FC929045

Overview
NameFC929045
Unique NameFC929045
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length847
Libraries
Library NameType
PhII-IIIV1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC929045 vs. ExPASy Swiss-Prot
Match: Y1199_DICDI (Probable serine/threonine-protein kinase DDB_G0282895 OS=Dictyostelium discoideum GN=DDB_G0282895 PE=3 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 2.746e-12
Identity = 52/134 (38.81%), Postives = 72/134 (53.73%), Query Frame = 1
Query:  460 IGKGGYAEVYKGRLRNGQLVAIKRLTRGTADEIIADFLSELGIMAHVDHPNTAKLLGYGIEGGMH-----IVLELSPNGSLASLLYGMKEKLKWGIRYKIALGVAEGLLYLHEGCQRRIIHRDIKAAHILLTED 846
            +G+G  AEV+KG +  G+ VA+K    G+    + DFL E+ I+  + HPN  KL G  I    H     IV EL   G+L  ++    + L      K AL VA+GL YLH       IHRDIKAA+IL+ ++
Sbjct: 1383 LGEGALAEVHKG-IWKGKEVAVKIFNEGSFSFRLEDFLKEVAILGLISHPNLLKLKGACIAPRSHKSTFMIVTELMHKGTLLEVI-NKNKPLSLEDIIKYALSVAQGLAYLH---SVDFIHRDIKAANILVDKN 1511          
BLAST of FC929045 vs. ExPASy Swiss-Prot
Match: TESK2_RAT (Dual specificity testis-specific protein kinase 2 OS=Rattus norvegicus GN=Tesk2 PE=2 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 3.587e-12
Identity = 52/161 (32.30%), Postives = 86/161 (53.42%), Query Frame = 1
Query:  370 VNSYDSQSPQKIFSLYELQSATNNFSFENLIGKGGYAEVYKGRLR-NGQLVAIKRLTRGTADEIIADFLSELGIMAHVDHPNTAKLLGYGI-EGGMHIVLELSPNGSLASLLYGMKEKLKWGIRYKIALGVAEGLLYLHEGCQRRIIHRDIKAAHILLTED 846
            V    S S + I S +   ++ ++F+ E  IG G ++EV+K R R +GQ++A+K     T     A+ L E+ +M  + HPN  + +G  + +G +H + E   +G+L  LL      L W +R K+A  +A GL YLH    + I HRD+ + + L+  D
Sbjct:   35 VGRVSSSSYRAIISAFSRLTSLDDFTREK-IGSGFFSEVFKVRHRASGQVMALKM---NTLSSNRANLLKEMQLMNRLSHPNILRFMGVCVHQGQLHALTEYINSGNLEQLL-DSNLYLPWTVRVKLAYDIAVGLSYLH---FKGIFHRDLTSKNCLIKRD 187          
BLAST of FC929045 vs. ExPASy Swiss-Prot
Match: Y9955_DICDI (Probable serine/threonine-protein kinase DDB_G0267514 OS=Dictyostelium discoideum GN=DDB_G0267514 PE=3 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 4.684e-12
Identity = 51/168 (30.36%), Postives = 87/168 (51.79%), Query Frame = 1
Query:  361 NLFVNSYDSQSP----QKIFSLYELQSATNNFSFENLIGKGGYAEVYKGRLRNGQLVAIK--RLTRGTADEIIADFLSELGIMAHVDHPNTAKLLGY-GIEGGMHIVLELSPNGSLASLLYGMKEKLKWGIRYKIALGVAEGLLYLHEGCQRRIIHRDIKAAHILLTE 843
            N+  NS     P    Q+ FS  +++ + +     + +G+G +  VYKG  R G  VAIK  ++     ++++ +F  EL I++ + HPN   L+        +  + E  P GSL   L+  K K+   +  K+A+ +A+G+ YLH      +IHRDIK+ ++LL E
Sbjct:  633 NILKNSGSVVEPPSQQQQYFS--DIEISFSELKISSKLGEGTFGVVYKGLWR-GSSVAIKQIKINEDVNNQVLEEFRKELTILSRLRHPNIVLLMAACTAPPNLCFITEYLPGGSLYDALHSKKIKMNMQLYKKLAIQIAQGMNYLH---LSGVIHRDIKSLNLLLDE 794          
BLAST of FC929045 vs. ExPASy Swiss-Prot
Match: TESK2_MOUSE (Dual specificity testis-specific protein kinase 2 OS=Mus musculus GN=Tesk2 PE=2 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 4.684e-12
Identity = 52/161 (32.30%), Postives = 86/161 (53.42%), Query Frame = 1
Query:  370 VNSYDSQSPQKIFSLYELQSATNNFSFENLIGKGGYAEVYKGRLR-NGQLVAIKRLTRGTADEIIADFLSELGIMAHVDHPNTAKLLGYGI-EGGMHIVLELSPNGSLASLLYGMKEKLKWGIRYKIALGVAEGLLYLHEGCQRRIIHRDIKAAHILLTED 846
            V    S S + I S +   ++ ++F+ E  IG G ++EV+K R R +GQ++A+K     T     A+ L E+ +M  + HPN  + +G  + +G +H + E   +G+L  LL      L W +R K+A  +A GL YLH    + I HRD+ + + L+  D
Sbjct:   35 VGRVSSSSYRAIISAFSRLTSLDDFTREK-IGSGFFSEVFKVRHRASGQVMALKM---NTLSSNRANLLKEMQLMNRLSHPNILRFMGVCVHQGQLHALTEYINSGNLEQLL-DSDLYLPWTVRVKLAYDIAVGLSYLH---FKGIFHRDLTSKNCLIKRD 187          
BLAST of FC929045 vs. ExPASy Swiss-Prot
Match: ERBB4_MOUSE (Receptor tyrosine-protein kinase erbB-4 OS=Mus musculus GN=Erbb4 PE=1 SV=3)

HSP 1 Score: 72.0182 bits (175), Expect = 4.684e-12
Identity = 42/132 (31.82%), Postives = 74/132 (56.06%), Query Frame = 1
Query:  457 LIGKGGYAEVYKGR-LRNGQLV----AIKRLTRGTADEIIADFLSELGIMAHVDHPNTAKLLGYGIEGGMHIVLELSPNGSLASLLYGMKEKLKWGIRYKIALGVAEGLLYLHEGCQRRIIHRDIKAAHILL 837
            ++G G +  VYKG  +  G+ V    AIK L   T  +   +F+ E  IMA +DHP+  +LLG  +   + +V +L P+G L   ++  K+ +   +     + +A+G++YL E   RR++HRD+ A ++L+
Sbjct:  723 VLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLVRLLGVCLSPTIQLVTQLMPHGCLLDYVHEHKDNIGSQLLLNWCVQIAKGMMYLEE---RRLVHRDLAARNVLV 851          
BLAST of FC929045 vs. ExPASy Swiss-Prot
Match: ERBB4_HUMAN (Receptor tyrosine-protein kinase erbB-4 OS=Homo sapiens GN=ERBB4 PE=1 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 4.684e-12
Identity = 42/132 (31.82%), Postives = 74/132 (56.06%), Query Frame = 1
Query:  457 LIGKGGYAEVYKGR-LRNGQLV----AIKRLTRGTADEIIADFLSELGIMAHVDHPNTAKLLGYGIEGGMHIVLELSPNGSLASLLYGMKEKLKWGIRYKIALGVAEGLLYLHEGCQRRIIHRDIKAAHILL 837
            ++G G +  VYKG  +  G+ V    AIK L   T  +   +F+ E  IMA +DHP+  +LLG  +   + +V +L P+G L   ++  K+ +   +     + +A+G++YL E   RR++HRD+ A ++L+
Sbjct:  723 VLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLVRLLGVCLSPTIQLVTQLMPHGCLLEYVHEHKDNIGSQLLLNWCVQIAKGMMYLEE---RRLVHRDLAARNVLV 851          
BLAST of FC929045 vs. ExPASy Swiss-Prot
Match: CDC7_SCHPO (Cell division control protein 7 OS=Schizosaccharomyces pombe GN=cdc7 PE=1 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 4.684e-12
Identity = 48/143 (33.57%), Postives = 79/143 (55.24%), Query Frame = 1
Query:  436 NNFSFENLIGKGGYAEVYKG-RLRNGQLVAIKRLTRGTADEIIADFLS----ELGIMAHVDHPNTAKLLG-YGIEGGMHIVLELSPNGSLASLLYGMKEKLKWGIRYKIALGVAEGLLYLHEGCQRRIIHRDIKAAHILLTED 846
            ++ +  + +GKG +  VY+G  ++NG+ VA+K++      +++   LS    E+ ++ ++DHPN  K  G Y     + I+LE   NGSL S+      K+   +       V +GLLYLH    + +IHRDIK A+IL T+D
Sbjct:    7 SSITLGDCLGKGAFGAVYRGLNIKNGETVAVKKVK---LSKMLKSDLSVIKMEIDLLKNLDHPNIVKYRGSYQTNDSLCIILEYCENGSLRSICKNFG-KIPENLVALYTFQVLQGLLYLHN---QGVIHRDIKGANILTTKD 142          
BLAST of FC929045 vs. ExPASy Swiss-Prot
Match: RLK90_ARATH (Probable inactive receptor kinase RLK902 OS=Arabidopsis thaliana GN=RLK902 PE=1 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 7.990e-12
Identity = 53/152 (34.87%), Postives = 78/152 (51.32%), Query Frame = 1
Query:  400 KIFSLYELQSATNNFSFENLIGKGGYAEVYKGRLRNGQLVAIKRLTRGTADEIIADFLSELGIMAHVDHPNTAKLLGYGIEGGMHI-VLELSPNGSLASLLYGMK----EKLKWGIRYKIALGVAEGLLYLHEGCQRRIIHRDIKAAHILLT 840
            K+F L +L  A+       ++GKG +   YK  L    LVA+KRL   T  +   +F  ++ ++  +DH N   L  Y   G   + V +  P GSL++LL+G K      L W +R  IALG A GL YLH        H ++K+++ILLT
Sbjct:  356 KVFDLEDLLRAS-----AEVLGKGTFGTAYKAVLDAVTLVAVKRLKDVTMAD--REFKEKIEVVGAMDHENLVPLRAYYYSGDEKLLVYDFMPMGSLSALLHGNKGAGRPPLNWEVRSGIALGAARGLDYLHSQ-DPLSSHGNVKSSNILLT 499          
BLAST of FC929045 vs. ExPASy Swiss-Prot
Match: Y9963_DICDI (Probable serine/threonine-protein kinase DDB_G0272254 OS=Dictyostelium discoideum GN=DDB_G0272254 PE=3 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 1.044e-11
Identity = 44/143 (30.77%), Postives = 80/143 (55.94%), Query Frame = 1
Query:  436 NNFSFENLIGKGGYAEVYKGRLRNGQLVAIKRLTRG---TADEIIADFLSELGIMAHVDHPNTAKLLGYGIEGGMHIVLELSPNGSLASLLYGMKEKLKWGIR------YKIALGVAEGLLYLHEGCQRRIIHRDIKAAHILL 837
            ++   +  IGKG +++V KG  + G+ VA+K+L        +E+I +F +E+ ++  + HPN     GY +   M IV+E  P+G+L  L++    + +  I+        IA  +A G+ +LH    R IIHRD+K++++L+
Sbjct: 1071 SDIKIDKEIGKGHFSKVLKGNWK-GKDVAVKKLNSNKDKAREEMIQEFKAEVELLGSLQHPNLVTCYGYSL-NPMCIVMEFLPSGNLFELIHSKPSEQQQSIKLDSTLILAIAFDIARGMQHLH---TRNIIHRDLKSSNLLM 1208          
BLAST of FC929045 vs. ExPASy Swiss-Prot
Match: Y9851_DICDI (Probable serine/threonine-protein kinase DDB_G0275165 OS=Dictyostelium discoideum GN=DDB_G0275165 PE=3 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 1.044e-11
Identity = 46/138 (33.33%), Postives = 76/138 (55.07%), Query Frame = 1
Query:  454 NLIGKGGYAEVYKGRLRNGQLVAIKRLTRGTAD---EIIADFLS-ELGIMAHVDHPNTAKLLGYGI---EGGMHIVLELSPNGSLASLLYGMKEKLKWGIRYKIALGVAEGLLYLHEGCQRRIIHRDIKAAHILLTED 846
            ++IG GG+ +VY+G L NG+ + IK++T    D   +I+  FL  E+  +  + HPN  K   YGI   E  + ++ EL   G L   +      + W ++ KIA  +A  + YLHE     +IHRD+K+ ++L+ E+
Sbjct:   27 SIIGSGGFGKVYQGVL-NGKEIGIKKITISDNDPNRDILLKFLEREIYTLKMLSHPNVIKF--YGIAEKERSLFLLTELVSGGDLHWYIKNKSIDITWKLKVKIARDIAASMAYLHE---NGVIHRDLKSTNLLVAEN 158          
The following BLAST results are available for this feature:
BLAST of FC929045 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 294
Match NameE-valueIdentityDescription
Y1199_DICDI2.746e-1238.81Probable serine/threonine-protein kinase DDB_G0282... [more]
TESK2_RAT3.587e-1232.30Dual specificity testis-specific protein kinase 2 ... [more]
Y9955_DICDI4.684e-1230.36Probable serine/threonine-protein kinase DDB_G0267... [more]
TESK2_MOUSE4.684e-1232.30Dual specificity testis-specific protein kinase 2 ... [more]
ERBB4_MOUSE4.684e-1231.82Receptor tyrosine-protein kinase erbB-4 OS=Mus mus... [more]
ERBB4_HUMAN4.684e-1231.82Receptor tyrosine-protein kinase erbB-4 OS=Homo sa... [more]
CDC7_SCHPO4.684e-1233.57Cell division control protein 7 OS=Schizosaccharom... [more]
RLK90_ARATH7.990e-1234.87Probable inactive receptor kinase RLK902 OS=Arabid... [more]
Y9963_DICDI1.044e-1130.77Probable serine/threonine-protein kinase DDB_G0272... [more]
Y9851_DICDI1.044e-1133.33Probable serine/threonine-protein kinase DDB_G0275... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAH1DD03RM2 PhII-IIIV1 Citrus clementina cDNA clone KN0AAH1DD03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC929045 ID=FC929045; Name=FC929045; organism=Citrus clementina; type=EST; length=847bp
ATTTTAGTTTCTTTTTTGACTGAGATAAGAGGACGGGACAAAGAAACAGA
ATTTAGAATGCTCTGTTCTCATCCCCTGTTTCTGGTCCAGATTTTATAAT
ATCTGGACATGGAGAAGAAGGAAGATTCATGCTCGCCGGTTGGGGTTCTT
GAGGACTATTTTCGAAGCGAAGACTCCGAAACATGTTCTTCAAAAGAACC
ATGCTCTGAAACTAAGCCGGAATCCAAATCCAATTCTCGCTGGCATTTAT
TCTACGACTTATTCAGAAACAAATCGAAGAAATCATTAGTCACATTGTAT
CCCCTCAAGCTTTCAATAAGAAGAAGCAGTAGTATGAGAGAGGGCATTGA
TATGCCGAGGAATCTTTTTGTAAATTCCTACGATTCACAGTCTCCCCAGA
AGATTTTCTCCCTCTATGAGCTGCAATCCGCCACCAACAATTTCAGCTTC
GAAAATTTGATTGGAAAGGGAGGTTATGCTGAAGTTTACAAAGGGCGTTT
GAGAAATGGGCAGCTTGTGGCAATCAAACGGCTAACAAGAGGTACAGCAG
ATGAGATTATAGCGGACTTTTTATCGGAGCTTGGGATTATGGCTCATGTC
GATCATCCTAATACTGCTAAGTTATTAGGATATGGGATTGAAGGAGGCAT
GCACATTGTTCTTGAATTGTCTCCTAATGGAAGCTTAGCTTCTCTCCTTT
ATGGTATGAAGGAGAAACTGAAATGGGGTATCAGGTATAAGATTGCGTTA
GGGGTAGCCGAAGGCTTACTTTATCTTCATGAGGGCTGTCAGAGGAGAAT
CATTCATAGAGATATTAAAGCTGCCCATATTTTGCTCACTGAGGACT
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