FC929045

Overview
NameFC929045
Unique NameFC929045
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length847
Libraries
Library NameType
PhII-IIIV1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC929045 vs. ExPASy Swiss-Prot
Match: CCR35_ARATH (Serine/threonine-protein kinase-like protein At3g51990 OS=Arabidopsis thaliana GN=At3g51990 PE=2 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 9.438e-13
Identity = 48/150 (32.00%), Postives = 82/150 (54.67%), Query Frame = 1
Query:  418 ELQSATNNFSFENLIGKGGYAEVYKGRLRNGQLVAIKRLTRGTADEIIADFLSELGIMAHVDHPNTAKLLGYGIEGGMH--IVLELSPNGSLASLLY-----GMKEKLKWGIRYKIALGVAEGLLYLHEGCQRRIIHRDIKAAHILLTED 846
            +L+SAT  F   NL+G+G +  VYK  +   + +A+KR ++  + EI  +F +E  I++ +  P    LLG+  +      +V+E   NGSL  +++            W  R KIAL +A+ +  LH   +  IIHRDIK+A++L+ ++
Sbjct:   51 DLESATGGFDINNLLGRGSHGSVYKAVI-GSRHIAVKRPSK--SREISREFHNEFEILSRIRSPRFVNLLGFSADNSKEPLLVVEFMGNGSLYDVIHSDTVLNSGAISSWSKRIKIALQIAKAVHLLHSQ-ETPIIHRDIKSANVLMDKN 196          
BLAST of FC929045 vs. ExPASy Swiss-Prot
Match: Y5694_ARATH (Probably inactive leucine-rich repeat receptor-like protein kinase At5g06940 OS=Arabidopsis thaliana GN=At5g06940 PE=3 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 1.233e-12
Identity = 43/125 (34.40%), Postives = 76/125 (60.80%), Query Frame = 1
Query:  478 AEVYKGRLRNGQLVAIKRLTRGTADEIIADFL-SELGIMAHVDHPNTAKLLGYGIEGGM-HIVLELSPNGSLASLLYGMKEKLKWGIRYKIALGVAEGLLYLHEGCQRRIIHRDIKAAHILLTED 846
            +EVY   L +G+L+A+K+L    +  I +  L +++  +A + H N  ++LG+  +  M  ++ E + NGSL  +L    ++L W IR KIALGVA+ L Y+ +     ++HR++K+A+I L +D
Sbjct:  601 SEVYVLSLSSGELLAVKKLVN--SKNISSKSLKAQVRTIAKIRHKNITRILGFCFKDEMIFLIYEFTQNGSLHDMLSRAGDQLPWSIRLKIALGVAQALAYISKDYVPHLLHRNLKSANIFLDKD 723          
BLAST of FC929045 vs. ExPASy Swiss-Prot
Match: ROCO9_DICDI (Probable serine/threonine-protein kinase roco9 OS=Dictyostelium discoideum GN=roco9 PE=3 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 1.610e-12
Identity = 46/133 (34.59%), Postives = 73/133 (54.89%), Query Frame = 1
Query:  454 NLIGKGGYAEVYKGRLRNGQLVAIKRLTRGTA----DEIIADFLSELGIMAHVDHPNTAKLLGYGIEGGMHIVLELSPNGSLASLLYGMKEKLKWGIRYKIALGVAEGLLYLHEGCQRRIIHRDIKAAHILLT 840
            N IG+GG A VYKG+ R    VAIK L          ++ A++  E+  ++   H N   L G+ +E  + I+ E    G+L   ++ +K  L W +R KIA G+A  L  LH+  +  ++HRD+K+ +ILL+
Sbjct: 3012 NPIGEGGTATVYKGKWRQSD-VAIKLLKTDVVGSDFSKVFAEYRREIFCLSSFIHDNILDLKGFCLEP-LAIITEFQSGGNLYDYIHDLKNPLDWQLRIKIAKGIAASLQTLHDS-RPSVVHRDLKSPNILLS 3141          
BLAST of FC929045 vs. ExPASy Swiss-Prot
Match: Y4361_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At4g36180 OS=Arabidopsis thaliana GN=At4g36180 PE=1 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 2.103e-12
Identity = 50/153 (32.68%), Postives = 80/153 (52.29%), Query Frame = 1
Query:  409 SLYELQSATNNFSFENLIGKGGYAEVYKGRLRNGQLVAIKRLTRGTA-DEIIADFLSELGIMAHVDHPNTAKLLGY--GIEGGMHIVLELSPNGSLASLLYGMKEK----LKWGIRYKIALGVAEGLLYLHEGCQRRIIHRDIKAAHILLTED 846
            +L E   AT  F  EN++ +  Y  ++K    +G +++I+RL  G+  +E +  F  E  ++  V H N   L GY  G      +V +  PNG+L++LL     +    L W +R+ IALG+A GL +LH   Q  ++H DIK  ++L   D
Sbjct:  830 TLAETIEATRQFDEENVLSRTRYGLLFKANYNDGMVLSIRRLPNGSLLNENL--FKKEAEVLGKVKHRNITVLRGYYAGPPDLRLLVYDYMPNGNLSTLLQEASHQDGHVLNWPMRHLIALGIARGLGFLH---QSNMVHGDIKPQNVLFDAD 977          
BLAST of FC929045 vs. ExPASy Swiss-Prot
Match: IRAK1_BOVIN (Interleukin-1 receptor-associated kinase 1 OS=Bos taurus GN=IRAK1 PE=2 SV=2)

HSP 1 Score: 73.1738 bits (178), Expect = 2.103e-12
Identity = 50/151 (33.11%), Postives = 79/151 (52.32%), Query Frame = 1
Query:  412 LYELQSATNNFSFENLIGKGGYAEVYKGRLRNGQLVAIKRLTRGTADE---IIADFLSELGIMAHVDHPNTAKLLGYGIEGGMH-IVLELSPNGSLASLLYGMKE---KLKWGIRYKIALGVAEGLLYLHEGCQRRIIHRDIKAAHILLTE 843
            L+E+   T++FS E  IG+GG+  VY+  +RN  + A+KRL      E   +   F +E+  ++   HPN     GY  + G + +V    PNGSL   L+   +    L W  R  I LG A  + +LH+     +IH D+K++++LL E
Sbjct:  202 LHEICQGTHDFSEELKIGEGGFGCVYRAVMRN-TVYAVKRLKEEADLEWTTVKQSFQTEVQQLSRFRHPNIVDFAGYCAQSGFYCLVYGFLPNGSLEDRLHVQTQAWPPLSWPQRLDILLGTARAIQFLHQD-SPSLIHGDVKSSNVLLDE 350          
BLAST of FC929045 vs. ExPASy Swiss-Prot
Match: IMK3_ARATH (Probable leucine-rich repeat receptor-like protein kinase IMK3 OS=Arabidopsis thaliana GN=IMK3 PE=1 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 2.103e-12
Identity = 45/134 (33.58%), Postives = 71/134 (52.99%), Query Frame = 1
Query:  457 LIGKGGYAEVYKGRLRNGQLVAIKRLTRGTADEIIADFLSELGIMAHVDHPNTAKLLGY--GIEGGMHIVLELSPNGSLASLLY--GMKEKLKWGIRYKIALGVAEGLLYLHEGCQRRIIHRDIKAAHILLTED 846
            ++GK  Y  VYK  L +G  VA+KRL R    +   +F +E+ ++  + HPN   L  Y  G +G   +V +    GSLA+ L+  G    + W  R  +  G+A GL YLH      IIH ++ ++++LL E+
Sbjct:  493 IMGKSTYGTVYKATLEDGSQVAVKRL-REKITKSQKEFENEINVLGRIRHPNLLALRAYYLGPKGEKLVVFDYMSRGSLATFLHARGPDVHINWPTRMSLIKGMARGLFYLH--THANIIHGNLTSSNVLLDEN 623          
BLAST of FC929045 vs. ExPASy Swiss-Prot
Match: ERBB4_RAT (Receptor tyrosine-protein kinase erbB-4 OS=Rattus norvegicus GN=Erbb4 PE=2 SV=3)

HSP 1 Score: 73.1738 bits (178), Expect = 2.103e-12
Identity = 43/132 (32.58%), Postives = 74/132 (56.06%), Query Frame = 1
Query:  457 LIGKGGYAEVYKGR-LRNGQLV----AIKRLTRGTADEIIADFLSELGIMAHVDHPNTAKLLGYGIEGGMHIVLELSPNGSLASLLYGMKEKLKWGIRYKIALGVAEGLLYLHEGCQRRIIHRDIKAAHILL 837
            ++G G +  VYKG  +  G+ V    AIK L   T  +   +F+ E  IMA VDHP+  +LLG  +   + +V +L P+G L   ++  K+ +   +     + +A+G++YL E   RR++HRD+ A ++L+
Sbjct:  723 VLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASVDHPHLVRLLGVCLSPTIQLVTQLMPHGCLLEYVHEHKDNIGSQLLLNWCVQIAKGMMYLEE---RRLVHRDLAARNVLV 851          
BLAST of FC929045 vs. ExPASy Swiss-Prot
Match: DRKD_DICDI (Probable serine/threonine-protein kinase drkD OS=Dictyostelium discoideum GN=drkD PE=2 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 2.103e-12
Identity = 48/155 (30.97%), Postives = 80/155 (51.61%), Query Frame = 1
Query:  394 PQKIFSL---YELQSATNNFSFENLIGKGGYAEVYKGRLRNGQLVAIKRLTRGTAD-EIIADFLSELGIMAHVDHPNTAKLLGYGIE-GGMHIVLELSPNGSLASLLYGMKEKLKWGIRYKIALGVAEGLLYLHEGCQRRIIHRDIKAAHILLTE 843
            P KI  +   +E +   +  +    IG+GGY +V++G  R G  VA+K L     + ++I+D   E+ ++  + HPN    +G   E     IV E    GSLA++L     ++ WG+R ++    A G+ YLH      IIHRD+K  ++L+ +
Sbjct:  832 PAKIIEVEKPFEWEVPLSEIAIGARIGRGGYGQVFRGSWR-GTEVAVKMLFNDNVNLKLISDLRKEVDLLCKLRHPNIVLFMGACTEPSSPCIVTEYLSRGSLANILLDESIEMDWGLRLQLGFDCARGMTYLHSR-NPIIIHRDLKTDNLLVDD 984          
BLAST of FC929045 vs. ExPASy Swiss-Prot
Match: DRKC_DICDI (Probable serine/threonine-protein kinase drkC OS=Dictyostelium discoideum GN=drkC PE=3 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 2.103e-12
Identity = 52/136 (38.24%), Postives = 76/136 (55.88%), Query Frame = 1
Query:  451 ENLIGKGGYAEVYKGRLRNGQLVAIKRLTRGTADEIIADFLSELG----IMAHVDHPNTAKLLGY-GIEGGMHIVLELSPNGSLASLLYGMKEKLKWGIRYKIALGVAEGLLYLHEGCQRRIIHRDIKAAHILLTE 843
            +N IG+G  AEV+ G  R G +VAIK+      D+   DFL+EL     IM+ + HPN  + LG       + IV+E  P GSL  +L+     L W     +AL +A+G+ YLH  C   +IHRD+K+ ++L+ E
Sbjct:  494 QNRIGRGSCAEVFTGTWR-GIIVAIKKAKLLNEDD--EDFLNELAQEATIMSQLRHPNICQFLGTCNNPPEILIVMEYMPLGSLYRILHDPSISLDWPRMKSMALDIAKGMNYLH-CCDPIVIHRDLKSHNLLVDE 625          
BLAST of FC929045 vs. ExPASy Swiss-Prot
Match: Y1634_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g63430 OS=Arabidopsis thaliana GN=At1g63430 PE=1 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 2.746e-12
Identity = 53/150 (35.33%), Postives = 76/150 (50.67%), Query Frame = 1
Query:  418 ELQSATNNFSFENLIGKGGYAEVYKGRLRNGQLVAIKRLTRGTAD---EIIADFLSELGIMAHVDHPNTAKLLGYGIEGGMH---IVLELSPNGSLASLL-YGMKEKLKWGIRYKIALGVAEGLLYLHEGCQRRIIHRDIKAAHILLTED 846
            EL+ A  +FS  N+IG    +++YKG L+ G  +A+  L     D    +   F  E+  +A ++H NTAKLLGY  E       +V E + NG+L   L YG    + W  R KI +G+A GL YLH          ++ +  I LTED
Sbjct:  354 ELEVACEDFS--NIIGLSADSQIYKGTLKGGSEIAVISLCVKEEDWTGYLELYFQREVADLARLNHENTAKLLGYCKEISPFTRMLVFEYASNGTLYEHLHYGEAALVSWARRMKIVIGIARGLKYLHMELDPPFTISELSSNAIYLTED 501          
The following BLAST results are available for this feature:
BLAST of FC929045 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 294
Match NameE-valueIdentityDescription
CCR35_ARATH9.438e-1332.00Serine/threonine-protein kinase-like protein At3g5... [more]
Y5694_ARATH1.233e-1234.40Probably inactive leucine-rich repeat receptor-lik... [more]
ROCO9_DICDI1.610e-1234.59Probable serine/threonine-protein kinase roco9 OS=... [more]
Y4361_ARATH2.103e-1232.68Probable LRR receptor-like serine/threonine-protei... [more]
IRAK1_BOVIN2.103e-1233.11Interleukin-1 receptor-associated kinase 1 OS=Bos ... [more]
IMK3_ARATH2.103e-1233.58Probable leucine-rich repeat receptor-like protein... [more]
ERBB4_RAT2.103e-1232.58Receptor tyrosine-protein kinase erbB-4 OS=Rattus ... [more]
DRKD_DICDI2.103e-1230.97Probable serine/threonine-protein kinase drkD OS=D... [more]
DRKC_DICDI2.103e-1238.24Probable serine/threonine-protein kinase drkC OS=D... [more]
Y1634_ARATH2.746e-1235.33Probable LRR receptor-like serine/threonine-protei... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAH1DD03RM2 PhII-IIIV1 Citrus clementina cDNA clone KN0AAH1DD03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC929045 ID=FC929045; Name=FC929045; organism=Citrus clementina; type=EST; length=847bp
ATTTTAGTTTCTTTTTTGACTGAGATAAGAGGACGGGACAAAGAAACAGA
ATTTAGAATGCTCTGTTCTCATCCCCTGTTTCTGGTCCAGATTTTATAAT
ATCTGGACATGGAGAAGAAGGAAGATTCATGCTCGCCGGTTGGGGTTCTT
GAGGACTATTTTCGAAGCGAAGACTCCGAAACATGTTCTTCAAAAGAACC
ATGCTCTGAAACTAAGCCGGAATCCAAATCCAATTCTCGCTGGCATTTAT
TCTACGACTTATTCAGAAACAAATCGAAGAAATCATTAGTCACATTGTAT
CCCCTCAAGCTTTCAATAAGAAGAAGCAGTAGTATGAGAGAGGGCATTGA
TATGCCGAGGAATCTTTTTGTAAATTCCTACGATTCACAGTCTCCCCAGA
AGATTTTCTCCCTCTATGAGCTGCAATCCGCCACCAACAATTTCAGCTTC
GAAAATTTGATTGGAAAGGGAGGTTATGCTGAAGTTTACAAAGGGCGTTT
GAGAAATGGGCAGCTTGTGGCAATCAAACGGCTAACAAGAGGTACAGCAG
ATGAGATTATAGCGGACTTTTTATCGGAGCTTGGGATTATGGCTCATGTC
GATCATCCTAATACTGCTAAGTTATTAGGATATGGGATTGAAGGAGGCAT
GCACATTGTTCTTGAATTGTCTCCTAATGGAAGCTTAGCTTCTCTCCTTT
ATGGTATGAAGGAGAAACTGAAATGGGGTATCAGGTATAAGATTGCGTTA
GGGGTAGCCGAAGGCTTACTTTATCTTCATGAGGGCTGTCAGAGGAGAAT
CATTCATAGAGATATTAAAGCTGCCCATATTTTGCTCACTGAGGACT
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