FC929037

Overview
NameFC929037
Unique NameFC929037
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length830
Libraries
Library NameType
PhII-IIIV1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC929037 vs. ExPASy Swiss-Prot
Match: PPIL3_HUMAN (Peptidyl-prolyl cis-trans isomerase-like 3 OS=Homo sapiens GN=PPIL3 PE=1 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 1.464e-18
Identity = 55/136 (40.44%), Postives = 73/136 (53.68%), Query Frame = 3
Query:  399 GRIVMELFADVTPRTAENFRALCTGEKGIGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSXFADE-NFVKKHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFRSVVEGMDVVKAIEKV 803
            G I +E+F + TP+T ENF ALC             +Y G  FHR I GFM Q             SI+G  F DE +   KH   G++SMAN GP TNGSQFF+   K   LD K+ VF  V++G++ +  +EK+
Sbjct:   10 GDIKIEVFCERTPKTCENFLALCASN----------YYNGCIFHRNIKGFMVQTGDPTGTGRGG-NSIWGKKFEDEYSEYLKHNVRGVVSMANNGPNTNGSQFFITYGKQPHLDMKYTVFGKVIDGLETLDELEKL 134          
BLAST of FC929037 vs. ExPASy Swiss-Prot
Match: PPIL2_MOUSE (Peptidyl-prolyl cis-trans isomerase-like 2 OS=Mus musculus GN=Ppil2 PE=2 SV=2)

HSP 1 Score: 93.5893 bits (231), Expect = 1.464e-18
Identity = 57/138 (41.30%), Postives = 72/138 (52.17%), Query Frame = 3
Query:  399 GRIVMELFADVTPRTAENFRALCTGEKGIGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSXFADENFVK-KHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFRSVVEGMDVVKAIEKVGS 809
            G + +EL  D+TP+T ENF  LC          K  +Y G+ FHR I  F+ Q            ES +G  F DE      HTG G+LSMAN+GP TN SQFF+      +LD KH +F  VV G D + A+E V S
Sbjct:  289 GDLNLELHCDLTPKTCENFIKLC----------KKQYYDGTIFHRSIRNFVIQGGDPTGTGTGG-ESFWGKPFKDEFRPNLSHTGRGVLSMANSGPNTNKSQFFITFRSCAYLDKKHTIFGRVVGGFDTLTAMENVES 415          
BLAST of FC929037 vs. ExPASy Swiss-Prot
Match: PPIL2_HUMAN (Peptidyl-prolyl cis-trans isomerase-like 2 OS=Homo sapiens GN=PPIL2 PE=1 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 1.912e-18
Identity = 58/138 (42.03%), Postives = 73/138 (52.90%), Query Frame = 3
Query:  399 GRIVMELFADVTPRTAENFRALCTGEKGIGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSXFADENFVK-KHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFRSVVEGMDVVKAIEKVGS 809
            G + +EL  D+TP+T ENF  LC          K  +Y G+ FHR I  F+ Q            ES +G  F DE      HTG GILSMAN+GP +N SQFF+      +LD KH +F  VV G DV+ A+E V S
Sbjct:  289 GDLNLELHCDLTPKTCENFIRLC----------KKHYYDGTIFHRSIRNFVIQGGDPTGTGTGG-ESYWGKPFKDEFRPNLSHTGRGILSMANSGPNSNRSQFFITFRSCAYLDKKHTIFGRVVGGFDVLTAMENVES 415          
BLAST of FC929037 vs. ExPASy Swiss-Prot
Match: CYPE_DICDI (Peptidyl-prolyl cis-trans isomerase cypE OS=Dictyostelium discoideum GN=cypE PE=1 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 1.912e-18
Identity = 56/142 (39.44%), Postives = 76/142 (53.52%), Query Frame = 3
Query:  399 GRIVMELFADVTPRTAENFRALCTGEKGIGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSXFADENFVK-KHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFRSVVEGMDVVKAIEKVGSSSGR 821
            G I +EL+ +  P+  +NF  L           K  +Y  + FHR+I  FM Q            ESIYG  F DE   + KHTG GILSMAN+G  +NGSQFF+    T WLDGKH +F  V  GM VV+ +  + +++ +
Sbjct:   13 GDITLELYYNHAPKACKNFYEL----------SKRGYYDNTIFHRLIKDFMIQGGDPLGNGRGG-ESIYGKKFEDEITKELKHTGAGILSMANSGVNSNGSQFFITFGPTPWLDGKHTIFGRVKSGMKVVQKMNAMQTNNDK 143          
BLAST of FC929037 vs. ExPASy Swiss-Prot
Match: PPIL2_ARATH (Peptidyl-prolyl cis-trans isomerase-like 2 OS=Arabidopsis thaliana GN=PUB49 PE=2 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 5.564e-18
Identity = 58/136 (42.65%), Postives = 73/136 (53.68%), Query Frame = 3
Query:  399 GRIVMELFADVTPRTAENFRALCTGEKGIGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSXFADE-NFVKKHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFRSVVEGMDVVKAIEKV 803
            G + +EL  D+ PR  ENF  LC  E+G        +Y G +FHR I  FM Q            ESI+G  F DE N    H+G G++SMAN+GP TNGSQFFV       L+ KH VF  VV G+  + A+E V
Sbjct:  353 GDLNIELHCDIAPRACENFITLC--ERG--------YYNGVAFHRSIRNFMIQGGDPTGTGKGG-ESIWGKPFKDEPNSKLLHSGRGVVSMANSGPHTNGSQFFVLYKSATHLNYKHTVFGGVVGGLATLAAMENV 477          
BLAST of FC929037 vs. ExPASy Swiss-Prot
Match: PPIL3_MOUSE (Peptidyl-prolyl cis-trans isomerase-like 3 OS=Mus musculus GN=Ppil3 PE=2 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 7.267e-18
Identity = 54/136 (39.71%), Postives = 72/136 (52.94%), Query Frame = 3
Query:  399 GRIVMELFADVTPRTAENFRALCTGEKGIGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSXFADE-NFVKKHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFRSVVEGMDVVKAIEKV 803
            G I +E+F + TP+T ENF ALC             +Y G  FHR I GFM Q             SI+   F DE +   KH   G++SMAN GP TNGSQFF+   K   LD K+ VF  V++G++ +  +EK+
Sbjct:   10 GDIKIEVFCERTPKTCENFLALCASN----------YYNGCVFHRNIKGFMVQTGDPTGTGRGG-SSIWAKKFEDEYSEYLKHNVRGVVSMANNGPNTNGSQFFITYGKQPHLDMKYTVFGKVIDGLETLDELEKL 134          
BLAST of FC929037 vs. ExPASy Swiss-Prot
Match: PPIL2_CRYNE (Peptidyl-prolyl cis-trans isomerase-like 2 OS=Cryptococcus neoformans GN=CYP8 PE=3 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 1.240e-17
Identity = 60/143 (41.96%), Postives = 73/143 (51.05%), Query Frame = 3
Query:  399 GRIVMELFADVTPRTAENFRALCTGEKGIGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSXFADENFVK---KHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFRSVVEGMDVVKAIEKVGSSSG 818
            G + +EL  D  P+T  NF  L        K+GK   Y    FHR+IPGFM Q            ES +G  F DE+  K   KH   G+LSMAN+GP TNGSQFF     T  LDGKH VF  +V G + +  IE+V    G
Sbjct:  323 GPLNVELHGDRAPKTVYNFVQLA-------KAGK---YDNVVFHRLIPGFMVQGGDPTGTGRGG-ESYWGEPFRDEHGEKGAYKHDSRGVLSMANSGPRTNGSQFFFTFRPTPHLDGKHTVFGKLVGGEETLDKIERVNVRPG 454          
BLAST of FC929037 vs. ExPASy Swiss-Prot
Match: PPIL6_MOUSE (Peptidyl-prolyl cis-trans isomerase-like 6 OS=Mus musculus GN=Ppil6 PE=2 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 4.710e-17
Identity = 43/102 (42.16%), Postives = 53/102 (51.96%), Query Frame = 3
Query:  363 VFFDMTVGGQPAGRIVMELFADVTPRTAENFRALCTGEKGIGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSXFADENFVKKHTGPGILSM 668
            V+ D+ +   P GR++ EL+ D  PRT  NF+ LCTG  G  + G  LHYK S FHRV+     Q            ESIYG  F DENF   H   G+L M
Sbjct:  146 VYLDICIDLSPIGRLIFELYCDACPRTCTNFQVLCTGTSGFSERGTKLHYKDSIFHRVVQNGWIQGGDIVQGRGDDGESIYGPTFEDENFSIPHNKRGVLGM 247          
BLAST of FC929037 vs. ExPASy Swiss-Prot
Match: PPIL3_GIBZE (Peptidyl-prolyl cis-trans isomerase-like 3 OS=Gibberella zeae GN=CYP10 PE=3 SV=2)

HSP 1 Score: 88.1965 bits (217), Expect = 6.152e-17
Identity = 59/142 (41.55%), Postives = 74/142 (52.11%), Query Frame = 3
Query:  399 GRIVMELFADVTPRTAENFRALCTGEKGIGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXX----ESIYGSXFADE-NFVKKHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFRSVV--EGMDVVKAIEKV 803
            G I +E++ +  P+TAENF ALC    G G      +Y  S FHRVIP FM Q                 SI+G  F DE     +H   G+LSMAN GPGTNGSQFF+   K   LDG + VF  V+  EG+  +  +E V
Sbjct:   10 GDIKVEIYCESVPKTAENFLALC----GSG------YYDKSPFHRVIPKFMAQTGAPATPNPPENPKGGRSIWGGAFEDEIRPALRHGARGVLSMANKGPGTNGSQFFITFDKAPHLDGLNTVFGRVIGDEGLATLAKMEAV 141          
BLAST of FC929037 vs. ExPASy Swiss-Prot
Match: CYP10_CAEEL (Peptidyl-prolyl cis-trans isomerase 10 OS=Caenorhabditis elegans GN=cyn-10 PE=2 SV=2)

HSP 1 Score: 87.8113 bits (216), Expect = 8.035e-17
Identity = 55/138 (39.86%), Postives = 72/138 (52.17%), Query Frame = 3
Query:  396 AGRIVMELFADVTPRTAENFRALCTGEKGIGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSXFADENFVK--KHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFRSVVEGMDVVKAIEKV 803
            +G I +EL+ D  P+  ENF ALC  +          +Y G  FHR I  FM Q            ESI+G  F DE FV   KH   G +SMAN GP +N SQFF+  AK   LD K+ +F  V++G D ++ IE +
Sbjct:    9 SGDIKIELYVDDAPKACENFLALCASD----------YYNGCIFHRNIKDFMVQTGDPTHSGKGG-ESIWGGPFEDE-FVSALKHDSRGCVSMANNGPDSNRSQFFITYAKQAHLDMKYTLFGKVIDGFDTLEEIETI 134          
The following BLAST results are available for this feature:
BLAST of FC929037 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 227
Match NameE-valueIdentityDescription
PPIL3_HUMAN1.464e-1840.44Peptidyl-prolyl cis-trans isomerase-like 3 OS=Homo... [more]
PPIL2_MOUSE1.464e-1841.30Peptidyl-prolyl cis-trans isomerase-like 2 OS=Mus ... [more]
PPIL2_HUMAN1.912e-1842.03Peptidyl-prolyl cis-trans isomerase-like 2 OS=Homo... [more]
CYPE_DICDI1.912e-1839.44Peptidyl-prolyl cis-trans isomerase cypE OS=Dictyo... [more]
PPIL2_ARATH5.564e-1842.65Peptidyl-prolyl cis-trans isomerase-like 2 OS=Arab... [more]
PPIL3_MOUSE7.267e-1839.71Peptidyl-prolyl cis-trans isomerase-like 3 OS=Mus ... [more]
PPIL2_CRYNE1.240e-1741.96Peptidyl-prolyl cis-trans isomerase-like 2 OS=Cryp... [more]
PPIL6_MOUSE4.710e-1742.16Peptidyl-prolyl cis-trans isomerase-like 6 OS=Mus ... [more]
PPIL3_GIBZE6.152e-1741.55Peptidyl-prolyl cis-trans isomerase-like 3 OS=Gibb... [more]
CYP10_CAEEL8.035e-1739.86Peptidyl-prolyl cis-trans isomerase 10 OS=Caenorha... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAH1DC07RM2 PhII-IIIV1 Citrus clementina cDNA clone KN0AAH1DC07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC929037 ID=FC929037; Name=FC929037; organism=Citrus clementina; type=EST; length=830bp
GGCACGAGGTTGCTGGCGACGGCAAGGAGAATGGCCTCATTAGCAACCAC
TTCAGAGTCCAGGCGGTACTGCTGGCCTAACATGTAATGCCCCACGTAGT
CTGCACATTTTTCGGGAACAGTCGCCCATCCTATAACGTTATTAGTTTCC
ACTCCGAGTCGCCAACTCAGGCAGGACAAGCCGGGCACATCGTTGTTCCG
GGAACCGGCTTTCGGTCGGAGAAGATGAATCTGATGGGGGATGTCCATGC
TAAATCCATGGGATGTTGCTGCCTCGTGCCGAATTCGGCACGAGGATCAG
AAGTCCGTGTTTAGTTTGTTTTTTTCTCTCCAATCAACCAATCAAAAATG
CCAAACCCCAAAGTGTTCTTCGACATGACCGTCGGCGGTCAGCCCGCCGG
CAGGATCGTGATGGAGCTCTTCGCCGATGTCACCCCCCGAACCGCCGAGA
ACTTCCGCGCCCTCTGCACCGGCGAGAAAGGCATCGGCAAGTCCGGCAAG
CCACTCCACTACAAGGGCTCGTCCTTCCACCGTGTGATCCCCGGATTCAT
GTGCCAGGGGGGAGACTTCACCGCCGGAAACGGAACCGGAGGCGAATCAA
TCTACGGCTCANAATTCGCCGATGAGAACTTCGTGAAGAAGCACACCGGC
CCCGGAATCCTCTCCATGGCGAATGCCGGACCCGGAACCAACGGATCTCA
GTTCTTCGTCTGTACGGCCAAGACCGAGTGGCTCGATGGGAAGCACGTTG
TGTTTCGGTCAGTCGTCGAAGGAATGGACGTCGTCAAGGCCATCGAGAAA
GTGGGGTCCAGCTCCGGAAGGACCACAAGC
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