FC929045

Overview
NameFC929045
Unique NameFC929045
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length847
Libraries
Library NameType
PhII-IIIV1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC929045 vs. ExPASy Swiss-Prot
Match: EPHB1_RAT (Ephrin type-B receptor 1 OS=Rattus norvegicus GN=Ephb1 PE=2 SV=2)

HSP 1 Score: 70.8626 bits (172), Expect = 1.044e-11
Identity = 50/166 (30.12%), Postives = 80/166 (48.19%), Query Frame = 1
Query:  364 LFVNSYDSQSPQKIFSLYELQSATNNFSFENLIGKGGYAEVYKGRLR----NGQLVAIKRLTRGTADEIIADFLSELGIMAHVDHPNTAKLLGYGIEG-GMHIVLELSPNGSLASLLYGMKEKLKWGIRYKIALGVAEGLLYLHEGCQRRIIHRDIKAAHILLTED 846
            ++++ +  + P +    +  +   +    E +IG G + EVYKGRL+        VAIK L  G +++   DFLSE  IM   DHPN  +L G   +   + I+ E   NG+L S L     +        +  G+A G+ YL E      +HRD+ A +IL+  +
Sbjct:  593 IYIDPFTYEDPNEAVREFAKEIDVSFVKIEEVIGAGEFGEVYKGRLKLPGKREIYVAIKTLKAGYSEKQRRDFLSEASIMGQFDHPNIIRLEGVVTKSRPVMIITEFMENGALDSFLRQNDGQFTVIQLVGMLRGIAAGMKYLSE---MNYVHRDLAARNILVNSN 755          
BLAST of FC929045 vs. ExPASy Swiss-Prot
Match: EPHB1_MOUSE (Ephrin type-B receptor 1 OS=Mus musculus GN=Ephb1 PE=2 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 1.044e-11
Identity = 50/166 (30.12%), Postives = 80/166 (48.19%), Query Frame = 1
Query:  364 LFVNSYDSQSPQKIFSLYELQSATNNFSFENLIGKGGYAEVYKGRLR----NGQLVAIKRLTRGTADEIIADFLSELGIMAHVDHPNTAKLLGYGIEG-GMHIVLELSPNGSLASLLYGMKEKLKWGIRYKIALGVAEGLLYLHEGCQRRIIHRDIKAAHILLTED 846
            ++++ +  + P +    +  +   +    E +IG G + EVYKGRL+        VAIK L  G +++   DFLSE  IM   DHPN  +L G   +   + I+ E   NG+L S L     +        +  G+A G+ YL E      +HRD+ A +IL+  +
Sbjct:  593 IYIDPFTYEDPNEAVREFAKEIDVSFVKIEEVIGAGEFGEVYKGRLKLPGKREIYVAIKTLKAGYSEKQRRDFLSEASIMGQFDHPNIIRLEGVVTKSRPVMIITEFMENGALDSFLRQNDGQFTVIQLVGMLRGIAAGMKYLSE---MNYVHRDLAARNILVNSN 755          
BLAST of FC929045 vs. ExPASy Swiss-Prot
Match: TMKL1_ARATH (Putative kinase-like protein TMKL1 OS=Arabidopsis thaliana GN=TMKL1 PE=1 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 1.363e-11
Identity = 44/131 (33.59%), Postives = 70/131 (53.44%), Query Frame = 1
Query:  466 KGGYAEVYKGRLRNGQLVAIKRLTRGTADEIIADFLSELGIMAHVDHPNTAKLLGY--GIEGGMHIVLELSPNGSLASLLYGMKEK---LKWGIRYKIALGVAEGLLYLHEGCQRRIIHRDIKAAHILLTE 843
            K  Y  VYK +L +G  +A++ L  GT  +  +  L  +  +  + H N   L  +  G  G   ++ +  PN SL  LL+  K +   L W  R+KIALG+A GL YLH G +  IIH +I++ ++L+ +
Sbjct:  381 KTSYGTVYKAKLSDGGNIALRLLREGTCKDR-SSCLPVIRQLGRIRHENLVPLRAFYQGKRGEKLLIYDYLPNISLHDLLHESKPRKPALNWARRHKIALGIARGLAYLHTGQEVPIIHGNIRSKNVLVDD 510          
BLAST of FC929045 vs. ExPASy Swiss-Prot
Match: EPHB1_HUMAN (Ephrin type-B receptor 1 OS=Homo sapiens GN=EPHB1 PE=1 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 1.363e-11
Identity = 50/166 (30.12%), Postives = 80/166 (48.19%), Query Frame = 1
Query:  364 LFVNSYDSQSPQKIFSLYELQSATNNFSFENLIGKGGYAEVYKGRLR----NGQLVAIKRLTRGTADEIIADFLSELGIMAHVDHPNTAKLLGYGIEG-GMHIVLELSPNGSLASLLYGMKEKLKWGIRYKIALGVAEGLLYLHEGCQRRIIHRDIKAAHILLTED 846
            ++++ +  + P +    +  +   +    E +IG G + EVYKGRL+        VAIK L  G +++   DFLSE  IM   DHPN  +L G   +   + I+ E   NG+L S L     +        +  G+A G+ YL E      +HRD+ A +IL+  +
Sbjct:  593 IYIDPFTYEDPNEAVREFAKEIDVSFVKIEEVIGAGEFGEVYKGRLKLPGKREIYVAIKTLKAGYSEKQRRDFLSEASIMGQFDHPNIIRLEGVVTKSRPVMIITEFMENGALDSFLRQNDGQFTVIQLVGMLRGIAAGMKYLAE---MNYVHRDLAARNILVNSN 755          
BLAST of FC929045 vs. ExPASy Swiss-Prot
Match: EPHB1_CHICK (Ephrin type-B receptor 1 (Fragment) OS=Gallus gallus GN=EPHB1 PE=2 SV=2)

HSP 1 Score: 70.4774 bits (171), Expect = 1.363e-11
Identity = 50/166 (30.12%), Postives = 80/166 (48.19%), Query Frame = 1
Query:  364 LFVNSYDSQSPQKIFSLYELQSATNNFSFENLIGKGGYAEVYKGRLR----NGQLVAIKRLTRGTADEIIADFLSELGIMAHVDHPNTAKLLGYGIEG-GMHIVLELSPNGSLASLLYGMKEKLKWGIRYKIALGVAEGLLYLHEGCQRRIIHRDIKAAHILLTED 846
            ++++ +  + P +    +  +   +    E +IG G + EVYKGRL+        VAIK L  G +++   DFLSE  IM   DHPN  +L G   +   + I+ E   NG+L S L     +        +  G+A G+ YL E      +HRD+ A +IL+  +
Sbjct:  593 IYIDPFTYEDPNEAVREFAKEIDVSFVKIEEVIGAGEFGEVYKGRLKLPGKREIYVAIKTLKAGYSEKQRRDFLSEASIMGQFDHPNIIRLEGVVTKSRPVMIITEFMENGALDSFLRQNDGQFTVIQLVGMLRGIAAGMKYLAE---MNYVHRDLAARNILVNSN 755          
BLAST of FC929045 vs. ExPASy Swiss-Prot
Match: EPB1B_XENLA (Ephrin type-B receptor 1-B (Fragment) OS=Xenopus laevis GN=ephb1-B PE=2 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 1.363e-11
Identity = 50/166 (30.12%), Postives = 80/166 (48.19%), Query Frame = 1
Query:  364 LFVNSYDSQSPQKIFSLYELQSATNNFSFENLIGKGGYAEVYKGRLRNGQL----VAIKRLTRGTADEIIADFLSELGIMAHVDHPNTAKLLGYGIEG-GMHIVLELSPNGSLASLLYGMKEKLKWGIRYKIALGVAEGLLYLHEGCQRRIIHRDIKAAHILLTED 846
            ++++ +  + P +    +  +   +    E +IG G + EVYKGRL+        VAIK L  G +++   DFLSE  IM   DHPN  +L G   +   + I+ E   NG+L S L     +        +  G+A G+ YL E      +HRD+ A +IL+  +
Sbjct:  511 IYIDPFTYEDPNEAVREFAKEIDVSFVKIEEVIGAGEFGEVYKGRLKLPSKREISVAIKTLKAGYSEKQRRDFLSEASIMGQFDHPNIIRLEGVVTKSRPVMIITEFMENGALDSFLRQNDGQFTVIQLVGMLRGIAAGMKYLSE---MNYVHRDLAARNILVNSN 673          
BLAST of FC929045 vs. ExPASy Swiss-Prot
Match: EPB1A_XENLA (Ephrin type-B receptor 1-A OS=Xenopus laevis GN=ephb1-A PE=2 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 1.363e-11
Identity = 50/166 (30.12%), Postives = 80/166 (48.19%), Query Frame = 1
Query:  364 LFVNSYDSQSPQKIFSLYELQSATNNFSFENLIGKGGYAEVYKGRLRNGQL----VAIKRLTRGTADEIIADFLSELGIMAHVDHPNTAKLLGYGIEG-GMHIVLELSPNGSLASLLYGMKEKLKWGIRYKIALGVAEGLLYLHEGCQRRIIHRDIKAAHILLTED 846
            ++++ +  + P +    +  +   +    E +IG G + EVYKGRL+        VAIK L  G +++   DFLSE  IM   DHPN  +L G   +   + I+ E   NG+L S L     +        +  G+A G+ YL E      +HRD+ A +IL+  +
Sbjct:  594 IYIDPFTYEDPNEAVREFAKEIDVSFVKIEEVIGAGEFGEVYKGRLKLPSKREISVAIKTLKAGYSEKQRRDFLSEASIMGQFDHPNIIRLEGVVTKSRPVMIITEFMENGALDSFLRQNDGQFTVIQLVGMLRGIAAGMKYLSE---MNYVHRDLAARNILVNSN 756          
BLAST of FC929045 vs. ExPASy Swiss-Prot
Match: XMRK_XIPMA (Melanoma receptor tyrosine-protein kinase OS=Xiphophorus maculatus GN=xmrk PE=2 SV=2)

HSP 1 Score: 70.0922 bits (170), Expect = 1.780e-11
Identity = 44/139 (31.65%), Postives = 77/139 (55.40%), Query Frame = 1
Query:  442 FSFENLIGKGGYAEVYKGRLR-NGQL----VAIKRLTRGTADEIIADFLSELGIMAHVDHPNTAKLLGYGIEGGMHIVLELSPNGSLASLLYGMKEKL--KWGIRYKIALGVAEGLLYLHEGCQRRIIHRDIKAAHILL 837
            F  + ++G G +  VYKG    +G+     VAIK L   T+ ++  + L E  +MA VDHP+  +LLG  +   + +V +L P G L   +   +E++  +W + +   + +A+G+ YL E   R ++HRD+ A ++LL
Sbjct:  710 FKKDRVLGSGAFGTVYKGLWNPDGENIRIPVAIKVLREATSPKVNQEVLDEAYVMASVDHPHVCRLLGICLTSAVQLVTQLMPYGCLLDYVRQHQERICGQWLLNW--CVQIAKGMNYLEE---RHLVHRDLAARNVLL 843          
BLAST of FC929045 vs. ExPASy Swiss-Prot
Match: STK10_MOUSE (Serine/threonine-protein kinase 10 OS=Mus musculus GN=Stk10 PE=1 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 1.780e-11
Identity = 39/128 (30.47%), Postives = 72/128 (56.25%), Query Frame = 1
Query:  460 IGKGGYAEVYKGRLRNGQLVAIKRLTRGTADEIIADFLSELGIMAHVDHPNTAKLLG-YGIEGGMHIVLELSPNGSLASLLYGMKEKLKWGIRYKIALGVAEGLLYLHEGCQRRIIHRDIKAAHILLT 840
            +G G + +VYK + +    +A  ++    ++E + D++ E+ I+A  DHP   KLLG Y  +G + I++E  P G++ +++  +   L       +   + E L +LH    +RIIHRD+KA ++L+T
Sbjct:   42 LGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYYYDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQVVCRQMLEALNFLH---GKRIIHRDLKAGNVLMT 166          
BLAST of FC929045 vs. ExPASy Swiss-Prot
Match: STK10_HUMAN (Serine/threonine-protein kinase 10 OS=Homo sapiens GN=STK10 PE=1 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 1.780e-11
Identity = 39/128 (30.47%), Postives = 72/128 (56.25%), Query Frame = 1
Query:  460 IGKGGYAEVYKGRLRNGQLVAIKRLTRGTADEIIADFLSELGIMAHVDHPNTAKLLG-YGIEGGMHIVLELSPNGSLASLLYGMKEKLKWGIRYKIALGVAEGLLYLHEGCQRRIIHRDIKAAHILLT 840
            +G G + +VYK + +    +A  ++    ++E + D++ E+ I+A  DHP   KLLG Y  +G + I++E  P G++ +++  +   L       +   + E L +LH    +RIIHRD+KA ++L+T
Sbjct:   42 LGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYYHDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQVVCRQMLEALNFLH---SKRIIHRDLKAGNVLMT 166          
The following BLAST results are available for this feature:
BLAST of FC929045 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 294
Match NameE-valueIdentityDescription
EPHB1_RAT1.044e-1130.12Ephrin type-B receptor 1 OS=Rattus norvegicus GN=E... [more]
EPHB1_MOUSE1.044e-1130.12Ephrin type-B receptor 1 OS=Mus musculus GN=Ephb1 ... [more]
TMKL1_ARATH1.363e-1133.59Putative kinase-like protein TMKL1 OS=Arabidopsis ... [more]
EPHB1_HUMAN1.363e-1130.12Ephrin type-B receptor 1 OS=Homo sapiens GN=EPHB1 ... [more]
EPHB1_CHICK1.363e-1130.12Ephrin type-B receptor 1 (Fragment) OS=Gallus gall... [more]
EPB1B_XENLA1.363e-1130.12Ephrin type-B receptor 1-B (Fragment) OS=Xenopus l... [more]
EPB1A_XENLA1.363e-1130.12Ephrin type-B receptor 1-A OS=Xenopus laevis GN=ep... [more]
XMRK_XIPMA1.780e-1131.65Melanoma receptor tyrosine-protein kinase OS=Xipho... [more]
STK10_MOUSE1.780e-1130.47Serine/threonine-protein kinase 10 OS=Mus musculus... [more]
STK10_HUMAN1.780e-1130.47Serine/threonine-protein kinase 10 OS=Homo sapiens... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAH1DD03RM2 PhII-IIIV1 Citrus clementina cDNA clone KN0AAH1DD03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC929045 ID=FC929045; Name=FC929045; organism=Citrus clementina; type=EST; length=847bp
ATTTTAGTTTCTTTTTTGACTGAGATAAGAGGACGGGACAAAGAAACAGA
ATTTAGAATGCTCTGTTCTCATCCCCTGTTTCTGGTCCAGATTTTATAAT
ATCTGGACATGGAGAAGAAGGAAGATTCATGCTCGCCGGTTGGGGTTCTT
GAGGACTATTTTCGAAGCGAAGACTCCGAAACATGTTCTTCAAAAGAACC
ATGCTCTGAAACTAAGCCGGAATCCAAATCCAATTCTCGCTGGCATTTAT
TCTACGACTTATTCAGAAACAAATCGAAGAAATCATTAGTCACATTGTAT
CCCCTCAAGCTTTCAATAAGAAGAAGCAGTAGTATGAGAGAGGGCATTGA
TATGCCGAGGAATCTTTTTGTAAATTCCTACGATTCACAGTCTCCCCAGA
AGATTTTCTCCCTCTATGAGCTGCAATCCGCCACCAACAATTTCAGCTTC
GAAAATTTGATTGGAAAGGGAGGTTATGCTGAAGTTTACAAAGGGCGTTT
GAGAAATGGGCAGCTTGTGGCAATCAAACGGCTAACAAGAGGTACAGCAG
ATGAGATTATAGCGGACTTTTTATCGGAGCTTGGGATTATGGCTCATGTC
GATCATCCTAATACTGCTAAGTTATTAGGATATGGGATTGAAGGAGGCAT
GCACATTGTTCTTGAATTGTCTCCTAATGGAAGCTTAGCTTCTCTCCTTT
ATGGTATGAAGGAGAAACTGAAATGGGGTATCAGGTATAAGATTGCGTTA
GGGGTAGCCGAAGGCTTACTTTATCTTCATGAGGGCTGTCAGAGGAGAAT
CATTCATAGAGATATTAAAGCTGCCCATATTTTGCTCACTGAGGACT
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