FC929045

Overview
NameFC929045
Unique NameFC929045
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length847
Libraries
Library NameType
PhII-IIIV1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC929045 vs. ExPASy Swiss-Prot
Match: SERK4_ARATH (Somatic embryogenesis receptor kinase 4 OS=Arabidopsis thaliana GN=SERK4 PE=1 SV=2)

HSP 1 Score: 112.079 bits (279), Expect = 4.085e-24
Identity = 67/153 (43.79%), Postives = 93/153 (60.78%), Query Frame = 1
Query:  400 KIFSLYELQSATNNFSFENLIGKGGYAEVYKGRLRNGQLVAIKRLTRGTADEIIADFLSELGIMAHVDHPNTAKLLGYGIEGGMH-IVLELSPNGSLASLLYGMKE---KLKWGIRYKIALGVAEGLLYLHEGCQRRIIHRDIKAAHILLTED 846
            K F+L EL  AT+NFS +N++G+GG+ +VYKGRL +G LVA+KRL           F +E+ +++   H N  +L G+ +      +V     NGS+AS L    E    L W  R  IALG A GL YLH+ C ++IIHRD+KAA+ILL E+
Sbjct:  280 KRFTLRELLVATDNFSNKNVLGRGGFGKVYKGRLADGNLVAVKRLKEERTKGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPEGNPALDWPKRKHIALGSARGLAYLHDHCDQKIIHRDVKAANILLDEE 432          
BLAST of FC929045 vs. ExPASy Swiss-Prot
Match: CRK16_ARATH (Putative cysteine-rich receptor-like protein kinase 16 OS=Arabidopsis thaliana GN=CRK16 PE=2 SV=2)

HSP 1 Score: 112.079 bits (279), Expect = 4.085e-24
Identity = 64/152 (42.11%), Postives = 91/152 (59.87%), Query Frame = 1
Query:  406 FSLYELQSATNNFSFENLIGKGGYAEVYKGRLRNGQLVAIKRLTR--GTADEIIADFLSELGIMAHVDHPNTAKLLGYGIEGGMHI-VLELSPNGSLASLLYGMKEK--LKWGIRYKIALGVAEGLLYLHEGCQRRIIHRDIKAAHILLTED 846
            F    +++ATNNF   N +G GG+ EV+KG   NG  VA+KRL++  G  +E   +F +E+ ++A + H N  +LLG+ +EG   I V E  PN SL   L+  + +  L W  RY I  GV  G+LYLH+  +  IIHRD+KA +ILL  D
Sbjct:  323 FDFKAIEAATNNFQKSNKLGHGGFGEVFKGTFPNGTEVAVKRLSKISGQGEE---EFKNEVLLVAKLQHRNLVRLLGFSVEGEEKILVYEYMPNKSLDYFLFDHRRRGQLDWRTRYNIIRGVTRGILYLHQDSRLTIIHRDLKAGNILLDVD 471          
BLAST of FC929045 vs. ExPASy Swiss-Prot
Match: CRK10_ARATH (Cysteine-rich receptor-like protein kinase 10 OS=Arabidopsis thaliana GN=CRK10 PE=1 SV=2)

HSP 1 Score: 112.079 bits (279), Expect = 4.085e-24
Identity = 63/145 (43.45%), Postives = 94/145 (64.83%), Query Frame = 1
Query:  421 LQSATNNFSFENLIGKGGYAEVYKGRLRNGQLVAIKRLTRGTADEIIADFLSELGIMAHVDHPNTAKLLGYGIEGGMHI-VLELSPNGSLASLLY--GMKEKLKWGIRYKIALGVAEGLLYLHEGCQRRIIHRDIKAAHILLTED 846
            +Q+AT++F   N IG+GG+ EVYKG L +G  VA+KRL++ +    + +F +E+ ++A + H N  +LLG+ ++G   + V E  PN SL   L+    K +L W  RYKI  GVA G+LYLH+  +  IIHRD+KA++ILL  D
Sbjct:  330 IQTATDDFVESNKIGQGGFGEVYKGTLSDGTEVAVKRLSKSSGQGEV-EFKNEVVLVAKLQHRNLVRLLGFCLDGEERVLVYEYVPNKSLDYFLFDPAKKGQLDWTRRYKIIGGVARGILYLHQDSRLTIIHRDLKASNILLDAD 473          
BLAST of FC929045 vs. ExPASy Swiss-Prot
Match: SRK6_BRAOE (Putative serine/threonine-protein kinase receptor OS=Brassica oleracea var. acephala GN=SRK6 PE=2 SV=1)

HSP 1 Score: 111.309 bits (277), Expect = 6.967e-24
Identity = 70/205 (34.15%), Postives = 120/205 (58.54%), Query Frame = 1
Query:  247 LFYDLFRNKSKKSLVTLYPLKLSIRRSS-SMREGIDMPRNLFVNSYDSQSPQ-KIFSLYELQSATNNFSFENLIGKGGYAEVYKGRLRNGQLVAIKRLTRGTADEIIADFLSELGIMAHVDHPNTAKLLGYGIEGGMHIVL-ELSPNGSLASLLYGM--KEKLKWGIRYKIALGVAEGLLYLHEGCQRRIIHRDIKAAHILLTED 846
            + + L++ K K++  +   +  + R  +  M E +   +  F   Y  +  +  +  +  +  AT NFS  N +G+GG+  VYKGRL +G+ +A+KRL++ T+ +   +F++E+ ++A + H N  ++LG  IEG   +++ E   N SL S L+G   + KL W  R+ I  GVA GLLYLH+  + RIIHRD+K ++ILL ++
Sbjct:  461 IMFCLWKRKQKRAKASAISIANTQRNQNLPMNEMVLSSKREFSGEYKFEELELPLIEMETVVKATENFSSCNKLGQGGFGIVYKGRLLDGKEIAVKRLSK-TSVQGTDEFMNEVTLIARLQHINLVQVLGCCIEGDEKMLIYEYLENLSLDSYLFGKTRRSKLNWNERFDITNGVARGLLYLHQDSRFRIIHRDLKVSNILLDKN 664          
BLAST of FC929045 vs. ExPASy Swiss-Prot
Match: SERK1_ARATH (Somatic embryogenesis receptor kinase 1 OS=Arabidopsis thaliana GN=SERK1 PE=1 SV=2)

HSP 1 Score: 111.309 bits (277), Expect = 6.967e-24
Identity = 69/174 (39.66%), Postives = 101/174 (58.05%), Query Frame = 1
Query:  355 PRNLFVNSYDSQSPQ------KIFSLYELQSATNNFSFENLIGKGGYAEVYKGRLRNGQLVAIKRLTRGTADEIIADFLSELGIMAHVDHPNTAKLLGYGIEGGMH-IVLELSPNGSLASLLY---GMKEKLKWGIRYKIALGVAEGLLYLHEGCQRRIIHRDIKAAHILLTED 846
            P ++F +    + P+      K FSL ELQ A++ FS +N++G+GG+ +VYKGRL +G LVA+KRL           F +E+ +++   H N  +L G+ +      +V     NGS+AS L      +  L W  R +IALG A GL YLH+ C  +IIHRD+KAA+ILL E+
Sbjct:  267 PLDIFFDVPAEEDPEVHLGQLKRFSLRELQVASDGFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERTPGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPPSQPPLDWPTRKRIALGSARGLSYLHDHCDPKIIHRDVKAANILLDEE 440          
BLAST of FC929045 vs. ExPASy Swiss-Prot
Match: CRK5_ARATH (Cysteine-rich receptor-like protein kinase 5 OS=Arabidopsis thaliana GN=CRK5 PE=1 SV=1)

HSP 1 Score: 110.923 bits (276), Expect = 9.099e-24
Identity = 64/150 (42.67%), Postives = 94/150 (62.67%), Query Frame = 1
Query:  406 FSLYELQSATNNFSFENLIGKGGYAEVYKGRLRNGQLVAIKRLTRGTADEIIADFLSELGIMAHVDHPNTAKLLGYGIEGGMHI-VLELSPNGSLASLLYG--MKEKLKWGIRYKIALGVAEGLLYLHEGCQRRIIHRDIKAAHILLTED 846
            F    +++AT+ FS  N +G+GG+ +VYKG L NG  VA+KRL++ T+ +   +F +E+ ++A + H N  KLLG+ +E    I V E   N SL   L+   M+ +L W  RYKI  G+A G+LYLH+  +  IIHRD+KA +ILL  D
Sbjct:  328 FDFKVIEAATDKFSMCNKLGQGGFGQVYKGTLPNGVQVAVKRLSK-TSGQGEKEFKNEVVVVAKLQHRNLVKLLGFCLEREEKILVYEFVSNKSLDYFLFDSRMQSQLDWTTRYKIIGGIARGILYLHQDSRLTIIHRDLKAGNILLDAD 476          
BLAST of FC929045 vs. ExPASy Swiss-Prot
Match: Y2296_ARATH (Probable receptor-like protein kinase At2g42960 OS=Arabidopsis thaliana GN=At2g42960 PE=2 SV=1)

HSP 1 Score: 110.538 bits (275), Expect = 1.188e-23
Identity = 64/154 (41.56%), Postives = 97/154 (62.99%), Query Frame = 1
Query:  406 FSLYELQSATNNFSFENLIGKGGYAEVYKGRLRNGQLVAIKRLTR--GTADEIIADFLSELGIMAHVDHPNTAKLLGYGIEGGMH--IVLELSPNGSLASLLYGMKEK---LKWGIRYKIALGVAEGLLYLHEGCQRRIIHRDIKAAHILLTED 846
            F+L +L+ ATN F+  N++G+GGY  VY+G+L NG  VA+K+L    G A++   +F  E+  + HV H N  +LLGY IE G+H  +V E   +G+L   L+G   +   L W  R KI  G A+ L YLHE  + +++HRDIKA++IL+ ++
Sbjct:  171 FTLRDLELATNRFAPVNVLGEGGYGVVYRGKLVNGTEVAVKKLLNNLGQAEK---EFRVEVEAIGHVRHKNLVRLLGYCIE-GVHRMLVYEYVNSGNLEQWLHGAMRQHGNLTWEARMKIITGTAQALAYLHEAIEPKVVHRDIKASNILIDDE 320          
BLAST of FC929045 vs. ExPASy Swiss-Prot
Match: Y2239_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At2g23950 OS=Arabidopsis thaliana GN=At2g23950 PE=2 SV=1)

HSP 1 Score: 110.538 bits (275), Expect = 1.188e-23
Identity = 62/147 (42.18%), Postives = 87/147 (59.18%), Query Frame = 1
Query:  406 FSLYELQSATNNFSFENLIGKGGYAEVYKGRLRNGQLVAIKRLTRGTADEIIADFLSELGIMAHVDHPNTAKLLGYGIEGGMHI-VLELSPNGSLASLLYGMKEKLKWGIRYKIALGVAEGLLYLHEGCQRRIIHRDIKAAHILLTE 843
            F+  EL  AT+ FS ++++G GG+  VY+G+  +G +VA+KRL         + F +EL +++   H N  +L+GY       + V     NGS+AS L   K  L W  R KIA+G A GL YLHE C  +IIHRD+KAA+ILL E
Sbjct:  287 FTFRELHVATDGFSSKSILGAGGFGNVYRGKFGDGTVVAVKRLKDVNGTSGNSQFRTELEMISLAVHRNLLRLIGYCASSSERLLVYPYMSNGSVASRLKA-KPALDWNTRKKIAIGAARGLFYLHEQCDPKIIHRDVKAANILLDE 432          
BLAST of FC929045 vs. ExPASy Swiss-Prot
Match: CRK42_ARATH (Cysteine-rich receptor-like protein kinase 42 OS=Arabidopsis thaliana GN=CRK42 PE=2 SV=1)

HSP 1 Score: 110.538 bits (275), Expect = 1.188e-23
Identity = 67/165 (40.61%), Postives = 94/165 (56.97%), Query Frame = 1
Query:  358 RNLFVNSYDSQSPQKIFSLYELQSATNNFSFENLIGKGGYAEVYKGRLRNGQLVAIKRLTRGTADEIIADFLSELGIMAHVDHPNTAKLLGYGIEGGMHI-VLELSPNGSLASLLYGMKEK--LKWGIRYKIALGVAEGLLYLHEGCQRRIIHRDIKAAHILLTE 843
            RNL + S    + +  F    L+ AT+ FS + ++G+GG   V+ G L NG+ VA+KRL   T D +  +F +E+ +++ + H N  KLLG  IEG   + V E  PN SL   L+   +   L W  R  I LG AEGL YLH G   RIIHRDIK +++LL +
Sbjct:  287 RNLGLVSRKFNNSKTKFKYETLEKATDYFSHKKMLGQGGNGTVFLGILPNGKNVAVKRLVFNTRDWV-EEFFNEVNLISGIQHKNLVKLLGCSIEGPESLLVYEYVPNKSLDQFLFDESQSKVLNWSQRLNIILGTAEGLAYLHGGSPVRIIHRDIKTSNVLLDD 450          
BLAST of FC929045 vs. ExPASy Swiss-Prot
Match: CRK33_ARATH (Putative cysteine-rich receptor-like protein kinase 33 OS=Arabidopsis thaliana GN=CRK33 PE=2 SV=1)

HSP 1 Score: 110.153 bits (274), Expect = 1.552e-23
Identity = 61/147 (41.50%), Postives = 94/147 (63.95%), Query Frame = 1
Query:  406 FSLYELQSATNNFSFENLIGKGGYAEVYKGRLRNGQLVAIKRLTRGTADEIIADFLSELGIMAHVDHPNTAKLLGYGIEGGMHI-VLELSPNGSLASLLYGMKEK--LKWGIRYKIALGVAEGLLYLHEGCQRRIIHRDIKAAHILL 837
            + L  +++AT  FS  N++G+GG+ EV+KG L++G  +A+KRL++ +A  +  +F +E  ++A + H N   +LG+ +EG   I V E  PN SL   L+   +K  L W  RYKI +G A G+LYLH     +IIHRD+KA++ILL
Sbjct:  309 YDLKTIEAATCTFSKCNMLGQGGFGEVFKGVLQDGSEIAVKRLSKESAQGV-QEFQNETSLVAKLQHRNLVGVLGFCMEGEEKILVYEFVPNKSLDQFLFEPTKKGQLDWAKRYKIIVGTARGILYLHHDSPLKIIHRDLKASNILL 454          
The following BLAST results are available for this feature:
BLAST of FC929045 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 294
Match NameE-valueIdentityDescription
SERK4_ARATH4.085e-2443.79Somatic embryogenesis receptor kinase 4 OS=Arabido... [more]
CRK16_ARATH4.085e-2442.11Putative cysteine-rich receptor-like protein kinas... [more]
CRK10_ARATH4.085e-2443.45Cysteine-rich receptor-like protein kinase 10 OS=A... [more]
SRK6_BRAOE6.967e-2434.15Putative serine/threonine-protein kinase receptor ... [more]
SERK1_ARATH6.967e-2439.66Somatic embryogenesis receptor kinase 1 OS=Arabido... [more]
CRK5_ARATH9.099e-2442.67Cysteine-rich receptor-like protein kinase 5 OS=Ar... [more]
Y2296_ARATH1.188e-2341.56Probable receptor-like protein kinase At2g42960 OS... [more]
Y2239_ARATH1.188e-2342.18Probable LRR receptor-like serine/threonine-protei... [more]
CRK42_ARATH1.188e-2340.61Cysteine-rich receptor-like protein kinase 42 OS=A... [more]
CRK33_ARATH1.552e-2341.50Putative cysteine-rich receptor-like protein kinas... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAH1DD03RM2 PhII-IIIV1 Citrus clementina cDNA clone KN0AAH1DD03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC929045 ID=FC929045; Name=FC929045; organism=Citrus clementina; type=EST; length=847bp
ATTTTAGTTTCTTTTTTGACTGAGATAAGAGGACGGGACAAAGAAACAGA
ATTTAGAATGCTCTGTTCTCATCCCCTGTTTCTGGTCCAGATTTTATAAT
ATCTGGACATGGAGAAGAAGGAAGATTCATGCTCGCCGGTTGGGGTTCTT
GAGGACTATTTTCGAAGCGAAGACTCCGAAACATGTTCTTCAAAAGAACC
ATGCTCTGAAACTAAGCCGGAATCCAAATCCAATTCTCGCTGGCATTTAT
TCTACGACTTATTCAGAAACAAATCGAAGAAATCATTAGTCACATTGTAT
CCCCTCAAGCTTTCAATAAGAAGAAGCAGTAGTATGAGAGAGGGCATTGA
TATGCCGAGGAATCTTTTTGTAAATTCCTACGATTCACAGTCTCCCCAGA
AGATTTTCTCCCTCTATGAGCTGCAATCCGCCACCAACAATTTCAGCTTC
GAAAATTTGATTGGAAAGGGAGGTTATGCTGAAGTTTACAAAGGGCGTTT
GAGAAATGGGCAGCTTGTGGCAATCAAACGGCTAACAAGAGGTACAGCAG
ATGAGATTATAGCGGACTTTTTATCGGAGCTTGGGATTATGGCTCATGTC
GATCATCCTAATACTGCTAAGTTATTAGGATATGGGATTGAAGGAGGCAT
GCACATTGTTCTTGAATTGTCTCCTAATGGAAGCTTAGCTTCTCTCCTTT
ATGGTATGAAGGAGAAACTGAAATGGGGTATCAGGTATAAGATTGCGTTA
GGGGTAGCCGAAGGCTTACTTTATCTTCATGAGGGCTGTCAGAGGAGAAT
CATTCATAGAGATATTAAAGCTGCCCATATTTTGCTCACTGAGGACT
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