FC929059
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC929059 vs. ExPASy Swiss-Prot
Match: NDUS7_MOUSE (NADH dehydrogenase [ubiquinone] iron-sulfur protein 7, mitochondrial OS=Mus musculus GN=Ndufs7 PE=1 SV=1) HSP 1 Score: 236.113 bits (601), Expect = 1.679e-61 Identity = 107/154 (69.48%), Postives = 128/154 (83.12%), Query Frame = 1 Query: 310 AEFVISKLDDVVNYIRRGSIWPMSFGLACCAVEMMHTGAARYDLDRFGIIFRPSPRQSDVMVVAGTLTNKMAPALRKVYDQMPDPRWVISMGSCANXXXXXXXXXXXXXXCDRIVPVDIYVPGCPPTAEALLYGILQLQKKMNRRRDLYYWWTK 771 AE+V++KLDD++N+ RR S+WPM+FGLACCAVEMMH A RYD+DRFG++FR SPRQ+DVM+VAGTLTNKMAPALRKVYDQMP+PR+V+SMGSCAN CDRIVPVDIYVPGCPPTAEALLYGILQLQ+K+ R + L W+ + Sbjct: 71 AEYVVTKLDDLINWARRSSLWPMTFGLACCAVEMMHMAAPRYDMDRFGVVFRASPRQADVMIVAGTLTNKMAPALRKVYDQMPEPRYVVSMGSCANGGGYYHYSYSVVRGCDRIVPVDIYVPGCPPTAEALLYGILQLQRKIKREQKLKIWYRR 224
BLAST of FC929059 vs. ExPASy Swiss-Prot
Match: NUOB_METFK (NADH-quinone oxidoreductase subunit B OS=Methylobacillus flagellatus (strain KT / ATCC 51484 / DSM 6875) GN=nuoB PE=3 SV=1) HSP 1 Score: 231.491 bits (589), Expect = 4.136e-60 Identity = 108/142 (76.06%), Postives = 118/142 (83.10%), Query Frame = 1 Query: 316 FVISKLDDVVNYIRRGSIWPMSFGLACCAVEMMHTGAARYDLDRFGIIFRPSPRQSDVMVVAGTLTNKMAPALRKVYDQMPDPRWVISMGSCANXXXXXXXXXXXXXXCDRIVPVDIYVPGCPPTAEALLYGILQLQKKMNR 741 FV + LD V+NY R GS+WPM+FGLACCAVEMMH GAARYDLDRFGI+FRPSPRQSDVM+VAGTL NKMAPALRKVYDQM +PRWVISMGSCAN CDRIVPVD+YVPGCPPTAEALLYGI+QLQ K+ R Sbjct: 11 FVTTTLDTVINYTRTGSLWPMTFGLACCAVEMMHAGAARYDLDRFGIVFRPSPRQSDVMIVAGTLVNKMAPALRKVYDQMAEPRWVISMGSCANGGGYYHYSYAVVRGCDRIVPVDVYVPGCPPTAEALLYGIIQLQNKIKR 152
BLAST of FC929059 vs. ExPASy Swiss-Prot
Match: NUOB2_ACIF5 (NADH-quinone oxidoreductase subunit B 2 OS=Acidithiobacillus ferrooxidans (strain ATCC 53993) GN=nuoB2 PE=3 SV=1) HSP 1 Score: 230.335 bits (586), Expect = 9.214e-60 Identity = 107/142 (75.35%), Postives = 120/142 (84.51%), Query Frame = 1 Query: 316 FVISKLDDVVNYIRRGSIWPMSFGLACCAVEMMHTGAARYDLDRFGIIFRPSPRQSDVMVVAGTLTNKMAPALRKVYDQMPDPRWVISMGSCANXXXXXXXXXXXXXXCDRIVPVDIYVPGCPPTAEALLYGILQLQKKMNR 741 FV + +D VVN+ R GS+WPM+FGLACCAVEMMH GAARYDLDRFGI+FRPSPRQSDVM+VAGTL NKMAPALRKVYDQMP+PRWV+SMGSCAN CDRIVPVDIYVPGCPPTAEALL+G++QLQKK+ R Sbjct: 11 FVTTTIDTVVNWGRTGSLWPMTFGLACCAVEMMHAGAARYDLDRFGIVFRPSPRQSDVMIVAGTLVNKMAPALRKVYDQMPEPRWVVSMGSCANGGGYYHYSYSIVRGCDRIVPVDIYVPGCPPTAEALLFGLVQLQKKIRR 152
BLAST of FC929059 vs. ExPASy Swiss-Prot
Match: NUOB_ACIF2 (NADH-quinone oxidoreductase subunit B OS=Acidithiobacillus ferrooxidans (strain ATCC 23270 / DSM 14882 / NCIB 8455) GN=nuoB PE=3 SV=1) HSP 1 Score: 228.794 bits (582), Expect = 2.681e-59 Identity = 104/142 (73.24%), Postives = 120/142 (84.51%), Query Frame = 1 Query: 316 FVISKLDDVVNYIRRGSIWPMSFGLACCAVEMMHTGAARYDLDRFGIIFRPSPRQSDVMVVAGTLTNKMAPALRKVYDQMPDPRWVISMGSCANXXXXXXXXXXXXXXCDRIVPVDIYVPGCPPTAEALLYGILQLQKKMNR 741 FV + +D VVN+ R GS+WPM+FGLACCAVEMMH GAARYDLDRFG++FRPSPRQSD+M+VAGTL NKMAPALRKVYDQMP+PRWV+SMGSCAN CDRIVPVDIYVPGCPPTAEAL++G++QLQKK+ R Sbjct: 11 FVTTSIDTVVNWSRTGSLWPMTFGLACCAVEMMHAGAARYDLDRFGLLFRPSPRQSDLMIVAGTLVNKMAPALRKVYDQMPEPRWVVSMGSCANGGGYYHYSYSVVRGCDRIVPVDIYVPGCPPTAEALIFGLIQLQKKIRR 152
BLAST of FC929059 vs. ExPASy Swiss-Prot
Match: NUOB1_ACIF5 (NADH-quinone oxidoreductase subunit B 1 OS=Acidithiobacillus ferrooxidans (strain ATCC 53993) GN=nuoB1 PE=3 SV=1) HSP 1 Score: 228.794 bits (582), Expect = 2.681e-59 Identity = 104/142 (73.24%), Postives = 120/142 (84.51%), Query Frame = 1 Query: 316 FVISKLDDVVNYIRRGSIWPMSFGLACCAVEMMHTGAARYDLDRFGIIFRPSPRQSDVMVVAGTLTNKMAPALRKVYDQMPDPRWVISMGSCANXXXXXXXXXXXXXXCDRIVPVDIYVPGCPPTAEALLYGILQLQKKMNR 741 FV + +D VVN+ R GS+WPM+FGLACCAVEMMH GAARYDLDRFG++FRPSPRQSD+M+VAGTL NKMAPALRKVYDQMP+PRWV+SMGSCAN CDRIVPVDIYVPGCPPTAEAL++G++QLQKK+ R Sbjct: 11 FVTTSIDTVVNWSRTGSLWPMTFGLACCAVEMMHAGAARYDLDRFGLLFRPSPRQSDLMIVAGTLVNKMAPALRKVYDQMPEPRWVVSMGSCANGGGYYHYSYSVVRGCDRIVPVDIYVPGCPPTAEALIFGLIQLQKKIRR 152
BLAST of FC929059 vs. ExPASy Swiss-Prot
Match: NUOB_RHORT (NADH-quinone oxidoreductase subunit B OS=Rhodospirillum rubrum (strain ATCC 11170 / NCIB 8255) GN=nuoB PE=3 SV=1) HSP 1 Score: 227.639 bits (579), Expect = 5.972e-59 Identity = 106/147 (72.11%), Postives = 120/147 (81.63%), Query Frame = 1 Query: 316 FVISKLDDVVNYIRRGSIWPMSFGLACCAVEMMHTGAARYDLDRFGIIFRPSPRQSDVMVVAGTLTNKMAPALRKVYDQMPDPRWVISMGSCANXXXXXXXXXXXXXXCDRIVPVDIYVPGCPPTAEALLYGILQLQKKMNRRRDLY 756 FV+S +D +VN+ R GS+WPM+FGLACCA+EM+H ARYDLDRFG +FRPSPRQSDVM+VAGTLTNKMAPALRKVYDQM +PRWVISMGSCAN CDRIVPVDIYVPGCPPT+EALLYG+LQLQKK+ R LY Sbjct: 38 FVLSNVDSLVNWARAGSLWPMTFGLACCALEMIHCACARYDLDRFGTVFRPSPRQSDVMIVAGTLTNKMAPALRKVYDQMAEPRWVISMGSCANGGGYYHYSYSVVRGCDRIVPVDIYVPGCPPTSEALLYGVLQLQKKIKRTGALY 184
BLAST of FC929059 vs. ExPASy Swiss-Prot
Match: NUOB_THIDA (NADH-quinone oxidoreductase subunit B OS=Thiobacillus denitrificans (strain ATCC 25259) GN=nuoB PE=3 SV=1) HSP 1 Score: 226.868 bits (577), Expect = 1.019e-58 Identity = 105/142 (73.94%), Postives = 119/142 (83.80%), Query Frame = 1 Query: 316 FVISKLDDVVNYIRRGSIWPMSFGLACCAVEMMHTGAARYDLDRFGIIFRPSPRQSDVMVVAGTLTNKMAPALRKVYDQMPDPRWVISMGSCANXXXXXXXXXXXXXXCDRIVPVDIYVPGCPPTAEALLYGILQLQKKMNR 741 FV +K D ++NY+R GS+WPM+FGLACCAVEMM GA+RYDLDRFGI+FRPSPRQSDVM+VAGTL NKMAPALRKVYDQM +PRWVISMGSCAN CDRIVPVDIYVPGCPPTAEAL++GI+QLQKK+ R Sbjct: 11 FVTTKADQLINYMRTGSMWPMTFGLACCAVEMMQAGASRYDLDRFGIVFRPSPRQSDVMIVAGTLCNKMAPALRKVYDQMAEPRWVISMGSCANGGGYYHYSYSVVRGCDRIVPVDIYVPGCPPTAEALIFGIIQLQKKIRR 152
BLAST of FC929059 vs. ExPASy Swiss-Prot
Match: NDUS7_CAEEL (Probable NADH dehydrogenase [ubiquinone] iron-sulfur protein 7, mitochondrial OS=Caenorhabditis elegans GN=W10D5.2 PE=2 SV=1) HSP 1 Score: 226.868 bits (577), Expect = 1.019e-58 Identity = 99/157 (63.06%), Postives = 127/157 (80.89%), Query Frame = 1 Query: 301 SKTAEFVISKLDDVVNYIRRGSIWPMSFGLACCAVEMMHTGAARYDLDRFGIIFRPSPRQSDVMVVAGTLTNKMAPALRKVYDQMPDPRWVISMGSCANXXXXXXXXXXXXXXCDRIVPVDIYVPGCPPTAEALLYGILQLQKKMNRRRDLYYWWTK 771 S AE+ +++LDDV+N +RGSIWP++FGLACCAVEMMH A RYD+DR+G++FR SPRQ+D++ VAGT+TNKMAPALR++YDQMP+ +WVISMGSCAN CDR++PVDIYVPGCPPTAEALLYG+LQLQKK+ R+R+ W+ + Sbjct: 43 SSKAEYALARLDDVLNLAQRGSIWPLTFGLACCAVEMMHFAAPRYDMDRYGVVFRASPRQADLIFVAGTVTNKMAPALRRIYDQMPEAKWVISMGSCANGGGYYHYAYSVLRGCDRVIPVDIYVPGCPPTAEALLYGVLQLQKKIKRKREAQLWYRR 199
BLAST of FC929059 vs. ExPASy Swiss-Prot
Match: NUOB_THISH (NADH-quinone oxidoreductase subunit B OS=Thioalkalivibrio sp. (strain HL-EbGR7) GN=nuoB PE=3 SV=1) HSP 1 Score: 226.483 bits (576), Expect = 1.330e-58 Identity = 105/142 (73.94%), Postives = 117/142 (82.39%), Query Frame = 1 Query: 316 FVISKLDDVVNYIRRGSIWPMSFGLACCAVEMMHTGAARYDLDRFGIIFRPSPRQSDVMVVAGTLTNKMAPALRKVYDQMPDPRWVISMGSCANXXXXXXXXXXXXXXCDRIVPVDIYVPGCPPTAEALLYGILQLQKKMNR 741 FV + D ++N+ R GS+WPM+FGLACCAVEMMH GA+RYDLDRFG++FRPSPRQSDVM+VAGTL NKMAPALRKVYDQM +PRWVISMGSCAN CDRIVPVDIYVPGCPPTAEALLYGILQLQ K+ R Sbjct: 11 FVTTSADKLINWARTGSLWPMTFGLACCAVEMMHAGASRYDLDRFGVVFRPSPRQSDVMIVAGTLVNKMAPALRKVYDQMAEPRWVISMGSCANGGGYYHYSYAVVRGCDRIVPVDIYVPGCPPTAEALLYGILQLQNKIRR 152
BLAST of FC929059 vs. ExPASy Swiss-Prot
Match: NUOB_NEOSM (NADH-quinone oxidoreductase subunit B OS=Neorickettsia sennetsu (strain Miyayama) GN=nuoB PE=3 SV=1) HSP 1 Score: 226.483 bits (576), Expect = 1.330e-58 Identity = 103/145 (71.03%), Postives = 125/145 (86.21%), Query Frame = 1 Query: 316 FVISKLDDVVNYIRRGSIWPMSFGLACCAVEMMHTGAARYDLDRFGIIFRPSPRQSDVMVVAGTLTNKMAPALRKVYDQMPDPRWVISMGSCANXXXXXXXXXXXXXXCDRIVPVDIYVPGCPPTAEALLYGILQLQKKMNRRRD 750 ++++KLDD++N+ R GS+WPM+FGLACCAVEMMH A+RYD+DRFG+IFRPSPRQSDVM+VAGTLTNKMAPALR+VYDQM +P++VISMGSCAN CDRIVPVD+YVPGCPPTAEALLYG+L LQKK+NR+R+ Sbjct: 19 YLVAKLDDLINWARSGSLWPMTFGLACCAVEMMHFTASRYDMDRFGMIFRPSPRQSDVMIVAGTLTNKMAPALRRVYDQMAEPKYVISMGSCANGGGYYHYSYSVVRGCDRIVPVDVYVPGCPPTAEALLYGVLCLQKKINRQRN 163 The following BLAST results are available for this feature:
BLAST of FC929059 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC929059 ID=FC929059; Name=FC929059; organism=Citrus clementina; type=EST; length=789bpback to top |