomerase B OS=Yarrowia ... [more]
PPIB2_RHIOR4.378e-3951.85Peptidyl-prolyl cis-trans isomerase B2 OS=Rhizopus... [more]
PPIB_RAT5.718e-3953.29Peptidyl-prolyl cis-trans isomerase B OS=Rattus no... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAH1DC07RM2 PhII-IIIV1 Citrus clementina cDNA clone KN0AAH1DC07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC929037 ID=FC929037; Name=FC929037; organism=Citrus clementina; type=EST; length=830bp
GGCACGAGGTTGCTGGCGACGGCAAGGAGAATGGCCTCATTAGCAACCAC
TTCAGAGTCCAGGCGGTACTGCTGGCCTAACATGTAATGCCCCACGTAGT
CTGCACATTTTTCGGGAACAGTCGCCCATCCTATAACGTTATTAGTTTCC
ACTCCGAGTCGCCAACTCAGGCAGGACAAGCCGGGCACATCGTTGTTCCG
GGAACCGGCTTTCGGTCGGAGAAGATGAATCTGATGGGGGATGTCCATGC
TAAATCCATGGGATGTTGCTGCCTCGTGCCGAATTCGGCACGAGGATCAG
AAGTCCGTGTTTAGTTTGTTTTTTTCTCTCCAATCAACCAATCAAAAATG
CCAAACCCCAAAGTGTTCTTCGACATGACCGTCGGCGGTCAGCCCGCCGG
CAGGATCGTGATGGAGCTCTTCGCCGATGTCACCCCCCGAACCGCCGAGA
ACTTCCGCGCCCTCTGCACCGGCGAGAAAGGCATCGGCAAGTCCGGCAAG
CCACTCCACTACAAGGGCTCGTCCTTCCACCGTGTGATCCCCGGATTCAT
GTGCCAGGGGGGAGACTTCACCGCCGGAAACGGAACCGGAGGCGAATCAA
TCTACGGCTCANAATTCGCCGATGAGAACTTCGTGAAGAAGCACACCGGC
CCCGGAATCCTCTCCATGGCGAATGCCGGACCCGGAACCAACGGATCTCA
GTTCTTCGTCTGTACGGCCAAGACCGAGTGGCTCGATGGGAAGCACGTTG
TGTTTCGGTCAGTCGTCGAAGGAATGGACGTCGTCAAGGCCATCGAGAAA
GTGGGGTCCAGCTCCGGAAGGACCACAAGC
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