FC929045

Overview
NameFC929045
Unique NameFC929045
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length847
Libraries
Library NameType
PhII-IIIV1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC929045 vs. ExPASy Swiss-Prot
Match: CRK24_ARATH (Cysteine-rich receptor-like protein kinase 24 OS=Arabidopsis thaliana GN=CRK24 PE=2 SV=2)

HSP 1 Score: 110.153 bits (274), Expect = 1.552e-23
Identity = 63/150 (42.00%), Postives = 90/150 (60.00%), Query Frame = 1
Query:  406 FSLYELQSATNNFSFENLIGKGGYAEVYKGRLRNGQLVAIKRLTRGTADEIIADFLSELGIMAHVDHPNTAKLLGYGIEGGMHI-VLELSPNGSLASLLYG--MKEKLKWGIRYKIALGVAEGLLYLHEGCQRRIIHRDIKAAHILLTED 846
            F    +++AT NF   N +G GG+ EVYKG   NG  VA+KRL++ T+ +   +F +E+ ++A + H N  KLLGY ++G   I V E  PN SL   L+    K +L W  RY I  G+  G++YLH+  +  IIHRD+KA +ILL  D
Sbjct:  300 FEFKAIEAATCNFHNVNKLGHGGFGEVYKGTFPNGTEVAVKRLSK-TSGQGEEEFKNEVFLVAKLQHRNLVKLLGYAVKGDEKILVYEFLPNKSLDHFLFDPVKKGQLDWTRRYNIINGITRGIVYLHQDSRLTIIHRDLKAGNILLDAD 448          
BLAST of FC929045 vs. ExPASy Swiss-Prot
Match: TMK1_ARATH (Probable receptor protein kinase TMK1 OS=Arabidopsis thaliana GN=TMK1 PE=1 SV=1)

HSP 1 Score: 109.383 bits (272), Expect = 2.648e-23
Identity = 61/154 (39.61%), Postives = 92/154 (59.74%), Query Frame = 1
Query:  403 IFSLYELQSATNNFSFENLIGKGGYAEVYKGRLRNGQLVAIKRLTRGT-ADEIIADFLSELGIMAHVDHPNTAKLLGYGIEGGMH-IVLELSPNGSLASLLYGMKEK----LKWGIRYKIALGVAEGLLYLHEGCQRRIIHRDIKAAHILLTED 846
            + S+  L+S TNNFS +N++G GG+  VYKG L +G  +A+KR+  G  A +  A+F SE+ ++  V H +   LLGY ++G    +V E  P G+L+  L+   E+    L W  R  +AL VA G+ YLH    +  IHRD+K ++ILL +D
Sbjct:  575 LISIQVLRSVTNNFSSDNILGSGGFGVVYKGELHDGTKIAVKRMENGVIAGKGFAEFKSEIAVLTKVRHRHLVTLLGYCLDGNEKLLVYEYMPQGTLSRHLFEWSEEGLKPLLWKQRLTLALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDD 728          
BLAST of FC929045 vs. ExPASy Swiss-Prot
Match: CRK41_ARATH (Cysteine-rich receptor-like protein kinase 41 OS=Arabidopsis thaliana GN=CRK41 PE=2 SV=2)

HSP 1 Score: 109.383 bits (272), Expect = 2.648e-23
Identity = 72/191 (37.70%), Postives = 111/191 (58.12%), Query Frame = 1
Query:  289 VTLYPLKLSIRRSSSMR-EGIDMPRNLFVNSYDSQSPQKIFSLYELQSATNNFSFENLIGKGGYAEVYKGRLRNGQLVAIKRLTR--GTADEIIADFLSELGIMAHVDHPNTAKLLGYGIEGGMHIVL-ELSPNGSLASLLYGMKEK--LKWGIRYKIALGVAEGLLYLHEGCQRRIIHRDIKAAHILLTE 843
            V LY      RR++  R EG D+   +     D+Q  Q  F    L  ATN+FS +N +G+GG+  VYKG L  G+ +A+KRL+   G  D    +F++E+ ++A + H N  +LLG+ ++G   I++ E   N SL   ++    +  L W  RY+I  GVA GLLYLHE  + +I+HRD+KA+++LL +
Sbjct:  297 VFLYFFMTRNRRTAKQRHEGKDLEELMIK---DAQLLQLDFDTIRL--ATNDFSRDNQLGEGGFGAVYKGVLDYGEEIAVKRLSMKSGQGDN---EFINEVSLVAKLQHRNLVRLLGFCLQGEERILIYEFFKNTSLDHYIFDSNRRMILDWETRYRIISGVARGLLYLHEDSRFKIVHRDMKASNVLLDD 479          
BLAST of FC929045 vs. ExPASy Swiss-Prot
Match: CRK4_ARATH (Cysteine-rich receptor-like protein kinase 4 OS=Arabidopsis thaliana GN=CRK4 PE=2 SV=1)

HSP 1 Score: 108.997 bits (271), Expect = 3.458e-23
Identity = 62/150 (41.33%), Postives = 93/150 (62.00%), Query Frame = 1
Query:  406 FSLYELQSATNNFSFENLIGKGGYAEVYKGRLRNGQLVAIKRLTRGTADEIIADFLSELGIMAHVDHPNTAKLLGYGIEGGMHI-VLELSPNGSLASLLYG--MKEKLKWGIRYKIALGVAEGLLYLHEGCQRRIIHRDIKAAHILLTED 846
            F    +++ATN F   N +G+GG+ EVYKG   +G  VA+KRL++ T+ +   +F +E+ ++A + H N  +LLG+ +E    I V E  PN SL   ++   M+  L W  RYKI  G+A G+LYLH+  +  IIHRD+KA +ILL +D
Sbjct:  339 FDFKAIEAATNKFCETNKLGQGGFGEVYKGIFPSGVQVAVKRLSK-TSGQGEREFANEVIVVAKLQHRNLVRLLGFCLERDERILVYEFVPNKSLDYFIFDSTMQSLLDWTRRYKIIGGIARGILYLHQDSRLTIIHRDLKAGNILLGDD 487          
BLAST of FC929045 vs. ExPASy Swiss-Prot
Match: CRK27_ARATH (Cysteine-rich receptor-like protein kinase 27 OS=Arabidopsis thaliana GN=CRK27 PE=2 SV=2)

HSP 1 Score: 108.612 bits (270), Expect = 4.516e-23
Identity = 62/149 (41.61%), Postives = 92/149 (61.74%), Query Frame = 1
Query:  406 FSLYELQSATNNFSFENLIGKGGYAEVYKGRLRNGQLVAIKRLTRGTADEIIADFLSELGIMAHVDHPNTAKLLGYGI-EGGMHIVLELSPNGSLASLLYG--MKEKLKWGIRYKIALGVAEGLLYLHEGCQRRIIHRDIKAAHILLTE 843
            F    ++ AT++FS  N IG+GG+  VYKG L +G  +A+KRL+  +     A+F +E+ +M  + H N  KL G+ I E    +V E  PN SL   L+    +++L W  RY I +GV+ GLLYLHEG +  IIHRD+K++++LL E
Sbjct:  321 FDFETIRVATDDFSLTNKIGEGGFGVVYKGHLPDGLEIAVKRLSIHSGQGN-AEFKTEVLLMTKLQHKNLVKLFGFSIKESERLLVYEFIPNTSLDRFLFDPIKQKQLDWEKRYNIIVGVSRGLLYLHEGSEFPIIHRDLKSSNVLLDE 468          
BLAST of FC929045 vs. ExPASy Swiss-Prot
Match: Y1684_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g06840 OS=Arabidopsis thaliana GN=At1g06840 PE=1 SV=2)

HSP 1 Score: 108.227 bits (269), Expect = 5.898e-23
Identity = 64/148 (43.24%), Postives = 93/148 (62.84%), Query Frame = 1
Query:  400 KIFSLYELQSATNNFSFENLIGKGGYAEVYKGRLRNGQLVAIKRLTRGTADEIIADFLSELGIMAHVDHPNTAKLLGY-GIEGGMHIVLELSPNGSLA-SLLYGMKEKLKWGIRYKIALGVAEGLLYLHEGCQRRIIHRDIKAAHILL 837
            K F+  EL  AT+NF+    IG+GGY +VYKG L +G +VAIKR   G+  +   +FL+E+ +++ + H N   LLG+   EG   +V E   NG+L  ++   +KE L + +R +IALG A+G+LYLH      I HRDIKA++ILL
Sbjct:  611 KSFTYAELALATDNFNSSTQIGQGGYGKVYKGTLGSGTVVAIKRAQEGSL-QGEKEFLTEIELLSRLHHRNLVSLLGFCDEEGEQMLVYEYMENGTLRDNISVKLKEPLDFAMRLRIALGSAKGILYLHTEANPPIFHRDIKASNILL 757          
BLAST of FC929045 vs. ExPASy Swiss-Prot
Match: Y5374_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At5g37450 OS=Arabidopsis thaliana GN=At5g37450 PE=2 SV=1)

HSP 1 Score: 107.842 bits (268), Expect = 7.703e-23
Identity = 70/187 (37.43%), Postives = 107/187 (57.22%), Query Frame = 1
Query:  283 SLVTLYPLKLSIRRSSSMREGIDMPRNLFVNSYDSQSPQKIFSLYELQSATNNFSFENLIGKGGYAEVYKGRLRNGQLVAIKRLTRGTADEIIADFLSELGIMAHVDHPNTAKLLGY-GIEGGMHIVLELSPNGSLASLLYG-MKEKLKWGIRYKIALGVAEGLLYLHEGCQRRIIHRDIKAAHILL 837
            SL  ++ +K S R+  +    ++    L     + +S  K ++  EL SAT++FS  + IG+GGY +VYKG L  G +VA+KR  +G+  +   +F +E+ +++ + H N   LLGY   +G   +V E  PNGSL   L    ++ L   +R +IALG A G+LYLH      IIHRDIK ++ILL
Sbjct:  579 SLALVFFIKRSKRKRKTREVDMEQEHPLPKPPMNMESV-KGYNFTELDSATSSFSDLSQIGRGGYGKVYKGHLPGGLVVAVKRAEQGSL-QGQKEFFTEIELLSRLHHRNLVSLLGYCDQKGEQMLVYEYMPNGSLQDALSARFRQPLSLALRLRIALGSARGILYLHTEADPPIIHRDIKPSNILL 763          
BLAST of FC929045 vs. ExPASy Swiss-Prot
Match: WAKLB_ARATH (Wall-associated receptor kinase-like 2 OS=Arabidopsis thaliana GN=WAKL2 PE=2 SV=1)

HSP 1 Score: 107.842 bits (268), Expect = 7.703e-23
Identity = 58/151 (38.41%), Postives = 93/151 (61.59%), Query Frame = 1
Query:  400 KIFSLYELQSATNNFSFENLIGKGGYAEVYKGRLRNGQLVAIKRLTRGTADEIIADFLSELGIMAHVDHPNTAKLLGYGIEGGMHI-VLELSPNGSLASLLYGMKE--KLKWGIRYKIALGVAEGLLYLHEGCQRRIIHRDIKAAHILLTE 843
            +IFS +EL+ AT+NF+   ++G+GG   VYKG L +G++VA+KR ++   ++ + +F++E+ ++A ++H N  KLLG  +E  + + V E  PNG L   L+   +   + W +R  IA+ +A  L YLH      I HRDIK  +ILL E
Sbjct:  402 RIFSSHELEKATDNFNKNRVLGQGGQGTVYKGMLVDGRIVAVKR-SKAVDEDRVEEFINEVVVLAQINHRNIVKLLGCCLETEVPVLVYEFVPNGDLCKRLHDESDDYTMTWEVRLHIAIEIAGALSYLHSAASFPIYHRDIKTTNILLDE 551          
BLAST of FC929045 vs. ExPASy Swiss-Prot
Match: PSKR1_ARATH (Phytosulfokine receptor 1 OS=Arabidopsis thaliana GN=PSKR1 PE=2 SV=4)

HSP 1 Score: 107.842 bits (268), Expect = 7.703e-23
Identity = 64/157 (40.76%), Postives = 92/157 (58.60%), Query Frame = 1
Query:  388 QSPQKIFSLYELQSATNNFSFENLIGKGGYAEVYKGRLRNGQLVAIKRLTRGTADEIIADFLSELGIMAHVDHPNTAKLLGYGI-EGGMHIVLELSPNGSLASLLYGMKEK---LKWGIRYKIALGVAEGLLYLHEGCQRRIIHRDIKAAHILLTED 846
            QS  K  S  +L  +TN+F   N+IG GG+  VYK  L +G+ VAIK+L+ G   +I  +F +E+  ++   HPN   L G+   +    ++     NGSL   L+   +    LKW  R +IA G A+GLLYLHEGC   I+HRDIK+++ILL E+
Sbjct:  716 QSNDKELSYDDLLDSTNSFDQANIIGCGGFGMVYKATLPDGKKVAIKKLS-GDCGQIEREFEAEVETLSRAQHPNLVLLRGFCFYKNDRLLIYSYMENGSLDYWLHERNDGPALLKWKTRLRIAQGAAKGLLYLHEGCDPHILHRDIKSSNILLDEN 871          
BLAST of FC929045 vs. ExPASy Swiss-Prot
Match: CRK20_ARATH (Putative cysteine-rich receptor-like protein kinase 20 OS=Arabidopsis thaliana GN=CRK20 PE=2 SV=2)

HSP 1 Score: 107.842 bits (268), Expect = 7.703e-23
Identity = 64/150 (42.67%), Postives = 91/150 (60.67%), Query Frame = 1
Query:  406 FSLYELQSATNNFSFENLIGKGGYAEVYKGRLRNGQLVAIKRLTRGTADEIIADFLSELGIMAHVDHPNTAKLLGYGIEGGMHI-VLELSPNGSLASLLYG--MKEKLKWGIRYKIALGVAEGLLYLHEGCQRRIIHRDIKAAHILLTED 846
            F    + +AT+ F   N +G+GG+ EVYKG   +G  VA+KRL++ +      +F +E+ ++A + H N  KLLGY +EG   I V E  PN SL   L+   M+ +L W  RYKI  G+A G+LYLH+  +  IIHRD+KA +ILL  D
Sbjct:  332 FDFKAIVAATDIFLPINKLGQGGFGEVYKGTFPSGVQVAVKRLSKNSGQGE-KEFENEVVVVAKLQHRNLVKLLGYCLEGEEKILVYEFVPNKSLDYFLFDPTMQGQLDWSRRYKIIGGIARGILYLHQDSRLTIIHRDLKAGNILLDAD 480          
The following BLAST results are available for this feature:
BLAST of FC929045 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 294
Match NameE-valueIdentityDescription
CRK24_ARATH1.552e-2342.00Cysteine-rich receptor-like protein kinase 24 OS=A... [more]
TMK1_ARATH2.648e-2339.61Probable receptor protein kinase TMK1 OS=Arabidops... [more]
CRK41_ARATH2.648e-2337.70Cysteine-rich receptor-like protein kinase 41 OS=A... [more]
CRK4_ARATH3.458e-2341.33Cysteine-rich receptor-like protein kinase 4 OS=Ar... [more]
CRK27_ARATH4.516e-2341.61Cysteine-rich receptor-like protein kinase 27 OS=A... [more]
Y1684_ARATH5.898e-2343.24Probable LRR receptor-like serine/threonine-protei... [more]
Y5374_ARATH7.703e-2337.43Probable LRR receptor-like serine/threonine-protei... [more]
WAKLB_ARATH7.703e-2338.41Wall-associated receptor kinase-like 2 OS=Arabidop... [more]
PSKR1_ARATH7.703e-2340.76Phytosulfokine receptor 1 OS=Arabidopsis thaliana ... [more]
CRK20_ARATH7.703e-2342.67Putative cysteine-rich receptor-like protein kinas... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAH1DD03RM2 PhII-IIIV1 Citrus clementina cDNA clone KN0AAH1DD03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC929045 ID=FC929045; Name=FC929045; organism=Citrus clementina; type=EST; length=847bp
ATTTTAGTTTCTTTTTTGACTGAGATAAGAGGACGGGACAAAGAAACAGA
ATTTAGAATGCTCTGTTCTCATCCCCTGTTTCTGGTCCAGATTTTATAAT
ATCTGGACATGGAGAAGAAGGAAGATTCATGCTCGCCGGTTGGGGTTCTT
GAGGACTATTTTCGAAGCGAAGACTCCGAAACATGTTCTTCAAAAGAACC
ATGCTCTGAAACTAAGCCGGAATCCAAATCCAATTCTCGCTGGCATTTAT
TCTACGACTTATTCAGAAACAAATCGAAGAAATCATTAGTCACATTGTAT
CCCCTCAAGCTTTCAATAAGAAGAAGCAGTAGTATGAGAGAGGGCATTGA
TATGCCGAGGAATCTTTTTGTAAATTCCTACGATTCACAGTCTCCCCAGA
AGATTTTCTCCCTCTATGAGCTGCAATCCGCCACCAACAATTTCAGCTTC
GAAAATTTGATTGGAAAGGGAGGTTATGCTGAAGTTTACAAAGGGCGTTT
GAGAAATGGGCAGCTTGTGGCAATCAAACGGCTAACAAGAGGTACAGCAG
ATGAGATTATAGCGGACTTTTTATCGGAGCTTGGGATTATGGCTCATGTC
GATCATCCTAATACTGCTAAGTTATTAGGATATGGGATTGAAGGAGGCAT
GCACATTGTTCTTGAATTGTCTCCTAATGGAAGCTTAGCTTCTCTCCTTT
ATGGTATGAAGGAGAAACTGAAATGGGGTATCAGGTATAAGATTGCGTTA
GGGGTAGCCGAAGGCTTACTTTATCTTCATGAGGGCTGTCAGAGGAGAAT
CATTCATAGAGATATTAAAGCTGCCCATATTTTGCTCACTGAGGACT
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