FC929037

Overview
NameFC929037
Unique NameFC929037
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length830
Libraries
Library NameType
PhII-IIIV1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC929037 vs. ExPASy Swiss-Prot
Match: PPIA_SCHMA (Peptidyl-prolyl cis-trans isomerase OS=Schistosoma mansoni PE=1 SV=1)

HSP 1 Score: 158.303 bits (399), Expect = 4.841e-38
Identity = 84/154 (54.55%), Postives = 97/154 (62.99%), Query Frame = 3
Query:  360 KVFFDMTVGGQPAGRIVMELFADVTPRTAENFRALCTGEKGIGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSXFADENFVKKHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFRSVVEGMDVVKAIEKVGSSSGR 821
            K FFD+  G +  GRI+ ELF DV P T  NFR LCT +   G       YKGS FHR+IPGFMCQ            +SIYG+ F DENF  KH     LSMANAGP TNGSQFF+ T    WLDGKHVVF  VV G+DVVK +E +GS+SG+
Sbjct:    4 KAFFDIKAGDERLGRIIFELFNDV-PDTTRNFRELCTHKNNFG-------YKGSVFHRIIPGFMCQGGDFTNGDGTGGKSIYGNKFKDENFNHKHEAFS-LSMANAGPNTNGSQFFITTVPCSWLDGKHVVFGKVVSGIDVVKKMESLGSTSGK 148          
BLAST of FC929037 vs. ExPASy Swiss-Prot
Match: PPIB_ASPOR (Peptidyl-prolyl cis-trans isomerase B OS=Aspergillus oryzae GN=cpr2 PE=3 SV=1)

HSP 1 Score: 157.918 bits (398), Expect = 6.322e-38
Identity = 81/152 (53.29%), Postives = 98/152 (64.47%), Query Frame = 3
Query:  363 VFFDMTVGGQPAGRIVMELFADVTPRTAENFRALCTGEKGIGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSXFADENFVKKHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFRSVVEGMDVVKAIEKVGSSSG 818
            V+FD+  G +P GR+V+ L+    P+TAENFRAL TGEKG G       Y+GS+FHRVI  FM Q            +SIYG  F DENF  +HT  G+LSMANAG  TNGSQFF+ T  T WLDG+HVVF  V+EG +VV+AIE V    G
Sbjct:   22 VYFDIEHGNKPLGRVVLGLYGKTVPKTAENFRALATGEKGFG-------YEGSTFHRVIKEFMIQGGDFTRGDGTGGKSIYGEKFKDENFKIRHTKKGLLSMANAGKDTNGSQFFITTVATPWLDGRHVVFGEVLEGYEVVEAIENVPKVPG 166          
BLAST of FC929037 vs. ExPASy Swiss-Prot
Match: PPIB_SCHMA (Peptidyl-prolyl cis-trans isomerase B OS=Schistosoma mansoni GN=CYP PE=2 SV=1)

HSP 1 Score: 157.147 bits (396), Expect = 1.078e-37
Identity = 81/152 (53.29%), Postives = 96/152 (63.16%), Query Frame = 3
Query:  360 KVFFDMTVGGQPAGRIVMELFADVTPRTAENFRALCTGEKGIGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSXFADENFVKKHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFRSVVEGMDVVKAIEKVGSSS 815
            KVFFD+ V G+P  RI++ LF    P+T ENF+ L  G +   K G+   YKGS+FHRVI  FM Q             SIYG  F DENF  +H G G LSMANAGP TNGSQFF+ T KT WLDGKHVVF  VVEGM++V+ IE   + S
Sbjct:   33 KVFFDIEVDGKPLARIIIGLFGKTVPKTVENFKQLSIGTQL--KDGRTASYKGSTFHRVIKSFMIQGGDFTNHDGTGGFSIYGDRFPDENFKLRHVGAGWLSMANAGPDTNGSQFFITTVKTSWLDGKHVVFGKVVEGMNIVRQIESETTDS 182          
BLAST of FC929037 vs. ExPASy Swiss-Prot
Match: PPIB_EMENI (Peptidyl-prolyl cis-trans isomerase B OS=Emericella nidulans GN=cpr2 PE=3 SV=1)

HSP 1 Score: 157.147 bits (396), Expect = 1.078e-37
Identity = 84/161 (52.17%), Postives = 101/161 (62.73%), Query Frame = 3
Query:  333 INQSKMPNPK----VFFDMTVGGQPAGRIVMELFADVTPRTAENFRALCTGEKGIGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSXFADENFVKKHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFRSVVEGMDVVKAIEKV 803
            +N S+   PK    V+FD+  G +  GRIV+ L+    P TAENFRAL TGEKG G       Y+GS+FHRVI  FM Q            +SIYG+ F DENF  +HT  G+LSMANAG  TNGSQFF+ TA T WLDGKHVVF  V+EG D+V  I+ V
Sbjct:   22 VNASEPRGPKITNKVYFDIQHGDESLGRIVLGLYGKTVPETAENFRALATGEKGFG-------YEGSNFHRVIKDFMIQGGDFTRGDGTGGKSIYGAKFKDENFKLRHTKTGLLSMANAGKDTNGSQFFITTAVTPWLDGKHVVFGEVLEGYDIVDKIQNV 175          
BLAST of FC929037 vs. ExPASy Swiss-Prot
Match: PPIC_HUMAN (Peptidyl-prolyl cis-trans isomerase C OS=Homo sapiens GN=PPIC PE=1 SV=1)

HSP 1 Score: 155.221 bits (391), Expect = 4.098e-37
Identity = 82/146 (56.16%), Postives = 92/146 (63.01%), Query Frame = 3
Query:  360 KVFFDMTVGGQPAGRIVMELFADVTPRTAENFRALCTGEKGIGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSXFADENFVKKHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFRSVVEGMDVVKAIE 797
            KVFFD+ +G +  GRIV+ LF  V P+T ENF AL TGEKG G       YKGS FHRVI  FM Q             SIYG  F DENF  KH G G +SMANAGP TNGSQFF+   K  WLDGKHVVF  V++GM VV +IE
Sbjct:   39 KVFFDVRIGDKDVGRIVIGLFGKVVPKTVENFVALATGEKGYG-------YKGSKFHRVIKDFMIQGGDITTGDGTGGVSIYGETFPDENFKLKHYGIGWVSMANAGPDTNGSQFFITLTKPTWLDGKHVVFGKVIDGMTVVHSIE 177          
BLAST of FC929037 vs. ExPASy Swiss-Prot
Match: CYP5_CAEEL (Peptidyl-prolyl cis-trans isomerase 5 OS=Caenorhabditis elegans GN=cyn-5 PE=1 SV=2)

HSP 1 Score: 154.836 bits (390), Expect = 5.352e-37
Identity = 82/153 (53.59%), Postives = 93/153 (60.78%), Query Frame = 3
Query:  360 KVFFDMTVGGQPAGRIVMELFADVTPRTAENFRALCTGEKGIGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSXFADENFVKKHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFRSVVEGMDVVKAIEKVGSSSG 818
            KV+FDM +GG+P GRIV+ LF    P+TA NF  L    KG G       Y GS FHRVI  FM Q             SIYG  FADENF  KH G G LSMANAG  TNGSQFF+ T KT WLDG+HVVF  ++EGMDVV+ IE+     G
Sbjct:   30 KVYFDMEIGGKPIGRIVIGLFGKTVPKTATNFIELAKKPKGEG-------YPGSKFHRVIADFMIQGGDFTRGDGTGGRSIYGEKFADENFKLKHYGAGWLSMANAGADTNGSQFFITTVKTPWLDGRHVVFGKILEGMDVVRKIEQTEKLPG 175          
BLAST of FC929037 vs. ExPASy Swiss-Prot
Match: PPIC_MOUSE (Peptidyl-prolyl cis-trans isomerase C OS=Mus musculus GN=Ppic PE=1 SV=1)

HSP 1 Score: 154.451 bits (389), Expect = 6.990e-37
Identity = 82/146 (56.16%), Postives = 93/146 (63.70%), Query Frame = 3
Query:  360 KVFFDMTVGGQPAGRIVMELFADVTPRTAENFRALCTGEKGIGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSXFADENFVKKHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFRSVVEGMDVVKAIE 797
            KVFFD+ +G +  GRIV+ LF +V P+T ENF AL TGEKG G       YKGS FHRVI  FM Q             SIYG  F DENF  KH G G +SMANAGP TNGSQFF+   K  WLDGKHVVF  V++GM VV +IE
Sbjct:   39 KVFFDVRIGDKDVGRIVIGLFGNVVPKTVENFVALATGEKGYG-------YKGSIFHRVIKDFMIQGGDFTARDGTGGMSIYGETFPDENFKLKHYGIGWVSMANAGPDTNGSQFFITLTKPTWLDGKHVVFGKVLDGMTVVHSIE 177          
BLAST of FC929037 vs. ExPASy Swiss-Prot
Match: PPIB_SCHJA (Peptidyl-prolyl cis-trans isomerase B OS=Schistosoma japonicum PE=2 SV=1)

HSP 1 Score: 154.451 bits (389), Expect = 6.990e-37
Identity = 81/152 (53.29%), Postives = 94/152 (61.84%), Query Frame = 3
Query:  360 KVFFDMTVGGQPAGRIVMELFADVTPRTAENFRALCTGEKGIGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSXFADENFVKKHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFRSVVEGMDVVKAIEKVGSSS 815
            KVFFD+ V  QP GRI++ LF    P+T ENF+ L  G     K G+   YKGS+FHRVI  FM Q             SIYG  F DENF  KH G G LSMANAGP TNG+QFF+ T +  WLDGKHVVF  VVEGM VV+ IE + + S
Sbjct:   33 KVFFDIEVDEQPLGRIIIGLFGKTVPKTVENFKQLSIGTTL--KDGRTAAYKGSTFHRVIKSFMIQGGDFTNHDGTGGFSIYGERFPDENFKLKHVGAGWLSMANAGPNTNGAQFFITTTQNPWLDGKHVVFGKVVEGMSVVRQIENMQTDS 182          
BLAST of FC929037 vs. ExPASy Swiss-Prot
Match: PPIH_RHIOR (Peptidyl-prolyl cis-trans isomerase H OS=Rhizopus oryzae GN=cyp7 PE=3 SV=1)

HSP 1 Score: 154.066 bits (388), Expect = 9.129e-37
Identity = 78/157 (49.68%), Postives = 103/157 (65.61%), Query Frame = 3
Query:  342 SKMPNPKVFFDMTVGGQPAGRIVMELFADVTPRTAENFRALCTGEKGIGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSX-FADENFVKKHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFRSVVEGMDVVKAIEKVGS 809
            +++  P VFFD+++G  P GR+ MELF+D+ PRTAENFR LCTGE    ++G P  YK   FHRVI  FM Q              IYG   FADENF++KHTG G+LSMAN+GP +NG QFF+     ++LDGKHVVF  +V+G+  ++ IE V +
Sbjct:    6 NQVERPVVFFDISIGDVPVGRMKMELFSDIVPRTAENFRQLCTGE--YKRNGVPQGYKNCLFHRVIKDFMVQGGDFIKGDGTGAMCIYGGDRFADENFIEKHTGAGLLSMANSGPNSNGCQFFITCDACDFLDGKHVVFGRLVDGLLTLRKIENVAT 160          
BLAST of FC929037 vs. ExPASy Swiss-Prot
Match: PPIC_BOVIN (Peptidyl-prolyl cis-trans isomerase C OS=Bos taurus GN=PPIC PE=2 SV=1)

HSP 1 Score: 154.066 bits (388), Expect = 9.129e-37
Identity = 82/146 (56.16%), Postives = 92/146 (63.01%), Query Frame = 3
Query:  360 KVFFDMTVGGQPAGRIVMELFADVTPRTAENFRALCTGEKGIGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSXFADENFVKKHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFRSVVEGMDVVKAIE 797
            KVFFD+ +G +  GRIV+ LF  V P+T ENF AL TGEKG G       YKGS FHRVI  FM Q             SIYG  F DENF  KH G G +SMANAGP TNGSQFF+   K  WLDGKHVVF  V++GM VV +IE
Sbjct:   39 KVFFDVRIGDKDVGRIVIGLFGKVVPKTVENFVALATGEKGYG-------YKGSKFHRVIKDFMIQGGDFTRGDGTGGISIYGETFPDENFKLKHYGIGWVSMANAGPDTNGSQFFITLTKPTWLDGKHVVFGKVLDGMTVVHSIE 177          
The following BLAST results are available for this feature:
BLAST of FC929037 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 227
Match NameE-valueIdentityDescription
PPIA_SCHMA4.841e-3854.55Peptidyl-prolyl cis-trans isomerase OS=Schistosoma... [more]
PPIB_ASPOR6.322e-3853.29Peptidyl-prolyl cis-trans isomerase B OS=Aspergill... [more]
PPIB_SCHMA1.078e-3753.29Peptidyl-prolyl cis-trans isomerase B OS=Schistoso... [more]
PPIB_EMENI1.078e-3752.17Peptidyl-prolyl cis-trans isomerase B OS=Emericell... [more]
PPIC_HUMAN4.098e-3756.16Peptidyl-prolyl cis-trans isomerase C OS=Homo sapi... [more]
CYP5_CAEEL5.352e-3753.59Peptidyl-prolyl cis-trans isomerase 5 OS=Caenorhab... [more]
PPIC_MOUSE6.990e-3756.16Peptidyl-prolyl cis-trans isomerase C OS=Mus muscu... [more]
PPIB_SCHJA6.990e-3753.29Peptidyl-prolyl cis-trans isomerase B OS=Schistoso... [more]
PPIH_RHIOR9.129e-3749.68Peptidyl-prolyl cis-trans isomerase H OS=Rhizopus ... [more]
PPIC_BOVIN9.129e-3756.16Peptidyl-prolyl cis-trans isomerase C OS=Bos tauru... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAH1DC07RM2 PhII-IIIV1 Citrus clementina cDNA clone KN0AAH1DC07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC929037 ID=FC929037; Name=FC929037; organism=Citrus clementina; type=EST; length=830bp
GGCACGAGGTTGCTGGCGACGGCAAGGAGAATGGCCTCATTAGCAACCAC
TTCAGAGTCCAGGCGGTACTGCTGGCCTAACATGTAATGCCCCACGTAGT
CTGCACATTTTTCGGGAACAGTCGCCCATCCTATAACGTTATTAGTTTCC
ACTCCGAGTCGCCAACTCAGGCAGGACAAGCCGGGCACATCGTTGTTCCG
GGAACCGGCTTTCGGTCGGAGAAGATGAATCTGATGGGGGATGTCCATGC
TAAATCCATGGGATGTTGCTGCCTCGTGCCGAATTCGGCACGAGGATCAG
AAGTCCGTGTTTAGTTTGTTTTTTTCTCTCCAATCAACCAATCAAAAATG
CCAAACCCCAAAGTGTTCTTCGACATGACCGTCGGCGGTCAGCCCGCCGG
CAGGATCGTGATGGAGCTCTTCGCCGATGTCACCCCCCGAACCGCCGAGA
ACTTCCGCGCCCTCTGCACCGGCGAGAAAGGCATCGGCAAGTCCGGCAAG
CCACTCCACTACAAGGGCTCGTCCTTCCACCGTGTGATCCCCGGATTCAT
GTGCCAGGGGGGAGACTTCACCGCCGGAAACGGAACCGGAGGCGAATCAA
TCTACGGCTCANAATTCGCCGATGAGAACTTCGTGAAGAAGCACACCGGC
CCCGGAATCCTCTCCATGGCGAATGCCGGACCCGGAACCAACGGATCTCA
GTTCTTCGTCTGTACGGCCAAGACCGAGTGGCTCGATGGGAAGCACGTTG
TGTTTCGGTCAGTCGTCGAAGGAATGGACGTCGTCAAGGCCATCGAGAAA
GTGGGGTCCAGCTCCGGAAGGACCACAAGC
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