FC929037

Overview
NameFC929037
Unique NameFC929037
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length830
Libraries
Library NameType
PhII-IIIV1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC929037 vs. ExPASy Swiss-Prot
Match: PPIB_GIBZE (Peptidyl-prolyl cis-trans isomerase B OS=Gibberella zeae GN=CPR2 PE=3 SV=1)

HSP 1 Score: 160.999 bits (406), Expect = 7.468e-39
Identity = 81/146 (55.48%), Postives = 95/146 (65.07%), Query Frame = 3
Query:  360 KVFFDMTVGGQPAGRIVMELFADVTPRTAENFRALCTGEKGIGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSXFADENFVKKHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFRSVVEGMDVVKAIE 797
            KV+FD+T G QP GR+VM L+    P T ENFRAL TGEKG G       Y+GS+FHRVI  FM Q            +SIYG  F DENF  KHT  G+LSMANAG  TNGSQFF+ T  T WLDGKHVVF  V+EG ++++ IE
Sbjct:   36 KVYFDITQGDQPLGRVVMGLYGKTVPETTENFRALATGEKGFG-------YEGSAFHRVIKNFMIQGGDFTKGDGTGGKSIYGDRFKDENFKLKHTKKGLLSMANAGRDTNGSQFFITTVVTSWLDGKHVVFGEVLEGYEIIEKIE 174          
BLAST of FC929037 vs. ExPASy Swiss-Prot
Match: PPID_CRYNE (Peptidyl-prolyl cis-trans isomerase D OS=Cryptococcus neoformans GN=CPR6 PE=3 SV=1)

HSP 1 Score: 160.614 bits (405), Expect = 9.754e-39
Identity = 82/158 (51.90%), Postives = 100/158 (63.29%), Query Frame = 3
Query:  348 MPNPKVFFDMTVGGQPAGRIVMELFADVTPRTAENFRALCTGEKGIGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSXFADENFVKKHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFRSVVEGMDVVKAIEKVGSSSGR 821
            M N   +FD+T+  +PAGR+  ELF DV P+TA NF+ LC G+K   ++G  L Y GSSFHR I GFM Q            ESIYG  F DENF  KH  P +LSMANAGPGTNGSQFF+ T  T  LDGKHVVF  V+    +V+ IE + ++S R
Sbjct:    1 MSNTIAYFDITIANEPAGRLTFELFDDVVPKTANNFKHLCIGDK-TNEAGVKLAYAGSSFHRCIKGFMLQGGDFTRGDGTGGESIYGEKFEDENFELKHDKPMLLSMANAGPGTNGSQFFITTVPTPHLDGKHVVFGRVIYNRSLVRRIENIPTTSDR 157          
BLAST of FC929037 vs. ExPASy Swiss-Prot
Match: PPIB_MOUSE (Peptidyl-prolyl cis-trans isomerase B OS=Mus musculus GN=Ppib PE=2 SV=2)

HSP 1 Score: 160.614 bits (405), Expect = 9.754e-39
Identity = 81/152 (53.29%), Postives = 95/152 (62.50%), Query Frame = 3
Query:  360 KVFFDMTVGGQPAGRIVMELFADVTPRTAENFRALCTGEKGIGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSXFADENFVKKHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFRSVVEGMDVVKAIEKVGSSS 815
            KV+FD+ +G +  GR+V  LF    P+T +NF AL TGEKG G       YK S FHRVI  FM Q            +SIYG  F DENF  KH GPG +SMANAG  TNGSQFF+ T KT WLDGKHVVF  V+EGMDVV+ +E   + S
Sbjct:   45 KVYFDLQIGDESVGRVVFGLFGKTVPKTVDNFVALATGEKGFG-------YKNSKFHRVIKDFMIQGGDFTRGDGTGGKSIYGERFPDENFKLKHYGPGWVSMANAGKDTNGSQFFITTVKTSWLDGKHVVFGKVLEGMDVVRKVESTKTDS 189          
BLAST of FC929037 vs. ExPASy Swiss-Prot
Match: PPIB_SCHPO (Peptidyl-prolyl cis-trans isomerase B OS=Schizosaccharomyces pombe GN=cyp4 PE=2 SV=1)

HSP 1 Score: 160.229 bits (404), Expect = 1.274e-38
Identity = 84/163 (51.53%), Postives = 101/163 (61.96%), Query Frame = 3
Query:  318 VFFSPINQSKMPN--PKVFFDMTVGGQPAGRIVMELFADVTPRTAENFRALCTGEKGIGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSXFADENFVKKHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFRSVVEGMDVVKAIEK 800
            +FF  I+ ++ P     V+FD+  G +  GR+ + LF    P+TAENFRAL TGEKG G       Y+GS FHRVIP FM Q            +SIYGS F DENF   H  PG+LSMANAGP +NGSQFF+ T KT WLDG HVVF  V+ G D+VK I K
Sbjct:   12 LFFGLISANRGPKVTDTVYFDLQQGDEFLGRVTIGLFGKTVPKTAENFRALATGEKGFG-------YEGSIFHRVIPNFMIQGGDITKGDGTGGKSIYGSRFPDENFKLSHQRPGLLSMANAGPDSNGSQFFITTVKTPWLDGHHVVFGEVLSGYDIVKKISK 167          
BLAST of FC929037 vs. ExPASy Swiss-Prot
Match: PPIB1_RHIOR (Peptidyl-prolyl cis-trans isomerase B1 OS=Rhizopus oryzae GN=cyp8 PE=3 SV=1)

HSP 1 Score: 160.229 bits (404), Expect = 1.274e-38
Identity = 84/167 (50.30%), Postives = 103/167 (61.68%), Query Frame = 3
Query:  315 FVFFSPINQSKMPNPKVFFDMTVGGQPAGRIVMELFADVTPRTAENFRALCTGEKGIGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSXFADENFVKKHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFRSVVEGMDVVKAIEKVGSSS 815
            F F S   +  +   K++FD+  G +  GRIV+ L+    P+TAENF+ L TGE G G       YKGS+FHRVI  FM Q            +SIYG+ FADENF  +H+ PG+LSMANAG  TNGSQFF+ T  T WLDGKHVVF  V+EGMDVV  IE   + S
Sbjct:   20 FSFVSAEGRGPVITDKIYFDIKQGDESLGRIVLGLYGKTVPKTAENFKQLATGENGYG-------YKGSTFHRVIKKFMIQGGDFTNHDGTGGKSIYGNRFADENFKLRHSTPGLLSMANAGRDTNGSQFFITTVVTPWLDGKHVVFGRVLEGMDVVTKIENTPTGS 179          
BLAST of FC929037 vs. ExPASy Swiss-Prot
Match: PPIB_NEUCR (Peptidyl-prolyl cis-trans isomerase B OS=Neurospora crassa GN=cpr-2 PE=3 SV=3)

HSP 1 Score: 159.844 bits (403), Expect = 1.664e-38
Identity = 83/146 (56.85%), Postives = 96/146 (65.75%), Query Frame = 3
Query:  360 KVFFDMTVGGQPAGRIVMELFADVTPRTAENFRALCTGEKGIGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSXFADENFVKKHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFRSVVEGMDVVKAIE 797
            KV+FD+  G +P GRIVM L+    P+TAENFRAL TGEKG G       Y+GS+FHRVI  FM Q            +SIYG  F DENF  KH+  G+LSMANAG  TNGSQFF+ T  T WLDGKHVVF  V+EG DVV+ IE
Sbjct:   36 KVYFDIEQGDKPLGRIVMGLYGKTVPKTAENFRALATGEKGFG-------YEGSTFHRVIKQFMIQGGDFTKGDGTGGKSIYGDKFPDENFKLKHSKKGLLSMANAGKDTNGSQFFITTVITSWLDGKHVVFGEVLEGYDVVEKIE 174          
BLAST of FC929037 vs. ExPASy Swiss-Prot
Match: PPIB_ASPNG (Peptidyl-prolyl cis-trans isomerase B OS=Aspergillus niger GN=cypB PE=3 SV=1)

HSP 1 Score: 159.844 bits (403), Expect = 1.664e-38
Identity = 81/148 (54.73%), Postives = 97/148 (65.54%), Query Frame = 3
Query:  360 KVFFDMTVGGQPAGRIVMELFADVTPRTAENFRALCTGEKGIGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSXFADENFVKKHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFRSVVEGMDVVKAIEKV 803
            KVFFD+  G +P GR+V+ L+    P+TAENFRAL TGEKG G       Y+GS+FHRVI  FM Q            +SIYG  FADENF  +HT  G+LSMANAG  TNGSQFF+ T  T WLDG+HVVF  V+EG ++V  IE V
Sbjct:   36 KVFFDIEHGDKPLGRVVLGLYGKTVPKTAENFRALATGEKGFG-------YEGSTFHRVIKDFMIQGGDFTRGDGTGGKSIYGEKFADENFKLRHTRKGLLSMANAGKDTNGSQFFITTVPTPWLDGRHVVFGEVLEGYEIVAQIENV 176          
BLAST of FC929037 vs. ExPASy Swiss-Prot
Match: CYP6_CAEEL (Peptidyl-prolyl cis-trans isomerase 6 OS=Caenorhabditis elegans GN=cyn-6 PE=2 SV=1)

HSP 1 Score: 159.073 bits (401), Expect = 2.838e-38
Identity = 82/153 (53.59%), Postives = 96/153 (62.75%), Query Frame = 3
Query:  360 KVFFDMTVGGQPAGRIVMELFADVTPRTAENFRALCTGEKGIGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSXFADENFVKKHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFRSVVEGMDVVKAIEKVGSSSG 818
            KVFFDM +GG+P G+IV+ LF +V P+T +NF  L    +G G       Y GS FHRVI  FM Q             SIYG  F DENF  +H GPG LSMANAG  TNGSQFF+ TAKT WLDGKHVVF  ++EGMDVV+ IE     +G
Sbjct:   27 KVFFDMEIGGRPVGKIVIGLFGEVVPKTVKNFVELAQRAEGEG-------YVGSKFHRVIENFMIQGGDFTRGDGTGGRSIYGERFEDENFKLQHYGPGWLSMANAGEDTNGSQFFITTAKTSWLDGKHVVFGKILEGMDVVREIEATPKGAG 172          
BLAST of FC929037 vs. ExPASy Swiss-Prot
Match: PPIB_BOVIN (Peptidyl-prolyl cis-trans isomerase B OS=Bos taurus GN=PPIB PE=1 SV=4)

HSP 1 Score: 158.688 bits (400), Expect = 3.706e-38
Identity = 80/146 (54.79%), Postives = 94/146 (64.38%), Query Frame = 3
Query:  360 KVFFDMTVGGQPAGRIVMELFADVTPRTAENFRALCTGEKGIGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSXFADENFVKKHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFRSVVEGMDVVKAIE 797
            KV+FD+ +G +  GR+V+ LF    P+T +NF AL TGEKG G       YK S FHRVI  FM Q            +SIYG  F DENF  KH GPG +SMANAG  TNGSQFF+ T KT WLDGKHVVF  V+EGMDVV+ +E
Sbjct:   45 KVYFDLRIGDEDIGRVVIGLFGKTVPKTVDNFVALATGEKGFG-------YKDSKFHRVIKDFMIQGGDFTRGDGTGGKSIYGERFPDENFKLKHYGPGWVSMANAGKDTNGSQFFITTVKTAWLDGKHVVFGKVLEGMDVVRKVE 183          
BLAST of FC929037 vs. ExPASy Swiss-Prot
Match: PPIB_HUMAN (Peptidyl-prolyl cis-trans isomerase B OS=Homo sapiens GN=PPIB PE=1 SV=2)

HSP 1 Score: 158.303 bits (399), Expect = 4.841e-38
Identity = 79/152 (51.97%), Postives = 95/152 (62.50%), Query Frame = 3
Query:  360 KVFFDMTVGGQPAGRIVMELFADVTPRTAENFRALCTGEKGIGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSXFADENFVKKHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFRSVVEGMDVVKAIEKVGSSS 815
            KV+FD+ +G +  GR++  LF    P+T +NF AL TGEKG G       YK S FHRVI  FM Q            +SIYG  F DENF  KH GPG +SMANAG  TNGSQFF+ T KT WLDGKHVVF  V+EGM+VV+ +E   + S
Sbjct:   45 KVYFDLRIGDEDVGRVIFGLFGKTVPKTVDNFVALATGEKGFG-------YKNSKFHRVIKDFMIQGGDFTRGDGTGGKSIYGERFPDENFKLKHYGPGWVSMANAGKDTNGSQFFITTVKTAWLDGKHVVFGKVLEGMEVVRKVESTKTDS 189          
The following BLAST results are available for this feature:
BLAST of FC929037 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 227
Match NameE-valueIdentityDescription
PPIB_GIBZE7.468e-3955.48Peptidyl-prolyl cis-trans isomerase B OS=Gibberell... [more]
PPID_CRYNE9.754e-3951.90Peptidyl-prolyl cis-trans isomerase D OS=Cryptococ... [more]
PPIB_MOUSE9.754e-3953.29Peptidyl-prolyl cis-trans isomerase B OS=Mus muscu... [more]
PPIB_SCHPO1.274e-3851.53Peptidyl-prolyl cis-trans isomerase B OS=Schizosac... [more]
PPIB1_RHIOR1.274e-3850.30Peptidyl-prolyl cis-trans isomerase B1 OS=Rhizopus... [more]
PPIB_NEUCR1.664e-3856.85Peptidyl-prolyl cis-trans isomerase B OS=Neurospor... [more]
PPIB_ASPNG1.664e-3854.73Peptidyl-prolyl cis-trans isomerase B OS=Aspergill... [more]
CYP6_CAEEL2.838e-3853.59Peptidyl-prolyl cis-trans isomerase 6 OS=Caenorhab... [more]
PPIB_BOVIN3.706e-3854.79Peptidyl-prolyl cis-trans isomerase B OS=Bos tauru... [more]
PPIB_HUMAN4.841e-3851.97Peptidyl-prolyl cis-trans isomerase B OS=Homo sapi... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAH1DC07RM2 PhII-IIIV1 Citrus clementina cDNA clone KN0AAH1DC07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC929037 ID=FC929037; Name=FC929037; organism=Citrus clementina; type=EST; length=830bp
GGCACGAGGTTGCTGGCGACGGCAAGGAGAATGGCCTCATTAGCAACCAC
TTCAGAGTCCAGGCGGTACTGCTGGCCTAACATGTAATGCCCCACGTAGT
CTGCACATTTTTCGGGAACAGTCGCCCATCCTATAACGTTATTAGTTTCC
ACTCCGAGTCGCCAACTCAGGCAGGACAAGCCGGGCACATCGTTGTTCCG
GGAACCGGCTTTCGGTCGGAGAAGATGAATCTGATGGGGGATGTCCATGC
TAAATCCATGGGATGTTGCTGCCTCGTGCCGAATTCGGCACGAGGATCAG
AAGTCCGTGTTTAGTTTGTTTTTTTCTCTCCAATCAACCAATCAAAAATG
CCAAACCCCAAAGTGTTCTTCGACATGACCGTCGGCGGTCAGCCCGCCGG
CAGGATCGTGATGGAGCTCTTCGCCGATGTCACCCCCCGAACCGCCGAGA
ACTTCCGCGCCCTCTGCACCGGCGAGAAAGGCATCGGCAAGTCCGGCAAG
CCACTCCACTACAAGGGCTCGTCCTTCCACCGTGTGATCCCCGGATTCAT
GTGCCAGGGGGGAGACTTCACCGCCGGAAACGGAACCGGAGGCGAATCAA
TCTACGGCTCANAATTCGCCGATGAGAACTTCGTGAAGAAGCACACCGGC
CCCGGAATCCTCTCCATGGCGAATGCCGGACCCGGAACCAACGGATCTCA
GTTCTTCGTCTGTACGGCCAAGACCGAGTGGCTCGATGGGAAGCACGTTG
TGTTTCGGTCAGTCGTCGAAGGAATGGACGTCGTCAAGGCCATCGAGAAA
GTGGGGTCCAGCTCCGGAAGGACCACAAGC
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