FC929056
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC929056 vs. ExPASy Swiss-Prot
Match: PPIF_MOUSE (Peptidyl-prolyl cis-trans isomerase, mitochondrial OS=Mus musculus GN=Ppif PE=2 SV=1) HSP 1 Score: 134.42 bits (337), Expect = 5.251e-31 Identity = 67/112 (59.82%), Postives = 75/112 (66.96%), Query Frame = 3 Query: 342 SKMPNPKVFFDMTVGGQPAGRIVMELFADVTPRTAENFRALCTGEKGIGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSKFADENFVKKHTGPGILSMANA 677 S NP V+ D+ GQP GR+V+EL ADV P+TAENFRALCTGEKG G YKGS+FHRVIP FMCQ SIYGS+F DENF KH GPG+LSMANA Sbjct: 40 SSSGNPLVYLDVGADGQPLGRVVLELKADVVPKTAENFRALCTGEKGFG-------YKGSTFHRVIPAFMCQAGDFTNHNGTGGRSIYGSRFPDENFTLKHVGPGVLSMANA 144
BLAST of FC929056 vs. ExPASy Swiss-Prot
Match: PPIF_BOVIN (Peptidyl-prolyl cis-trans isomerase, mitochondrial OS=Bos taurus GN=PPIF PE=1 SV=2) HSP 1 Score: 134.035 bits (336), Expect = 6.858e-31 Identity = 67/114 (58.77%), Postives = 77/114 (67.54%), Query Frame = 3 Query: 336 NQSKMPNPKVFFDMTVGGQPAGRIVMELFADVTPRTAENFRALCTGEKGIGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSKFADENFVKKHTGPGILSMANA 677 + S NP V+ D+ GQP GR+V+EL ADV P+TAENFRALCTGEKG G YKGS+FHRVIP FMCQ +SIYGS+F DENF KH GPG+LSMANA Sbjct: 40 SSSSSGNPLVYLDVGADGQPLGRVVLELKADVVPKTAENFRALCTGEKGFG-------YKGSTFHRVIPSFMCQAGDFTNHNGTGGKSIYGSRFPDENFKLKHEGPGVLSMANA 146
BLAST of FC929056 vs. ExPASy Swiss-Prot
Match: PPID_DICDI (Peptidyl-prolyl cis-trans isomerase D, mitochondrial OS=Dictyostelium discoideum GN=cypD PE=1 SV=1) HSP 1 Score: 133.265 bits (334), Expect = 1.170e-30 Identity = 68/106 (64.15%), Postives = 74/106 (69.81%), Query Frame = 3 Query: 360 KVFFDMTVGGQPAGRIVMELFADVTPRTAENFRALCTGEKGIGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSKFADENFVKKHTGPGILSMANA 677 KVFF + G P GR+V EL+ D+ P+TAENFRALCTGEKGIGKSGKPLHYKGSSFHRVI FM Q ESIYG F DENF+ KH G LSMANA Sbjct: 8 KVFFQIKQGNTPLGRVVFELYNDIVPKTAENFRALCTGEKGIGKSGKPLHYKGSSFHRVIKNFMVQGGDFTHGTGIGGESIYGRTFNDENFLVKHK-IGCLSMANA 112
BLAST of FC929056 vs. ExPASy Swiss-Prot
Match: RBP2_HUMAN (E3 SUMO-protein ligase RANBP2 OS=Homo sapiens GN=RANBP2 PE=1 SV=2) HSP 1 Score: 132.494 bits (332), Expect = 1.995e-30 Identity = 66/111 (59.46%), Postives = 75/111 (67.57%), Query Frame = 3 Query: 342 SKMPNPKVFFDMTVGGQPAGRIVMELFADVTPRTAENFRALCTGEKGIGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSKFADENFVKKHTGPGILSMAN 674 SK NP VFFD+ G+P GRI MELF+++ PRTAENFRALCTGEKG G +K S FHRVIP F+CQ +SIYG KF DENF KHTGPG+LSMAN Sbjct: 3059 SKETNPVVFFDVCADGEPLGRITMELFSNIVPRTAENFRALCTGEKGFG-------FKNSIFHRVIPDFVCQGGDITKHDGTGGQSIYGDKFEDENFDVKHTGPGLLSMAN 3162
BLAST of FC929056 vs. ExPASy Swiss-Prot
Match: RBP2_MOUSE (E3 SUMO-protein ligase RANBP2 OS=Mus musculus GN=Ranbp2 PE=1 SV=1) HSP 1 Score: 130.954 bits (328), Expect = 5.806e-30 Identity = 64/111 (57.66%), Postives = 76/111 (68.47%), Query Frame = 3 Query: 342 SKMPNPKVFFDMTVGGQPAGRIVMELFADVTPRTAENFRALCTGEKGIGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSKFADENFVKKHTGPGILSMAN 674 SK NP VFFD+ G+P GRI+MELF+++ P+TAENFRALCTGEKG G +K S FHRV+P F+CQ +SIYG KF DENF KHTGPG+LSMAN Sbjct: 2888 SKDTNPVVFFDVCADGEPLGRIIMELFSNIVPQTAENFRALCTGEKGFG-------FKNSIFHRVVPDFICQGGDITKYNGTGGQSIYGDKFDDENFDLKHTGPGLLSMAN 2991
BLAST of FC929056 vs. ExPASy Swiss-Prot
Match: PPIE_HUMAN (Peptidyl-prolyl cis-trans isomerase E OS=Homo sapiens GN=PPIE PE=1 SV=1) HSP 1 Score: 129.028 bits (323), Expect = 2.206e-29 Identity = 64/116 (55.17%), Postives = 77/116 (66.38%), Query Frame = 3 Query: 330 PINQSKMPNPKVFFDMTVGGQPAGRIVMELFADVTPRTAENFRALCTGEKGIGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSKFADENFVKKHTGPGILSMANA 677 PI + NP+V+ D+ +G +PAGRI M L +DV P TAENFR LCT EKG G +KGSSFHR+IP FMCQ +SIYG KF DENF+ KHTGPG+LSMAN+ Sbjct: 131 PIAKKARSNPQVYMDIKIGNKPAGRIQMLLRSDVVPMTAENFRCLCTHEKGFG-------FKGSSFHRIIPQFMCQGGDFTNHNGTGGKSIYGKKFDDENFILKHTGPGLLSMANS 239
BLAST of FC929056 vs. ExPASy Swiss-Prot
Match: PPID_YARLI (Peptidyl-prolyl cis-trans isomerase D OS=Yarrowia lipolytica GN=CPR6 PE=3 SV=1) HSP 1 Score: 129.028 bits (323), Expect = 2.206e-29 Identity = 64/110 (58.18%), Postives = 75/110 (68.18%), Query Frame = 3 Query: 348 MPNPKVFFDMTVGGQPAGRIVMELFADVTPRTAENFRALCTGEKGIGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSKFADENFVKKHTGPGILSMANA 677 M NP+VFF++ +GG+ G+I ELFAD P+TAENFRALCTGEKG ++G PLH+KGSSFHRVI FM Q ESIYG KF DE F H P +LSMANA Sbjct: 1 MTNPRVFFEVAIGGKTIGKIYFELFADKVPKTAENFRALCTGEKGNTQAGIPLHFKGSSFHRVIKDFMVQGGDFTAGNGTGGESIYGEKFPDEAFPYPHDQPFLLSMANA 110
BLAST of FC929056 vs. ExPASy Swiss-Prot
Match: PPID_ASPFU (Peptidyl-prolyl cis-trans isomerase D OS=Aspergillus fumigatus GN=cpr6 PE=3 SV=1) HSP 1 Score: 129.028 bits (323), Expect = 2.206e-29 Identity = 66/111 (59.46%), Postives = 75/111 (67.57%), Query Frame = 3 Query: 357 PKVFFDMTVGGQPAGRIVMEL----FADVTPRTAENFRALCTGEKGIGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSKFADENFVKKHTGPGILSMANA 677 P+V+FD+ +G Q AGRI +EL F DV P+TAENFRALCTGEKG+GK KPL YKGS FHRVI FM Q ESIYG KF DENF KH P +LSMAN+ Sbjct: 8 PRVYFDIQIGSQKAGRIALELVRLPFNDVVPKTAENFRALCTGEKGVGKQRKPLSYKGSIFHRVIKQFMIQGGDFTNFNGTGGESIYGEKFPDENFELKHDRPFLLSMANS 118
BLAST of FC929056 vs. ExPASy Swiss-Prot
Match: PPIH_NEUCR (Peptidyl-prolyl cis-trans isomerase H OS=Neurospora crassa GN=cyp-3 PE=3 SV=1) HSP 1 Score: 128.642 bits (322), Expect = 2.881e-29 Identity = 65/109 (59.63%), Postives = 73/109 (66.97%), Query Frame = 3 Query: 354 NPKVFFDMTVGGQPAGRIVMELFADVTPRTAENFRALCTGEKGIGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSK-FADENFVKKHTGPGILSMANA 677 NP VFFD+T+GG+P GRI ELF DV PRTAENFR CTGE G+P YKGS FHR+IP FMCQ IYG+K FADENF+ KH PG+LSMANA Sbjct: 11 NPLVFFDITLGGEPLGRITFELFKDVVPRTAENFRQFCTGESK-NNLGRPQGYKGSKFHRIIPNFMCQGGDFLNGDGTGSTCIYGTKSFADENFLLKHDTPGLLSMANA 118
BLAST of FC929056 vs. ExPASy Swiss-Prot
Match: RBP2_BOVIN (E3 SUMO-protein ligase RANBP2 (Fragment) OS=Bos taurus GN=RANBP2 PE=2 SV=2) HSP 1 Score: 127.872 bits (320), Expect = 4.915e-29 Identity = 64/111 (57.66%), Postives = 73/111 (65.77%), Query Frame = 3 Query: 342 SKMPNPKVFFDMTVGGQPAGRIVMELFADVTPRTAENFRALCTGEKGIGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSKFADENFVKKHTGPGILSMAN 674 SK NP VFFD+ +P GRI MELF+++ P+TAENFRALCTGEKG G +K S FHRVIP F+CQ SIYG KF DENF KHTGPG+LSMAN Sbjct: 920 SKETNPVVFFDICADDEPLGRITMELFSNIVPKTAENFRALCTGEKGFG-------FKSSIFHRVIPDFVCQGGDITKHDGTGGRSIYGDKFEDENFDVKHTGPGLLSMAN 1023 The following BLAST results are available for this feature:
BLAST of FC929056 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 156
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Sequences
The
following sequences are available for this feature:
EST sequence >FC929056 ID=FC929056; Name=FC929056; organism=Citrus clementina; type=EST; length=677bpback to top |