FC929037

Overview
NameFC929037
Unique NameFC929037
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length830
Libraries
Library NameType
PhII-IIIV1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC929037 vs. ExPASy Swiss-Prot
Match: CYPD_YEAST (Peptidyl-prolyl cis-trans isomerase D OS=Saccharomyces cerevisiae GN=CPR5 PE=1 SV=1)

HSP 1 Score: 134.806 bits (338), Expect = 5.731e-31
Identity = 76/152 (50.00%), Postives = 90/152 (59.21%), Query Frame = 3
Query:  360 KVFFDMTVGGQPAGRIVMELFADVTPRTAENFRALCTGEKGIGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSXFADENFVKKHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFRSVVEGMDVVKAIEKVGSSS 815
            KV+FD+  G +  GRIVM L+   TP+T ENF  L      I +  K + Y  S FHRVIP FM Q            +SI+G+ F DENF  KH  PG LSMAN G  TNGSQFF+ T    WLDGKHVVF  V++GMDVV  IE V + S
Sbjct:   35 KVYFDINHGDKQIGRIVMGLYGLTTPQTVENFYQLT-----ISRDPK-MGYLNSIFHRVIPNFMIQGGDFTHRSGIGGKSIFGNTFKDENFDVKHDKPGRLSMANRGKNTNGSQFFITTVPCPWLDGKHVVFGEVLDGMDVVHYIENVKTDS 180          
BLAST of FC929037 vs. ExPASy Swiss-Prot
Match: CYPB_YEAST (Peptidyl-prolyl cis-trans isomerase B OS=Saccharomyces cerevisiae GN=CPR2 PE=1 SV=1)

HSP 1 Score: 132.88 bits (333), Expect = 2.178e-30
Identity = 76/149 (51.01%), Postives = 89/149 (59.73%), Query Frame = 3
Query:  360 KVFFDMTVGGQPAGRIVMELFADVTPRTAENFRALCTGEKGIGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSXFADENFVKKHTGPGILSMANAGPGTNGSQFFVCTA-KTEWLDGKHVVFRSVVEGMDVVKAIEKV 803
            KVFFD+  G +  GRIV+ L+  V P+TA+NF  L T      K G    + GS+FHRVIP FM Q            +SIYG  F DENF  KH   G LSMAN G  TNGSQFF+ T  +  WLDGKHVVF  VV+GMDVV  I+ V
Sbjct:   37 KVFFDIEHGEEKVGRIVIGLYGKVCPKTAKNFYKLSTTTNS--KKG----FIGSTFHRVIPNFMVQGGDFTDGTGVGGKSIYGDTFPDENFTLKHDRKGRLSMANRGKDTNGSQFFITTTEEASWLDGKHVVFGQVVDGMDVVNYIQHV 179          
BLAST of FC929037 vs. ExPASy Swiss-Prot
Match: CYP9_CAEEL (Peptidyl-prolyl cis-trans isomerase 9 OS=Caenorhabditis elegans GN=cyn-9 PE=2 SV=3)

HSP 1 Score: 132.494 bits (332), Expect = 2.844e-30
Identity = 70/149 (46.98%), Postives = 90/149 (60.40%), Query Frame = 3
Query:  360 KVFFDMTVGGQPAGRIVMELFADVTPRTAENFRALCTGEKGIGKSGKP-LHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSXFADENFVKKHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFRSVVEGMDVVKAIEKV 803
            +VF D++V     GRI + LF +  P+T ENFRALCTGE G+  + K  LHYK + FHR++  FM Q             SIYG  F DE F  KH+ P +LSMAN GP +N SQFF+ TA     +GKHVVF  VV+G +VV  I+ +
Sbjct:    6 RVFLDISVDENLIGRIEIRLFVEDAPKTCENFRALCTGEVGMTPNNKARLHYKQNEFHRIVKKFMIQGGDITEGDGRGGFSIYGRYFDDEKFKLKHSRPYLLSMANKGPNSNSSQFFITTAAAPHCNGKHVVFGEVVKGQNVVDYIDNL 154          
BLAST of FC929037 vs. ExPASy Swiss-Prot
Match: PPIL6_HUMAN (Peptidyl-prolyl cis-trans isomerase-like 6 OS=Homo sapiens GN=PPIL6 PE=2 SV=1)

HSP 1 Score: 132.109 bits (331), Expect = 3.715e-30
Identity = 64/153 (41.83%), Postives = 88/153 (57.52%), Query Frame = 3
Query:  363 VFFDMTVGGQPAGRIVMELFADVTPRTAENFRALCTGEKGIGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSXFADENFVKKHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFRSVVEGMDVVKAIEKVGSSSGR 821
            VF D+ +   P GR++ EL+ DV P+T +NF+ LCTG+ G  + G  LHYK S FHR++     Q            ESIYG  F DENF   H   G+L MAN G  +NGSQF++    T +LD K V F  ++EG +V+K +E V + + R
Sbjct:  144 VFLDICIDSSPIGRLIFELYCDVCPKTCKNFQVLCTGKAGFSQRGIRLHYKNSIFHRIVQNGWIQGGDIVYGKGDNGESIYGPTFEDENFSVPHNKRGVLGMANKGRHSNGSQFYITLQATPYLDRKFVAFGQLIEGTEVLKQLELVPTQNER 296          
BLAST of FC929037 vs. ExPASy Swiss-Prot
Match: PPIL6_BOVIN (Peptidyl-prolyl cis-trans isomerase-like 6 OS=Bos taurus GN=PPIL6 PE=2 SV=1)

HSP 1 Score: 129.028 bits (323), Expect = 3.145e-29
Identity = 63/153 (41.18%), Postives = 88/153 (57.52%), Query Frame = 3
Query:  363 VFFDMTVGGQPAGRIVMELFADVTPRTAENFRALCTGEKGIGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSXFADENFVKKHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFRSVVEGMDVVKAIEKVGSSSGR 821
            VF D+++   P GR++ EL++D  P+T +NF+ LCTG+ G  +SG  LHY GS FHRV+     Q            ESIYG  F DENF   H   G+L M N G  +NGSQF++      +LD K+V F  ++EG DV+  +E V + + R
Sbjct:  140 VFLDISIDLYPIGRLIFELYSDTCPKTCKNFQILCTGKAGFSQSGIKLHYTGSIFHRVVRNGWVQGGDIVAGKGDNGESIYGPTFEDENFSVPHNKRGVLGMVNKGRHSNGSQFYITLQAAPYLDKKYVAFGQLIEGTDVLHHLESVPTENER 292          
BLAST of FC929037 vs. ExPASy Swiss-Prot
Match: CYPR_CALVI (Peptidyl-prolyl cis-trans isomerase, rhodopsin-specific isozyme OS=Calliphora vicina GN=NINAA PE=2 SV=1)

HSP 1 Score: 121.324 bits (303), Expect = 6.557e-27
Identity = 67/148 (45.27%), Postives = 81/148 (54.73%), Query Frame = 3
Query:  360 KVFFDMTVGGQPAGRIVMELFADVTPRTAENFRALCTGEKGIGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSXFADENFVKKHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFRSVVEGMDVVKAIEKV 803
            K++ D+    +P GRIV  LF    P+T  NFR +C   +GI  +     Y GS FHRVI  F+ Q             SIYG  F DE    +H  PG L MAN GP TNG QF+V T   +WL+GKH VF  V+EGMD V AIE V
Sbjct:   27 KIYMDVKHQKKPLGRIVFGLFGKRAPKTVTNFRHICL--RGINGTT----YVGSEFHRVISRFLIQGGDIVNNDGTGSTSIYGDFFQDEALDVEHLRPGYLGMANRGPDTNGCQFYVTTVAAQWLNGKHTVFGKVIEGMDTVYAIEDV 168          
BLAST of FC929037 vs. ExPASy Swiss-Prot
Match: CYPR_DROME (Peptidyl-prolyl cis-trans isomerase, rhodopsin-specific isozyme OS=Drosophila melanogaster GN=ninaA PE=1 SV=1)

HSP 1 Score: 118.242 bits (295), Expect = 5.551e-26
Identity = 64/150 (42.67%), Postives = 82/150 (54.67%), Query Frame = 3
Query:  360 KVFFDMTVGGQPAGRIVMELFADVTPRTAENFRALCTGEKGIGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSXFADEN--FVKKHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFRSVVEGMDVVKAIEKV 803
            +++ D+    +P GRI   LF  + P+T  NFR +C   +GI  +     Y GS FHRV+  F+ Q             SIYG  F DE+     +H  PG L MAN GP TNG QF+V T   +WLDGKH VF  V+EGMD + AIE V
Sbjct:   28 RIYMDVKHNKKPVGRITFGLFGKLAPKTVANFRHICL--RGINGTS----YVGSRFHRVVDRFLVQGGDIVNGDGTGSISIYGDYFPDEDKALAVEHNRPGYLGMANRGPDTNGCQFYVTTVGAKWLDGKHTVFGKVLEGMDTIYAIEDV 171          
BLAST of FC929037 vs. ExPASy Swiss-Prot
Match: PPIL1_RHIOR (Peptidyl-prolyl cis-trans isomerase-like 1 OS=Rhizopus oryzae GN=cyp3 PE=3 SV=1)

HSP 1 Score: 110.538 bits (275), Expect = 1.158e-23
Identity = 66/131 (50.38%), Postives = 76/131 (58.02%), Query Frame = 3
Query:  399 GRIVMELFADVTPRTAENFRALCTGEKGIGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSXFADE-NFVKKHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFRSVVEGMDVVK 788
            G I +EL+ D  PRT +NF  L           K  +Y G SFHR+I  FM Q             SIYG  FADE N   +HTG GILSMANAGP TNGSQFF+  A T WLDGKH +F  V +GM+VVK
Sbjct:   14 GSIHIELYWDHAPRTCKNFYELA----------KRGYYDGVSFHRIIADFMIQGGDPTGTGRGGT-SIYGERFADEINPGLQHTGAGILSMANAGPNTNGSQFFITLAPTPWLDGKHTIFGRVSDGMNVVK 133          
BLAST of FC929037 vs. ExPASy Swiss-Prot
Match: PPIB_TREPA (Probable peptidyl-prolyl cis-trans isomerase OS=Treponema pallidum GN=ppiB PE=1 SV=1)

HSP 1 Score: 108.227 bits (269), Expect = 5.745e-23
Identity = 65/133 (48.87%), Postives = 76/133 (57.14%), Query Frame = 3
Query:  399 GRIVMELFADVTPRTAENFRALCTGEKGIGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSXFADE-NFVKKHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFRSVVEGMDVVKAI 794
            G IV+ LF +  P T  NF  L  G   + K G+P  Y+G +FHRVI  FM Q                G  F DE +   +H  PG+LSMANAGPGTNGSQFF+    T WLDGKH VF  VVEGM+VV AI
Sbjct:   49 GTIVLSLFFEKAPLTVCNFVGLAEGTLAVCK-GRPF-YQGLTFHRVIKDFMIQGGDPQGNGTGGP----GYQFPDECDPALRHDSPGVLSMANAGPGTNGSQFFITHVATPWLDGKHTVFGKVVEGMEVVHAI 175          
BLAST of FC929037 vs. ExPASy Swiss-Prot
Match: PPIL1_SCHPO (Peptidyl-prolyl cis-trans isomerase ppi1 OS=Schizosaccharomyces pombe GN=ppi1 PE=1 SV=1)

HSP 1 Score: 104.76 bits (260), Expect = 6.351e-22
Identity = 61/140 (43.57%), Postives = 77/140 (55.00%), Query Frame = 3
Query:  399 GRIVMELFADVTPRTAENFRALCTGEKGIGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSXFADE-NFVKKHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFRSVVEGMDVVKAIEKVGSSS 815
            G+I++EL+ +  P+T +NF  L           K  +Y G  FHRVIP F+ Q             SIYG  F DE +    HTG GILSMANAGP TN SQFF+  A T WLDGKH +F  VV G+ V K +  + + S
Sbjct:   11 GKILIELYTEHAPKTCQNFYTLA----------KEGYYDGVIFHRVIPDFVIQGGDPTGTGRGGT-SIYGDKFDDEIHSDLHHTGAGILSMANAGPNTNSSQFFITLAPTPWLDGKHTIFGRVVSGLSVCKRMGLIRTDS 139          
The following BLAST results are available for this feature:
BLAST of FC929037 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 227
Match NameE-valueIdentityDescription
CYPD_YEAST5.731e-3150.00Peptidyl-prolyl cis-trans isomerase D OS=Saccharom... [more]
CYPB_YEAST2.178e-3051.01Peptidyl-prolyl cis-trans isomerase B OS=Saccharom... [more]
CYP9_CAEEL2.844e-3046.98Peptidyl-prolyl cis-trans isomerase 9 OS=Caenorhab... [more]
PPIL6_HUMAN3.715e-3041.83Peptidyl-prolyl cis-trans isomerase-like 6 OS=Homo... [more]
PPIL6_BOVIN3.145e-2941.18Peptidyl-prolyl cis-trans isomerase-like 6 OS=Bos ... [more]
CYPR_CALVI6.557e-2745.27Peptidyl-prolyl cis-trans isomerase, rhodopsin-spe... [more]
CYPR_DROME5.551e-2642.67Peptidyl-prolyl cis-trans isomerase, rhodopsin-spe... [more]
PPIL1_RHIOR1.158e-2350.38Peptidyl-prolyl cis-trans isomerase-like 1 OS=Rhiz... [more]
PPIB_TREPA5.745e-2348.87Probable peptidyl-prolyl cis-trans isomerase OS=Tr... [more]
PPIL1_SCHPO6.351e-2243.57Peptidyl-prolyl cis-trans isomerase ppi1 OS=Schizo... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAH1DC07RM2 PhII-IIIV1 Citrus clementina cDNA clone KN0AAH1DC07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC929037 ID=FC929037; Name=FC929037; organism=Citrus clementina; type=EST; length=830bp
GGCACGAGGTTGCTGGCGACGGCAAGGAGAATGGCCTCATTAGCAACCAC
TTCAGAGTCCAGGCGGTACTGCTGGCCTAACATGTAATGCCCCACGTAGT
CTGCACATTTTTCGGGAACAGTCGCCCATCCTATAACGTTATTAGTTTCC
ACTCCGAGTCGCCAACTCAGGCAGGACAAGCCGGGCACATCGTTGTTCCG
GGAACCGGCTTTCGGTCGGAGAAGATGAATCTGATGGGGGATGTCCATGC
TAAATCCATGGGATGTTGCTGCCTCGTGCCGAATTCGGCACGAGGATCAG
AAGTCCGTGTTTAGTTTGTTTTTTTCTCTCCAATCAACCAATCAAAAATG
CCAAACCCCAAAGTGTTCTTCGACATGACCGTCGGCGGTCAGCCCGCCGG
CAGGATCGTGATGGAGCTCTTCGCCGATGTCACCCCCCGAACCGCCGAGA
ACTTCCGCGCCCTCTGCACCGGCGAGAAAGGCATCGGCAAGTCCGGCAAG
CCACTCCACTACAAGGGCTCGTCCTTCCACCGTGTGATCCCCGGATTCAT
GTGCCAGGGGGGAGACTTCACCGCCGGAAACGGAACCGGAGGCGAATCAA
TCTACGGCTCANAATTCGCCGATGAGAACTTCGTGAAGAAGCACACCGGC
CCCGGAATCCTCTCCATGGCGAATGCCGGACCCGGAACCAACGGATCTCA
GTTCTTCGTCTGTACGGCCAAGACCGAGTGGCTCGATGGGAAGCACGTTG
TGTTTCGGTCAGTCGTCGAAGGAATGGACGTCGTCAAGGCCATCGAGAAA
GTGGGGTCCAGCTCCGGAAGGACCACAAGC
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