FC929040

Overview
NameFC929040
Unique NameFC929040
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length875
Libraries
Library NameType
PhII-IIIV1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of FC929040 vs. ExPASy Swiss-Prot
Match: AQP4_DIPME (Aquaporin-4 OS=Dipodomys merriami GN=AQP4 PE=2 SV=1)

HSP 1 Score: 67.0106 bits (162), Expect = 1.494e-17
Identity = 31/62 (50.00%), Postives = 41/62 (66.13%), Query Frame = -3 
Query:  451 IGFAVFMVHLATIPITGTGINPARSFGAAVIYNKEKAWDDQWIFWVGPFIGAFVAAFYHQYI 636
            IGF+V + HL  I  TG  +NPARSFG AVI      W++ WI+WVGP IGA +A   ++Y+
Sbjct:  193 IGFSVAIGHLFAINYTGASMNPARSFGPAVIMGN---WENHWIYWVGPIIGAVLAGGLYEYV 251

HSP 2 Score: 41.5874 bits (96), Expect = 1.494e-17
Identity = 26/67 (38.81%), Postives = 38/67 (56.72%), Query Frame = -2 
Query:  677 MVAQCLGAICGCGFVKAFQKSYYNRYGG-GANELADGYNKGTGLGAEIIGTFVLVYTVFSATDPKRS 874
            + AQCLGAI G G +  +  +  +  GG G   +      G GL  E+I TF LV+T+F++ D KR+
Sbjct:  119 IAAQCLGAIIGAGIL--YLVTPPSVVGGLGVTTVHGNLTAGHGLLVELIITFQLVFTIFASCDSKRT 183
[Close]
BLAST of FC929040 vs. ExPASy Swiss-Prot
Match: AQP4_HUMAN (Aquaporin-4 OS=Homo sapiens GN=AQP4 PE=1 SV=2)

HSP 1 Score: 67.0106 bits (162), Expect = 1.942e-17
Identity = 31/62 (50.00%), Postives = 41/62 (66.13%), Query Frame = -3 
Query:  451 IGFAVFMVHLATIPITGTGINPARSFGAAVIYNKEKAWDDQWIFWVGPFIGAFVAAFYHQYI 636
            IGF+V + HL  I  TG  +NPARSFG AVI      W++ WI+WVGP IGA +A   ++Y+
Sbjct:  193 IGFSVAIGHLFAINYTGASMNPARSFGPAVIMGN---WENHWIYWVGPIIGAVLAGGLYEYV 251

HSP 2 Score: 41.2022 bits (95), Expect = 1.942e-17
Identity = 26/67 (38.81%), Postives = 38/67 (56.72%), Query Frame = -2 
Query:  677 MVAQCLGAICGCGFVKAFQKSYYNRYGG-GANELADGYNKGTGLGAEIIGTFVLVYTVFSATDPKRS 874
            + AQCLGAI G G +  +  +  +  GG G   +      G GL  E+I TF LV+T+F++ D KR+
Sbjct:  119 IAAQCLGAIIGAGIL--YLVTPPSVVGGLGVTMVHGNLTAGHGLLVELIITFQLVFTIFASCDSKRT 183
[Close]
BLAST of FC929040 vs. ExPASy Swiss-Prot
Match: AQP4_MOUSE (Aquaporin-4 OS=Mus musculus GN=Aqp4 PE=2 SV=2)

HSP 1 Score: 64.6994 bits (156), Expect = 3.282e-17
Identity = 30/62 (48.39%), Postives = 40/62 (64.52%), Query Frame = -3 
Query:  451 IGFAVFMVHLATIPITGTGINPARSFGAAVIYNKEKAWDDQWIFWVGPFIGAFVAAFYHQYI 636
            IGF+V + HL  I  TG  +NPARSFG AVI      W + WI+WVGP +GA +A   ++Y+
Sbjct:  193 IGFSVAIGHLFAINYTGASMNPARSFGPAVIMGN---WANHWIYWVGPIMGAVLAGALYEYV 251

HSP 2 Score: 42.743 bits (99), Expect = 3.282e-17
Identity = 26/67 (38.81%), Postives = 39/67 (58.21%), Query Frame = -2 
Query:  677 MVAQCLGAICGCGFVKAFQKSYYNRYGG-GANELADGYNKGTGLGAEIIGTFVLVYTVFSATDPKRS 874
            ++AQCLGAI G G +  +  +  +  GG G   +      G GL  E+I TF LV+T+F++ D KR+
Sbjct:  119 IIAQCLGAIIGAGIL--YLVTPPSVVGGLGVTTVHGNLTAGHGLLVELIITFQLVFTIFASCDSKRT 183
[Close]
BLAST of FC929040 vs. ExPASy Swiss-Prot
Match: AQP4_BOVIN (Aquaporin-4 OS=Bos taurus GN=AQP4 PE=2 SV=3)

HSP 1 Score: 64.6994 bits (156), Expect = 5.547e-17
Identity = 30/62 (48.39%), Postives = 40/62 (64.52%), Query Frame = -3 
Query:  451 IGFAVFMVHLATIPITGTGINPARSFGAAVIYNKEKAWDDQWIFWVGPFIGAFVAAFYHQYI 636
            IG +V + HL  I  TG  +NPARSFG AVI      W++ WI+WVGP IGA +A   ++Y+
Sbjct:  193 IGISVAIGHLFAINYTGASMNPARSFGPAVIMGN---WENHWIYWVGPIIGAVLAGGLYEYV 251

HSP 2 Score: 41.9726 bits (97), Expect = 5.547e-17
Identity = 26/67 (38.81%), Postives = 39/67 (58.21%), Query Frame = -2 
Query:  677 MVAQCLGAICGCGFVKAFQKSYYNRYGG-GANELADGYNKGTGLGAEIIGTFVLVYTVFSATDPKRS 874
            + AQCLGAI G G +  +  +  +  GG G   +    + G GL  E+I TF LV+T+F++ D KR+
Sbjct:  119 IAAQCLGAIIGAGIL--YLVTPPSVVGGLGVTTVHGNLSAGHGLLVELIITFQLVFTIFASCDSKRT 183
[Close]
BLAST of FC929040 vs. ExPASy Swiss-Prot
Match: AQP_HAEIX (Aquaporin OS=Haematobia irritans exigua PE=2 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 5.916e-16
Identity = 28/64 (43.75%), Postives = 42/64 (65.62%), Query Frame = -3 
Query:  445 IGFAVFMVHLATIPITGTGINPARSFGAAVIYNKEKAWDDQWIFWVGPFIGAFVAAFYHQYILR 636
            +G ++   HL  I +TG  +NPARSFG AV+ N    W D W++WVGP +GA VAA  ++++ +
Sbjct:  178 VGLSIAAGHLCAIKLTGASMNPARSFGPAVVQNM---WIDHWVYWVGPIVGAIVAALLYKFVFK 238

HSP 2 Score: 33.8834 bits (76), Expect = 5.916e-16
Identity = 20/78 (25.64%), Postives = 32/78 (41.03%), Query Frame = -2 
Query:  641 MVAQCLGAICGCGFVKAFQKSYYNRYGGGANELADGYNKGTGLGAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPL 874
            +  QC+GAI G   +K       +    G +  +     G  +  E + TF+LV  V   +DP R+      P+   L
Sbjct:  103 IAVQCVGAIAGAAVIKVGVSEAVSGLDLGVSSFSSTLTVGQAVLIEALITFILVVVVKGVSDPGRTDIKGSAPLAVGL 180
[Close]
BLAST of FC929040 vs. ExPASy Swiss-Prot
Match: AQP_AEDAE (Aquaporin AQPAe.a OS=Aedes aegypti GN=AAEL003512 PE=2 SV=2)

HSP 1 Score: 62.003 bits (149), Expect = 2.852e-15
Identity = 26/64 (40.62%), Postives = 38/64 (59.38%), Query Frame = -3 
Query:  445 IGFAVFMVHLATIPITGTGINPARSFGAAVIYNKEKAWDDQWIFWVGPFIGAFVAAFYHQYILR 636
            IG ++   HL+ I  TG  +NPARSFG AV+      W DQW++WVGP +G  +A   ++   +
Sbjct:  178 IGLSITAGHLSAIKYTGASMNPARSFGPAVVMGN---WTDQWVYWVGPIVGGILAGAVYRLFFK 238

HSP 2 Score: 38.891 bits (89), Expect = 2.852e-15
Identity = 25/75 (33.33%), Postives = 37/75 (49.33%), Query Frame = -2 
Query:  653 MVAQCLGAICGCGFVKAFQKSYYNRYGG-GANELADGYNKGTGLGAEIIGTFVLVYTVFSATDPKRSARDSHVPV 874
            +V+QC+GAI G   +KA   S  +  GG G   +      G G+  E + TF+LV+ V    D +RS      P+
Sbjct:  104 IVSQCVGAIAGAALIKAATPS--DVIGGLGVTGIDPRLTAGQGVMIEALITFILVFVVHGVCDNRRSDIKGSAPL 176
[Close]
BLAST of FC929040 vs. ExPASy Swiss-Prot
Match: AQP_ANOGA (Aquaporin AQPAn.G OS=Anopheles gambiae GN=AGAP008842 PE=3 SV=4)

HSP 1 Score: 58.151 bits (139), Expect = 4.815e-15
Identity = 26/64 (40.62%), Postives = 37/64 (57.81%), Query Frame = -3 
Query:  445 IGFAVFMVHLATIPITGTGINPARSFGAAVIYNKEKAWDDQWIFWVGPFIGAFVAAFYHQYILR 636
            IG ++   HLA I  TG  +NPARSFG AV+      + D W++WVGP +G  VA   ++   +
Sbjct:  177 IGLSITAGHLAAIKYTGASMNPARSFGPAVVMGN---YTDLWVYWVGPIVGGIVAGAVYRLFFK 237

HSP 2 Score: 41.9726 bits (97), Expect = 4.815e-15
Identity = 26/75 (34.67%), Postives = 39/75 (52.00%), Query Frame = -2 
Query:  653 MVAQCLGAICGCGFVKAFQKSYYNRYGG-GANELADGYNKGTGLGAEIIGTFVLVYTVFSATDPKRSARDSHVPV 874
            +V+QC+GAI G   +KA   S     GG G   +A G + G G+  E + TF+LV+ V    D +R+      P+
Sbjct:  103 IVSQCIGAIAGAAVIKAATPS--EVVGGLGVTGIAPGLSTGQGVLIEALITFMLVFVVHGVCDNRRTDVKGSAPL 175
[Close]
BLAST of FC929040 vs. ExPASy Swiss-Prot
Match: AQP5_PIG (Aquaporin-5 OS=Sus scrofa GN=AQP5 PE=2 SV=1)

HSP 1 Score: 63.929 bits (154), Expect = 8.118e-15
Identity = 31/63 (49.21%), Postives = 40/63 (63.49%), Query Frame = -3 
Query:  448 IGFAVFMVHLATIPITGTGINPARSFGAAVIYNKEKAWDDQWIFWVGPFIGAFVAAFYHQYIL 636
            IG +V + HL  I  TG  +NPARSFG AV+ N+       W+FWVGP +GA VAA  + Y+L
Sbjct:  165 IGLSVTLGHLVGIYFTGCSMNPARSFGPAVVMNRFS--PSHWVFWVGPIVGAAVAAILYFYLL 225

HSP 2 Score: 35.4242 bits (80), Expect = 8.118e-15
Identity = 24/68 (35.29%), Postives = 35/68 (51.47%), Query Frame = -2 
Query:  674 MVAQCLGAICGCGFVKAFQKSYYNRYGGGA-NELADGYNKGTGLGAEIIGTFVLVYTVFSATDPKRSA 874
            +VAQ +GAI G G +        N  G  A N L +    G  +  E+I TF L   +FS+TD +R++
Sbjct:   91 VVAQLVGAIAGAGILYGLAPG--NARGNLAVNSLNNNTTPGQAVVVEMILTFQLALCIFSSTDSRRTS 156
[Close]
BLAST of FC929040 vs. ExPASy Swiss-Prot
Match: AQP_CICVR (Aquaporin AQPcic OS=Cicadella viridis GN=AQP PE=1 SV=1)

HSP 1 Score: 64.3142 bits (155), Expect = 8.129e-15
Identity = 28/65 (43.08%), Postives = 40/65 (61.54%), Query Frame = -3 
Query:  442 IGFAVFMVHLATIPITGTGINPARSFGAAVIYNKEKAWDDQWIFWVGPFIGAFVAAFYHQYILRA 636
            +G A+   HLA I  TG+ +NPARSFG AV  N +  W + W++W GP +G  VA   ++ + RA
Sbjct:  181 VGLAITCCHLAAIKYTGSSMNPARSFGPAV--NGDDNWANHWVYWAGPIVGGVVAGITYRALFRA 243

HSP 2 Score: 35.039 bits (79), Expect = 8.129e-15
Identity = 26/86 (30.23%), Postives = 36/86 (41.86%), Query Frame = -2 
Query:  617 MVAQCLGAICGCGFVKAFQKSYYNRYGGGANELADGYNKGTGLGAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPHWVCCVH 874
            ++ QC+GAI G   +K    + + R       LA G     G   E   TFVL+  V S  D +R    +  PV   L   + C H
Sbjct:  107 IIVQCVGAIAGSAILKVITPAEF-RGTLCMTSLAPGVTPPMGFLVEACITFVLILLVQSVCDDRRKNLGNAAPVAVGLA--ITCCH 189
[Close]
BLAST of FC929040 vs. ExPASy Swiss-Prot
Match: AQP5_SHEEP (Aquaporin-5 OS=Ovis aries GN=AQP5 PE=2 SV=1)

HSP 1 Score: 60.8474 bits (146), Expect = 1.781e-14
Identity = 30/63 (47.62%), Postives = 40/63 (63.49%), Query Frame = -3 
Query:  448 IGFAVFMVHLATIPITGTGINPARSFGAAVIYNKEKAWDDQWIFWVGPFIGAFVAAFYHQYIL 636
            IG +V + HL  I  TG  +NPARSFG AVI ++  +    W+FWVGP +GA  AA  + Y+L
Sbjct:  165 IGLSVTLGHLVGIYFTGCSMNPARSFGPAVIMSRFSS--AHWVFWVGPIVGAATAAIIYFYLL 225

HSP 2 Score: 37.3502 bits (85), Expect = 1.781e-14
Identity = 24/67 (35.82%), Postives = 34/67 (50.75%), Query Frame = -2 
Query:  674 MVAQCLGAICGCGFVKAFQKSYYNRYGGGANELADGYNKGTGLGAEIIGTFVLVYTVFSATDPKRSA 874
            +VAQ +GAI G   +      Y  R     N L +    G  + AE+I TF L   VFS+TD +R++
Sbjct:   91 LVAQLVGAIAGAAILYGLAP-YNARSNLAVNALNNNTTAGQAVVAEMILTFQLALCVFSSTDSRRTS 156
The following BLAST results are available for this feature:
BLAST of FC929040 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 73
Match NameE-valueIdentityDescription
AQP4_DIPME1.494e-1750.00Aquaporin-4 OS=Dipodomys merriami GN=AQP4 PE=2 SV=... [more]
AQP4_HUMAN1.942e-1750.00Aquaporin-4 OS=Homo sapiens GN=AQP4 PE=1 SV=2[more]
AQP4_MOUSE3.282e-1748.39Aquaporin-4 OS=Mus musculus GN=Aqp4 PE=2 SV=2[more]
AQP4_BOVIN5.547e-1748.39Aquaporin-4 OS=Bos taurus GN=AQP4 PE=2 SV=3[more]
AQP_HAEIX5.916e-1643.75Aquaporin OS=Haematobia irritans exigua PE=2 SV=1[more]
AQP_AEDAE2.852e-1540.63Aquaporin AQPAe.a OS=Aedes aegypti GN=AAEL003512 P... [more]
AQP_ANOGA4.815e-1540.63Aquaporin AQPAn.G OS=Anopheles gambiae GN=AGAP0088... [more]
AQP5_PIG8.118e-1549.21Aquaporin-5 OS=Sus scrofa GN=AQP5 PE=2 SV=1[more]
AQP_CICVR8.129e-1543.08Aquaporin AQPcic OS=Cicadella viridis GN=AQP PE=1 ... [more]
AQP5_SHEEP1.781e-1447.62Aquaporin-5 OS=Ovis aries GN=AQP5 PE=2 SV=1[more]

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Properties
Property NameValue
Genbank descriptionKN0AAH1DC10RM2 PhII-IIIV1 Citrus clementina cDNA clone KN0AAH1DC10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC929040 ID=FC929040; Name=FC929040; organism=Citrus clementina; type=EST; length=875bp
TTTTTTTTTACAAAAAGGTCATAGTTTTATTCACTAGAGTTGGGGATTAA
TTAACATTAACAACATAAATACACCACTTGAAATAAAGAAAAAGGAAAGG
ATAAGAAAAATATAGAGAAATAGGATATATAAAAAACACCACCACCACTT
ATAAACACACCCAAAGAAAAAAATTAAAATGGGATACCAAAATCCACCCT
TACACATAGATAAAGCATAGGCATAAAATGCATAATGTTCAAATATCTAC
AATTCAATAGCCCTCTAATTCAGCTCAAATTCAATGGCCCTCTAAAGAGC
TTGAAAAGAGATTTCTTAAAGGGCCTTCGTAACAGACTTGCACTCCTGAT
CATGCTGTAAATTTTTCACCTTGGAAGCACCAGACATCATATTTAAAGCT
TAAGCATTGCTCCTGAAGGATCCAAGAGCCTTAATGGCTGCTGCCCTGAG
AATGTATTGGTGGTAGAATGCAGCAACGAAAGCTCCAATGAATGGTCCAA
CCCAGAAGATCCATTGGTCATCCCAGGCTTTCTCCTTGTTGTAGATCACA
GCAGCTCCAAAACTCCTAGCTGGGTTGATGCCGGTTCCGGTGATGGGGAT
GGTGGCCAAGTGAACCATGAACACAGCAAACCCAATGGGGGAGTGGTGCC
AAGACCGGAACATGGGAGTCTCTTGCGCTCCTCTTAGGATCAGTGGCAGA
GAAAACAGTGTAGACAAGAACGAAAGTACCGATGATCTCAGCACCCAGTC
CGGTGCCCTTGTTGTATCCATCAGCTAGCTCATTGGCCCCACCTCCATAC
CTGTTGTAGTATGATTTTTGGAAAGCCTTCACAAACCCACAACCACAGAT
TGCACCCAAGCACTGTGCTACCATG
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