FC929040
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC929040 vs. ExPASy Swiss-Prot
Match: AQPZ_PSEPK (Aquaporin Z OS=Pseudomonas putida (strain KT2440) GN=aqpZ PE=3 SV=1) HSP 1 Score: 54.299 bits (129), Expect = 3.512e-11 Identity = 25/54 (46.30%), Postives = 35/54 (64.81%), Query Frame = -3 Query: 475 IGFAVFMVHLATIPITGTGINPARSFGAAVIYNKEKAWDDQWIFWVGPFIGAFV 636 IG A+ ++HL +IP+T T +NPARS G A ++ A W+FWV P IGA + Sbjct: 166 IGLALTLIHLISIPVTNTSVNPARSTGPA-LFVGGWALQQLWLFWVAPLIGAAI 218 HSP 2 Score: 32.7278 bits (73), Expect = 3.512e-11 Identity = 20/74 (27.03%), Postives = 33/74 (44.59%), Query Frame = -2 Query: 674 MVAQCLGAICGCGFV-------KAFQKSYYNRYGGGANELADGYNKGTGLGAEIIGTFVLVYTVFSATDPKRSA 874 ++AQ +GAI G + F+ S G A+ GY G G +E++ T + + + ATD + A Sbjct: 86 VIAQVIGAILAAGVIYLIASGKAGFELSAGLASNGYADHSPGGYTLGAGFVSEVVMTAMFLVVIMGATDARAPA 159
BLAST of FC929040 vs. ExPASy Swiss-Prot
Match: TIP22_ARATH (Probable aquaporin TIP2-2 OS=Arabidopsis thaliana GN=TIP2-2 PE=1 SV=2) HSP 1 Score: 48.521 bits (114), Expect = 4.545e-11 Identity = 25/59 (42.37%), Postives = 33/59 (55.93%), Query Frame = -3 Query: 460 IGFAVFMVHLATIPITGTGINPARSFGAAVIYNKEKAWDDQWIFWVGPFIGAFVAAFYH 636 IGF V LA P +G +NPARSFG AV+ + WI+WVGP +G +A + Sbjct: 177 IGFIVGANILAAGPFSGGSMNPARSFGPAVVSGD---FSQIWIYWVGPLVGGALAGLIY 232 HSP 2 Score: 38.1206 bits (87), Expect = 4.545e-11 Identity = 25/74 (33.78%), Postives = 38/74 (51.35%), Query Frame = -2 Query: 653 VAQCLGAICGCGFVKAFQKSYYNRYGGGANELADGYNKGTGLGAEIIGTFVLVYTVF-SATDPKRSARDSHVPV 871 +AQCLG+I C + N + +A G G+ EI+ TF LVYTV+ +A DPK+ + + P+ Sbjct: 106 IAQCLGSIVACLLLVFVT----NGESVPTHGVAAGLGAIEGVVMEIVVTFALVYTVYATAADPKKGSLGTIAPI 175
BLAST of FC929040 vs. ExPASy Swiss-Prot
Match: TIP1_MEDTR (Probable aquaporin TIP-type OS=Medicago truncatula GN=AQP1 PE=1 SV=1) HSP 1 Score: 48.1358 bits (113), Expect = 5.900e-11 Identity = 23/62 (37.10%), Postives = 33/62 (53.23%), Query Frame = -3 Query: 451 IGFAVFMVHLATIPITGTGINPARSFGAAVIYNKEKAWDDQWIFWVGPFIGAFVAAFYHQYI 636 IGF V L TG +NPA SFG AV+ +W + W++W GP IG +A ++ + Sbjct: 178 IGFIVGANILVGGAFTGASMNPAVSFGPAVV---SWSWSNHWVYWAGPLIGGGIAGLVYEVL 236 HSP 2 Score: 38.1206 bits (87), Expect = 5.900e-11 Identity = 26/79 (32.91%), Postives = 42/79 (53.16%), Query Frame = -2 Query: 641 MVAQCLGAICGCGFVKAFQKSYYNRYGGGANELADGYNKGTGLGAEIIGTFVLVYTVF-SATDPKRSARDSHVPVLAPL 874 ++AQ LG+I + S +G L++G G L EI+ TF LVYTV+ +A DPK+ ++ ++AP+ Sbjct: 107 IIAQLLGSIVASALLVFVTASSVPAFG-----LSEGVGVGPALVLEIVMTFGLVYTVYATAVDPKK----GNIGIIAPI 176 The following BLAST results are available for this feature:
BLAST of FC929040 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 73
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Sequences
The
following sequences are available for this feature:
EST sequence >FC929040 ID=FC929040; Name=FC929040; organism=Citrus clementina; type=EST; length=875bpback to top |