FC929050

Overview
NameFC929050
Unique NameFC929050
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length730
Libraries
Library NameType
PhII-IIIV1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig952 contig Ccv1_Contig952:43..772. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC929050 vs. ExPASy Swiss-Prot
Match: INO1_HUMAN (Inositol-3-phosphate synthase 1 OS=Homo sapiens GN=ISYNA1 PE=1 SV=1)

HSP 1 Score: 162.925 bits (411), Expect = 1.581e-39
Identity = 82/162 (50.62%), Postives = 111/162 (68.52%), Query Frame = 2
Query:  248 FKVESPNVKYTDNEIHSVYDYETTELVHENRNGTYQWIVKPKTVKYEFKTDVHVPKLGVMLVGWGGNNGSTLTGGVIANREGISWATKDTVQQANYFGSLTQASAIRVG-SYNGEEIYAPFKSILPMVNPDDIVFGGWDISDMNLADAMARARVFDIDLXKQ 730
            F VESP+V Y    I + Y+Y TT +  E   G  +  V P + ++ F+T   VP+LGVMLVGWGGNNGSTLT  V+ANR  +SW T+   ++ANY+GSLTQA  + +G    G+E++ PF ++LPMV P+D+VF GWDIS +NLA+AM RA+V D  L +Q
Sbjct:    7 FFVESPDVVYGPEAIEAQYEYRTTRVSREG--GVLK--VHPTSTRFTFRTARQVPRLGVMLVGWGGNNGSTLTAAVLANRLRLSWPTRSGRKEANYYGSLTQAGTVSLGLDAEGQEVFVPFSAVLPMVAPNDLVFDGWDISSLNLAEAMRRAKVLDWGLQEQ 164          
BLAST of FC929050 vs. ExPASy Swiss-Prot
Match: INO1_MACFA (Inositol-3-phosphate synthase 1 OS=Macaca fascicularis GN=ISYNA1 PE=2 SV=1)

HSP 1 Score: 162.54 bits (410), Expect = 2.065e-39
Identity = 82/162 (50.62%), Postives = 111/162 (68.52%), Query Frame = 2
Query:  248 FKVESPNVKYTDNEIHSVYDYETTELVHENRNGTYQWIVKPKTVKYEFKTDVHVPKLGVMLVGWGGNNGSTLTGGVIANREGISWATKDTVQQANYFGSLTQASAIRVG-SYNGEEIYAPFKSILPMVNPDDIVFGGWDISDMNLADAMARARVFDIDLXKQ 730
            F VESP+V Y    I + Y+Y TT +  E   G  +  V P + ++ F+T   VP+LGVMLVGWGGNNGSTLT  V+ANR  +SW T+   ++ANY+GSLTQA  + +G    G+E++ PF ++LPMV P+D+VF GWDIS +NLA+AM RA+V D  L +Q
Sbjct:    7 FFVESPDVVYGPEAIEAQYEYRTTRVSREG--GVLK--VHPTSTRFTFRTARQVPRLGVMLVGWGGNNGSTLTAAVLANRLRLSWPTRSGRKEANYYGSLTQAGTVSLGLDAEGQEVFVPFSALLPMVAPNDLVFDGWDISSLNLAEAMRRAKVLDWGLQEQ 164          
BLAST of FC929050 vs. ExPASy Swiss-Prot
Match: INO1_DROME (Inositol-3-phosphate synthase OS=Drosophila melanogaster GN=Inos PE=1 SV=1)

HSP 1 Score: 158.303 bits (399), Expect = 3.895e-38
Identity = 80/161 (49.69%), Postives = 106/161 (65.84%), Query Frame = 2
Query:  251 KVESPNVKYTDNEIHSVYDYETTELVHENRNGTYQWIVKPKTVKYEFKTDVHVPKLGVMLVGWGGNNGSTLTGGVIANREGISWATKDTVQQANYFGSLTQASAIRVGS-YNGEEIYAPFKSILPMVNPDDIVFGGWDISDMNLADAMARARVFDIDLXKQ 730
            +V SP V+  D  I + YDY+T+   H  R    Q  V P+T   + +T  HVPKLGVMLVGWGGNNGSTLT  + ANR  + W  +  VQ+AN++GS+TQAS + +GS  +G ++Y P K +LPMV PD+I+  GWDIS ++L DAM RA V D+ L  Q
Sbjct:   10 EVISPKVQVDDEFITTDYDYQTS---HVKRTADGQLQVHPQTTSLKIRTGRHVPKLGVMLVGWGGNNGSTLTAALEANRRQLKWRKRTGVQEANWYGSITQASTVFIGSDEDGGDVYVPMKELLPMVEPDNIIVDGWDISGLHLGDAMRRAEVLDVALQDQ 167          
BLAST of FC929050 vs. ExPASy Swiss-Prot
Match: INO1_RAT (Inositol-3-phosphate synthase 1 OS=Rattus norvegicus GN=Isyna1 PE=2 SV=2)

HSP 1 Score: 157.147 bits (396), Expect = 8.677e-38
Identity = 78/160 (48.75%), Postives = 110/160 (68.75%), Query Frame = 2
Query:  254 VESPNVKYTDNEIHSVYDYETTELVHENRNGTYQWIVKPKTVKYEFKTDVHVPKLGVMLVGWGGNNGSTLTGGVIANREGISWATKDTVQQANYFGSLTQASAIRVG-SYNGEEIYAPFKSILPMVNPDDIVFGGWDISDMNLADAMARARVFDIDLXKQ 730
            V+SP+V +    I + Y+Y TT +  E   G  +  V+P   ++ F+T   VP+LGVMLVGWGGNNGSTLT  V+ANR  ++W T+   ++ANY+GSLTQA  + +G   +G E++ PF ++LPMV P+D+VF GWDIS +NLA+AM RA+V D  L +Q
Sbjct:    9 VDSPDVIFGPEAIEARYEYRTTRVSREG--GVLR--VRPTATRFTFRTARQVPRLGVMLVGWGGNNGSTLTAAVLANRLRLTWPTRTGRKEANYYGSLTQAGTVNLGLDGDGREVFVPFSALLPMVAPNDLVFDGWDISSLNLAEAMRRAQVLDCGLQEQ 164          
BLAST of FC929050 vs. ExPASy Swiss-Prot
Match: INO1_CANAL (Inositol-3-phosphate synthase OS=Candida albicans GN=INO1 PE=1 SV=1)

HSP 1 Score: 150.214 bits (378), Expect = 1.061e-35
Identity = 75/160 (46.88%), Postives = 109/160 (68.12%), Query Frame = 2
Query:  257 ESPNVKYTDNEIHSVYDYETTELVHENRNGTYQWIVKPKTVKYEFKTDVHVPKLGVMLVGWGGNNGSTLTGGVIANREGISWATKDTVQQANYFGSLTQASAIRVG--SYNGEEIYAPFKSILPMVNPDDIVFGGWDISDMNLADAMARARVFDIDLXKQ 730
            +S N    D+ +++ + YE + +V ++ NG +  IV P    YEFK D+ VPK+G++LVG GGNNG+TL G  +AN+  IS+  K+ V + NY+GS+TQAS +++G     GE++Y PF SI+PMVNP+D+V  GWDIS + L  AM RA+V D+ L KQ
Sbjct:    8 KSSNSVTKDDHLYTKFTYENS-VVEKDANGKF--IVTPTASDYEFKVDLKVPKVGLLLVGIGGNNGTTLLGATLANKHNISFENKEGVVKPNYYGSVTQASTVKIGVDKETGEDVYVPFNSIVPMVNPNDLVVDGWDISGLPLDQAMKRAKVLDVTLQKQ 164          
BLAST of FC929050 vs. ExPASy Swiss-Prot
Match: INO1_YEAST (Inositol-3-phosphate synthase OS=Saccharomyces cerevisiae GN=INO1 PE=1 SV=3)

HSP 1 Score: 142.124 bits (357), Expect = 2.888e-33
Identity = 73/166 (43.98%), Postives = 108/166 (65.06%), Query Frame = 2
Query:  239 IENFKVESPNVKYTDNEIHSVYDYETTELVHENRNGTYQWIVKPKTVKYEFKTDVHVP-KLGVMLVGWGGNNGSTLTGGVIANREGISWATKDTVQQANYFGSLTQASAIRVG-SYNGEEIYAPFKSILPMVNPDDIVFGGWDISDMNLADAMARARVFDIDLXKQ 730
            I + KV +    Y DNE+ + Y YE   +V +  +G +   V P    Y FK D+  P KLG+ML+G GGNNGSTL   V+AN+  + + TK+ V+Q NYFGS+TQ S +++G    G ++YAPF S+LPMV+P+D V  GWDI++ +L +AM R++V + DL ++
Sbjct:    9 ITSVKVVTDKCTYKDNELLTKYSYENA-VVTKTASGRFD--VTPTVQDYVFKLDLKKPEKLGIMLIGLGGNNGSTLVASVLANKHNVEFQTKEGVKQPNYFGSMTQCSTLKLGIDAEGNDVYAPFNSLLPMVSPNDFVVSGWDINNADLYEAMQRSQVLEYDLQQR 171          
BLAST of FC929050 vs. ExPASy Swiss-Prot
Match: INO1_CANGA (Inositol-3-phosphate synthase OS=Candida glabrata GN=INO1 PE=3 SV=1)

HSP 1 Score: 135.576 bits (340), Expect = 2.704e-31
Identity = 71/155 (45.81%), Postives = 103/155 (66.45%), Query Frame = 2
Query:  269 VKYTDNEIHSVYDYETTELVHENRNGTYQWIVKPKTVKYEFKTDVHVP-KLGVMLVGWGGNNGSTLTGGVIANREGISWATKDT--VQQANYFGSLTQASAIRVG-SYNGEEIYAPFKSILPMVNPDDIVFGGWDISDMNLADAMARARVFDIDL 721
            V Y +NE+ + Y Y T  +VH N + T Q+ V P    Y+FK D++ P +LGVMLVG GGNNGST+   V+AN+  + + T+D   + + NY+GSLTQ+S I++G    G+++Y PF S++PMVNP+D V  GWDI+   +  AM RA V ++DL
Sbjct:   18 VSYKENELLTNYTYHTN-VVHTNSDKT-QFEVTPLDKNYQFKVDLNKPERLGVMLVGLGGNNGSTMMAAVLANKHNVCFRTRDKEGLTEPNYYGSLTQSSTIKLGVDSKGKDVYVPFNSLVPMVNPNDFVVSGWDINGATMDQAMERASVLEVDL 170          
The following BLAST results are available for this feature:
BLAST of FC929050 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 27
Match NameE-valueIdentityDescription
INO1_HUMAN1.581e-3950.62Inositol-3-phosphate synthase 1 OS=Homo sapiens GN... [more]
INO1_MACFA2.065e-3950.62Inositol-3-phosphate synthase 1 OS=Macaca fascicul... [more]
INO1_DROME3.895e-3849.69Inositol-3-phosphate synthase OS=Drosophila melano... [more]
INO1_RAT8.677e-3848.75Inositol-3-phosphate synthase 1 OS=Rattus norvegic... [more]
INO1_CANAL1.061e-3546.88Inositol-3-phosphate synthase OS=Candida albicans ... [more]
INO1_YEAST2.888e-3343.98Inositol-3-phosphate synthase OS=Saccharomyces cer... [more]
INO1_CANGA2.704e-3145.81Inositol-3-phosphate synthase OS=Candida glabrata ... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAH1DD08RM2 PhII-IIIV1 Citrus clementina cDNA clone KN0AAH1DD08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC929050 ID=FC929050; Name=FC929050; organism=Citrus clementina; type=EST; length=730bp
TAGTGTTGAGTCGAGTGGGAAGTGAGAATTGAGAAGGAGAGTCGAGTTCG
GAGACAGCAAGACGAAACAGCTCTTCTTCCAATAAATCTCAAAGCATTTG
TTTGGTTTTATTTAAAGCAATTTTCTCAGCAAACTCTTCTTCTAATAAAT
TTTAAAGCATTTGTTTGGTTTTTATTTAAAGCAATTTTCTCAGCGAAGTT
TTCAATTTTTTCTCTAAAATTTTCCTGGGAAAATGTTTATCGAAAATTTC
AAGGTTGAGAGCCCAAATGTGAAGTACACAGATAATGAGATTCACTCTGT
GTACGATTATGAAACCACTGAGCTTGTTCATGAGAACAGAAATGGCACTT
ATCAGTGGATTGTCAAGCCCAAAACTGTCAAATATGAGTTCAAAACCGAT
GTTCATGTCCCTAAACTTGGGGTTATGCTTGTGGGTTGGGGTGGAAACAA
CGGCTCAACTCTCACGGGTGGTGTTATCGCGAATCGAGAGGGAATCTCCT
GGGCCACAAAGGACACAGTGCAACAAGCCAATTATTTTGGTTCACTTACC
CAAGCATCAGCAATTAGAGTTGGGTCTTACAATGGAGAGGAGATTTATGC
TCCATTCAAGAGCATTCTCCCTATGGTGAACCCAGATGACATTGTGTTTG
GAGGATGGGACATTAGTGACATGAACTTGGCTGATGCCATGGCCAGGGCT
AGAGTGTTTGATATTGATCTTCNAAAGCAA
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