FC929045

Overview
NameFC929045
Unique NameFC929045
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length847
Libraries
Library NameType
PhII-IIIV1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC929045 vs. ExPASy Swiss-Prot
Match: Y1848_ARATH (Probable inactive receptor kinase At1g48480 OS=Arabidopsis thaliana GN=RKL1 PE=1 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 3.036e-11
Identity = 53/156 (33.97%), Postives = 83/156 (53.21%), Query Frame = 1
Query:  400 KIFSLYELQSATNNFSFENLIGKGGYAEVYKGRLRNGQLVAIKRLTRGTADEIIAD--FLSELGIMAHVDHPNTAKLLGYGIEGGMHI-VLELSPNGSLASLLYGMK----EKLKWGIRYKIALGVAEGLLYLH-EGCQRRIIHRDIKAAHILLTE 843
            K+F L +L  A+       ++GKG +   YK  L    +VA+KRL     D ++AD  F  ++ ++  +DH N   L  Y       + V +  P GSL++LL+G +      L W +R +IA+G A GL YLH +G      H +IK+++ILLT+
Sbjct:  362 KVFDLEDLLRAS-----AEVLGKGTFGTAYKAVLDAVTVVAVKRLK----DVMMADKEFKEKIELVGAMDHENLVPLRAYYFSRDEKLLVYDFMPMGSLSALLHGNRGAGRSPLNWDVRSRIAIGAARGLDYLHSQGTSTS--HGNIKSSNILLTK 506          
BLAST of FC929045 vs. ExPASy Swiss-Prot
Match: PLK4_NEMVE (Serine/threonine-protein kinase PLK4 OS=Nematostella vectensis GN=v1g246408 PE=3 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 3.036e-11
Identity = 50/140 (35.71%), Postives = 75/140 (53.57%), Query Frame = 1
Query:  439 NFSFENLIGKGGYAEVYKGR-LRNGQLVAIKRLTRGTADE--IIADFLSELGIMAHVDHPNTAKLLGYGIEGG-MHIVLELSPNGSLASLLYGMKEKLKWGIRYKIALGVAEGLLYLHEGCQRRIIHRDIKAAHILLTED 846
            +F   +L+GKGG+A VY+GR L  GQ VAIK + +       ++    +E+ I   + HP+  +L  Y  +   +++VLEL+ NG     L      LK     +I L V +G+LYLH      IIHRD+   +ILL+ D
Sbjct:   12 DFQVLDLLGKGGFACVYRGRCLATGQEVAIKMIDKKAMRTAGMVNRVCNEVEIHCRLKHPSILELYTYFEDDNYVYLVLELAENGEANRYLRKQGHTLKESEVRRIMLQVVKGVLYLH---SHGIIHRDLSLGNILLSSD 148          
BLAST of FC929045 vs. ExPASy Swiss-Prot
Match: TESK2_HUMAN (Dual specificity testis-specific protein kinase 2 OS=Homo sapiens GN=TESK2 PE=2 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 3.965e-11
Identity = 49/154 (31.82%), Postives = 83/154 (53.90%), Query Frame = 1
Query:  391 SPQKIFSLYELQSATNNFSFENLIGKGGYAEVYKGRLR-NGQLVAIKRLTRGTADEIIADFLSELGIMAHVDHPNTAKLLGYGI-EGGMHIVLELSPNGSLASLLYGMKEKLKWGIRYKIALGVAEGLLYLHEGCQRRIIHRDIKAAHILLTED 846
            S + + S +   +  ++F+ E  IG G ++EV+K R R +GQ++A+K     T     A+ L E+ +M  + HPN  + +G  + +G +H + E   +G+L  LL      L W +R K+A  +A GL YLH    + I HRD+ + + L+  D
Sbjct:   42 SYRALISAFSRLTRLDDFTCEK-IGSGFFSEVFKVRHRASGQVMALKM---NTLSSNRANMLKEVQLMNRLSHPNILRFMGVCVHQGQLHALTEYINSGNLEQLL-DSNLHLPWTVRVKLAYDIAVGLSYLH---FKGIFHRDLTSKNCLIKRD 187          
BLAST of FC929045 vs. ExPASy Swiss-Prot
Match: SLK_HUMAN (STE20-like serine/threonine-protein kinase OS=Homo sapiens GN=SLK PE=1 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 3.965e-11
Identity = 38/130 (29.23%), Postives = 71/130 (54.62%), Query Frame = 1
Query:  460 IGKGGYAEVYKGRLRNGQLVAIKRLTRGTADEIIADFLSELGIMAHVDHPNTAKLL-GYGIEGGMHIVLELSPNGSLASLLYGMKEKLKWGIRYKIALGVAEGLLYLHEGCQRRIIHRDIKAAHILLTED 846
            +G G + +VYK + +   ++A  ++    ++E + D++ E+ I+A  DHPN  KLL  +  E  + I++E    G++ +++  ++  L       +     + L YLH+    +IIHRD+KA +IL T D
Sbjct:   40 LGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLHD---NKIIHRDLKAGNILFTLD 166          
BLAST of FC929045 vs. ExPASy Swiss-Prot
Match: 7TMK1_DICDI (Seven transmembrane domain-containing tyrosine-protein kinase 1 OS=Dictyostelium discoideum GN=7tmk1 PE=3 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 3.965e-11
Identity = 50/146 (34.25%), Postives = 76/146 (52.05%), Query Frame = 1
Query:  436 NNFSFENLIGKGGYAEVYKGRLRNGQLVAIK-------RLTRGTADEIIADFLSELGIMAHVDHPNTAKLLGYGIEGGMH-IVLELSPNGSLASLLYGMKEKLKWG--IRYKIALGVAEGLLYLHEGCQRRIIHRDIKAAHILLTE 843
            N F F  +IG+G + EV K  +  G +VA+K       R T G  +E +  FL E+ I++ + HPN  + LG   E  ++ IV E    GSL  LL      +K    + + +A+ +A G+ YLH+     I+HRD+   +ILL E
Sbjct:  361 NEFKFGQVIGEGYFGEVRKA-VWKGAVVAVKILHRNSFRNTDGNKEENV--FLKEVAILSILRHPNVLQFLGVCSETNLNGIVTEYMGGGSLDRLLTDRYFLIKQNPILAWNMAISIARGMFYLHDWKPNPILHRDLSTKNILLDE 503          
BLAST of FC929045 vs. ExPASy Swiss-Prot
Match: YR826_MIMIV (Putative serine/threonine-protein kinase/receptor R826 OS=Acanthamoeba polyphaga mimivirus GN=MIMI_R826 PE=4 SV=2)

HSP 1 Score: 68.5514 bits (166), Expect = 5.179e-11
Identity = 44/131 (33.59%), Postives = 70/131 (53.44%), Query Frame = 1
Query:  460 IGKGGYAEVYKGRLRNGQLVAIKRLTRGTADEI-IADFLSELGIMAHVDHPNTAKLLGYGIEG-GMHIVLELSPNGSLASLLYGMKEKLKWGIRYKIALGVAEGLLYLHEGCQRRIIHRDIKAAHILLTED 846
            IG G Y  VY+G+ +N   VAIK+  +   DE  +     E+  +  + HPN   ++G  ++   + IV E    G+L   +     KL+W  + KI + +A+G+ YLH      IIHRDIK ++IL+ E+
Sbjct: 1405 IGLGSYGVVYRGKWKNVD-VAIKKFIKQKIDENHLLGIREEIAFLKKLHHPNIITMVGASLKKPNICIVTEYMAKGNLRDAMRTCTPKLEWHQKIKILVNIAKGISYLH-SFDPPIIHRDIKPSNILIDEN 1533          
BLAST of FC929045 vs. ExPASy Swiss-Prot
Match: Y2278_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At2g02780 OS=Arabidopsis thaliana GN=At2g02780 PE=2 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 6.764e-11
Identity = 48/162 (29.63%), Postives = 81/162 (50.00%), Query Frame = 1
Query:  394 PQKIFSLYELQSATNNFSFENLIGKGGYAEVYKGRLRNGQLVAIKRLTRGTADEIIADFLSELGIMAHVDHPNTAKLLGYGIEGG----------MHIVLELSPNGSLASLLYGMKEK--LKWGIRYKIALGVAEGLLYLHEGCQRRIIHRDIKAAHILLTE 843
            P ++FSL EL+ ATN+F   +L  +    ++Y+G LR G  V + R+ +     +      ++ +++ + H +   +LG+ I             + IV E   +GSL   L   ++K  LKW  R  IA+GVA G+ +LH G    I   ++K  +I+L E
Sbjct:  436 PYRVFSLEELEEATNDFDAASLFCE----QLYRGCLREGIPVTV-RVIKLKQKSLPQSLAQQMEVLSKLRHMHLVSVLGHSIASNQDHNQHAGHTIFIVQEYISSGSLRDFLTNCRKKEVLKWPQRMAIAIGVARGIQFLHMGVAPGIFGNNLKIENIMLDE 592          
BLAST of FC929045 vs. ExPASy Swiss-Prot
Match: PLK4_CULQU (Serine/threonine-protein kinase PLK4 OS=Culex quinquefasciatus GN=SAK PE=3 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 6.764e-11
Identity = 48/144 (33.33%), Postives = 77/144 (53.47%), Query Frame = 1
Query:  439 NFSFENLIGKGGYAEVYKGR-LRNGQLVAIKRLTR------GTADEIIADFLSELGIMAHVDHPNTAKLLGYGIEGG-MHIVLELSPNGSLASLLYGMKEKLKWGIRYKIALGVAEGLLYLHEGCQRRIIHRDIKAAHILLTED 846
            +F    L+GKGG+A VY+ +  R G LVAIK + +      G A+ +      E+ I + + HP+  +L  +  +   +++VLEL+ NG L   L   K+         +   V EGLLYLH     +I+HRD+  A++LLT++
Sbjct:   11 DFEVFELLGKGGFASVYRAKCCRTGILVAIKMIDKKLMQSSGMANRV----RQEVSIHSRLKHPSILELYTFFEDANFVYLVLELAENGELQRYLRDTKKTFNEYEAATVLKQVVEGLLYLH---SHQILHRDMSLANLLLTKE 147          
BLAST of FC929045 vs. ExPASy Swiss-Prot
Match: EPHB3_XENLA (Ephrin type-B receptor 3 OS=Xenopus laevis GN=ephb3 PE=2 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 6.764e-11
Identity = 50/166 (30.12%), Postives = 77/166 (46.39%), Query Frame = 1
Query:  364 LFVNSYDSQSPQKIFSLYELQSATNNFSFENLIGKGGYAEVYKGRL----RNGQLVAIKRLTRGTADEIIADFLSELGIMAHVDHPNTAKLLGYGIEG-GMHIVLELSPNGSLASLLYGMKEKLKWGIRYKIALGVAEGLLYLHEGCQRRIIHRDIKAAHILLTED 846
            L+++ +  + P +    +  +   +    E +IG G + EV +G+L    R  Q VAIK L  G  ++   DFL E  IM   DHPN  +L G       + I+ E   NG+L S L     +        I  G+A G+ YL E      +HRD+ A +IL+  +
Sbjct:  583 LYIDPFTYEDPNEAVRDFAKEIDISCVKIEEVIGAGEFGEVCRGKLKQAGRREQFVAIKTLKAGYTEQQRRDFLGEASIMGQFDHPNIIRLEGVVTRSRPVMILTEFMENGALDSFLRMNDGQFTVIQLVGILRGIASGMKYLSE---MNYVHRDLAARNILVNSN 745          
BLAST of FC929045 vs. ExPASy Swiss-Prot
Match: Y5659_ARATH (Probable inactive receptor kinase At5g16590 OS=Arabidopsis thaliana GN=At5g16590 PE=1 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 8.834e-11
Identity = 45/134 (33.58%), Postives = 67/134 (50.00%), Query Frame = 1
Query:  457 LIGKGGYAEVYKGRLRNGQLVAIKRLTRGTADEIIADFLSELGIMAHVDHPNTAKLLGYGIEGGMH-IVLELSPNGSLASLLYGMK----EKLKWGIRYKIALGVAEGLLYLHEGCQRRIIHRDIKAAHILLTE 843
            ++GKG +   YK    +G +VA+KRL      E   +F  +L ++  + H N   L+ Y        +V E    GSL++LL+G K      L W  R  IALG A  + YLH        H +IK+++ILL+E
Sbjct:  348 VLGKGTFGSSYKASFDHGLVVAVKRLRDVVVPE--KEFREKLQVLGSISHANLVTLIAYYFSRDEKLVVFEYMSRGSLSALLHGNKGSGRSPLNWETRANIALGAARAISYLHSR-DATTSHGNIKSSNILLSE 478          
The following BLAST results are available for this feature:
BLAST of FC929045 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 294
Match NameE-valueIdentityDescription
Y1848_ARATH3.036e-1133.97Probable inactive receptor kinase At1g48480 OS=Ara... [more]
PLK4_NEMVE3.036e-1135.71Serine/threonine-protein kinase PLK4 OS=Nematostel... [more]
TESK2_HUMAN3.965e-1131.82Dual specificity testis-specific protein kinase 2 ... [more]
SLK_HUMAN3.965e-1129.23STE20-like serine/threonine-protein kinase OS=Homo... [more]
7TMK1_DICDI3.965e-1134.25Seven transmembrane domain-containing tyrosine-pro... [more]
YR826_MIMIV5.179e-1133.59Putative serine/threonine-protein kinase/receptor ... [more]
Y2278_ARATH6.764e-1129.63Probable LRR receptor-like serine/threonine-protei... [more]
PLK4_CULQU6.764e-1133.33Serine/threonine-protein kinase PLK4 OS=Culex quin... [more]
EPHB3_XENLA6.764e-1130.12Ephrin type-B receptor 3 OS=Xenopus laevis GN=ephb... [more]
Y5659_ARATH8.834e-1133.58Probable inactive receptor kinase At5g16590 OS=Ara... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAH1DD03RM2 PhII-IIIV1 Citrus clementina cDNA clone KN0AAH1DD03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC929045 ID=FC929045; Name=FC929045; organism=Citrus clementina; type=EST; length=847bp
ATTTTAGTTTCTTTTTTGACTGAGATAAGAGGACGGGACAAAGAAACAGA
ATTTAGAATGCTCTGTTCTCATCCCCTGTTTCTGGTCCAGATTTTATAAT
ATCTGGACATGGAGAAGAAGGAAGATTCATGCTCGCCGGTTGGGGTTCTT
GAGGACTATTTTCGAAGCGAAGACTCCGAAACATGTTCTTCAAAAGAACC
ATGCTCTGAAACTAAGCCGGAATCCAAATCCAATTCTCGCTGGCATTTAT
TCTACGACTTATTCAGAAACAAATCGAAGAAATCATTAGTCACATTGTAT
CCCCTCAAGCTTTCAATAAGAAGAAGCAGTAGTATGAGAGAGGGCATTGA
TATGCCGAGGAATCTTTTTGTAAATTCCTACGATTCACAGTCTCCCCAGA
AGATTTTCTCCCTCTATGAGCTGCAATCCGCCACCAACAATTTCAGCTTC
GAAAATTTGATTGGAAAGGGAGGTTATGCTGAAGTTTACAAAGGGCGTTT
GAGAAATGGGCAGCTTGTGGCAATCAAACGGCTAACAAGAGGTACAGCAG
ATGAGATTATAGCGGACTTTTTATCGGAGCTTGGGATTATGGCTCATGTC
GATCATCCTAATACTGCTAAGTTATTAGGATATGGGATTGAAGGAGGCAT
GCACATTGTTCTTGAATTGTCTCCTAATGGAAGCTTAGCTTCTCTCCTTT
ATGGTATGAAGGAGAAACTGAAATGGGGTATCAGGTATAAGATTGCGTTA
GGGGTAGCCGAAGGCTTACTTTATCTTCATGAGGGCTGTCAGAGGAGAAT
CATTCATAGAGATATTAAAGCTGCCCATATTTTGCTCACTGAGGACT
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