FC929067

Overview
NameFC929067
Unique NameFC929067
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length602
Libraries
Library NameType
PhII-IIIV1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC929067 vs. ExPASy Swiss-Prot
Match: TCMO_ZINEL (Trans-cinnamate 4-monooxygenase OS=Zinnia elegans GN=CYP73A12 PE=2 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 1.360e-13
Identity = 36/96 (37.50%), Postives = 57/96 (59.38%), Query Frame = 2
Query:   14 IDGYHIPAKTTVFVNVLAIGRDGQVWDKPDEFIPERFVG--SNIDMGGQNFEFIPFGAGRRICAGSPIAMPIVELALANLLYKFDWKMPHGM-KID 292
            + GY IPA++ + VN   +  +   W KP+EF PERF+   S ++  G +F ++PFG GRR C G  +A+PI+ + +  L+  F+   P G  K+D
Sbjct:  385 LGGYDIPAESKILVNAWWLANNPDQWKKPEEFRPERFLEEESKVEANGNDFRYLPFGVGRRSCPGIILALPILGITIGRLVQNFELLPPPGQDKVD 480          
BLAST of FC929067 vs. ExPASy Swiss-Prot
Match: TCMO_CICAR (Trans-cinnamate 4-monooxygenase OS=Cicer arietinum GN=CYP73A19 PE=2 SV=2)

HSP 1 Score: 76.2554 bits (186), Expect = 1.360e-13
Identity = 37/96 (38.54%), Postives = 58/96 (60.42%), Query Frame = 2
Query:   14 IDGYHIPAKTTVFVNVLAIGRDGQVWDKPDEFIPERFVG--SNIDMGGQNFEFIPFGAGRRICAGSPIAMPIVELALANLLYKFDWKMPHGM-KID 292
            + G+ IPA++ + VN   +  +   W KP+EF PERF+   S+++  G +F ++PFG GRR C G  +A+PI+ + L  L+  F+   P G  KID
Sbjct:  384 LSGFDIPAESKILVNAWWLANNPAQWKKPEEFRPERFLEEESHVEANGNDFRYLPFGVGRRSCPGIILALPILGITLGRLVQNFELLPPPGQSKID 479          
BLAST of FC929067 vs. ExPASy Swiss-Prot
Match: TCMO_POPKI (Trans-cinnamate 4-monooxygenase OS=Populus kitakamiensis GN=CYP73A16 PE=2 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 3.029e-13
Identity = 36/96 (37.50%), Postives = 57/96 (59.38%), Query Frame = 2
Query:   14 IDGYHIPAKTTVFVNVLAIGRDGQVWDKPDEFIPERFV--GSNIDMGGQNFEFIPFGAGRRICAGSPIAMPIVELALANLLYKFDWKMPHGM-KID 292
            + G+ IPA++ + VN   +  +   W  P+EF PERF+  G+ ++  G +F ++PFG GRR C G  +A+PI+ + L  L+  F+   P G  KID
Sbjct:  385 LGGFDIPAESKILVNAWWLANNPAHWKNPEEFRPERFLEEGAKVEANGNDFRYLPFGVGRRSCPGIILALPILGITLGRLVQNFELLPPPGQSKID 480          
BLAST of FC929067 vs. ExPASy Swiss-Prot
Match: TCMO_PHAAU (Trans-cinnamate 4-monooxygenase OS=Phaseolus aureus GN=CYP73A2 PE=1 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 3.029e-13
Identity = 35/91 (38.46%), Postives = 54/91 (59.34%), Query Frame = 2
Query:   14 IDGYHIPAKTTVFVNVLAIGRDGQVWDKPDEFIPERFVG--SNIDMGGQNFEFIPFGAGRRICAGSPIAMPIVELALANLLYKFDWKMPHG 280
            + GY IPA++ + VN   +  +   W KP+EF PERF    S+++  G +F ++PFG GRR C G  +A+PI+ + L  L+  F+   P G
Sbjct:  385 LGGYDIPAESKILVNAWWLANNPAHWKKPEEFRPERFFEEESHVEANGNDFRYLPFGVGRRSCPGIILALPILGITLGRLVQNFELLPPPG 475          
BLAST of FC929067 vs. ExPASy Swiss-Prot
Match: TCMO_PEA (Trans-cinnamate 4-monooxygenase OS=Pisum sativum GN=CYP73A9 PE=2 SV=2)

HSP 1 Score: 75.0998 bits (183), Expect = 3.029e-13
Identity = 35/96 (36.46%), Postives = 59/96 (61.46%), Query Frame = 2
Query:   14 IDGYHIPAKTTVFVNVLAIGRDGQVWDKPDEFIPERFVG--SNIDMGGQNFEFIPFGAGRRICAGSPIAMPIVELALANLLYKFDWKMPHGM-KID 292
            + G+ IPA++ + VN   +  +  +W KP+EF PERF+   ++++  G +F ++PFG GRR C G  +A+PI+ + +  L+  F+   P G  KID
Sbjct:  385 LGGFDIPAESKILVNAWWLANNPALWKKPEEFRPERFLEEEAHVEANGNDFRYLPFGVGRRSCPGIILALPILGITIGRLVQNFELLPPPGQSKID 480          
BLAST of FC929067 vs. ExPASy Swiss-Prot
Match: TCMO_GLYEC (Trans-cinnamate 4-monooxygenase OS=Glycyrrhiza echinata GN=CYP73A14 PE=2 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 3.029e-13
Identity = 36/96 (37.50%), Postives = 58/96 (60.42%), Query Frame = 2
Query:   14 IDGYHIPAKTTVFVNVLAIGRDGQVWDKPDEFIPERFVG--SNIDMGGQNFEFIPFGAGRRICAGSPIAMPIVELALANLLYKFDWKMPHGM-KID 292
            + GY IPA++ + VN   +  +   W +P+EF PERF+   S+++  G +F ++PFG GRR C G  +A+PI+ + L  L+  F+   P G  K+D
Sbjct:  385 LGGYDIPAESKILVNAWWLANNPANWKRPEEFRPERFLEEESHVEANGNDFRYLPFGVGRRSCPGIILALPILGITLGRLVQNFELLPPPGQSKLD 480          
BLAST of FC929067 vs. ExPASy Swiss-Prot
Match: TCMO_ARATH (Trans-cinnamate 4-monooxygenase OS=Arabidopsis thaliana GN=CYP73A5 PE=2 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 3.029e-13
Identity = 35/94 (37.23%), Postives = 56/94 (59.57%), Query Frame = 2
Query:   20 GYHIPAKTTVFVNVLAIGRDGQVWDKPDEFIPERFVG--SNIDMGGQNFEFIPFGAGRRICAGSPIAMPIVELALANLLYKFDWKMPHGM-KID 292
            GY IPA++ + VN   +  +   W KP+EF PERF    S+++  G +F ++PFG GRR C G  +A+PI+ + +  ++  F+   P G  K+D
Sbjct:  387 GYDIPAESKILVNAWWLANNPNSWKKPEEFRPERFFEEESHVEANGNDFRYVPFGVGRRSCPGIILALPILGITIGRMVQNFELLPPPGQSKVD 480          
BLAST of FC929067 vs. ExPASy Swiss-Prot
Match: CP2U1_RAT (Cytochrome P450 2U1 OS=Rattus norvegicus GN=Cyp2u1 PE=1 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 3.029e-13
Identity = 39/96 (40.62%), Postives = 55/96 (57.29%), Query Frame = 2
Query:    2 EKCVIDGYHIPAKTTVFVNVLAIGRDGQVWDKPDEFIPERFVGSNIDMGGQNFE---FIPFGAGRRICAGSPIAMPIVELALANLLYKFDWKMPHG 280
            EK V+ GY IP  T V  N+ +I RD  +W+KPD+F P RF    +D  GQ  +   FIPFG G+R+C G  +A   + L   +L+  F + +P G
Sbjct:  413 EKTVLQGYSIPKGTVVLPNLWSIHRDPVIWEKPDDFCPHRF----LDDQGQLLKRETFIPFGIGKRVCMGEQLAKMELFLMFVSLMQSFTFALPEG 504          
BLAST of FC929067 vs. ExPASy Swiss-Prot
Match: TCMO_HELTU (Trans-cinnamate 4-monooxygenase OS=Helianthus tuberosus GN=CYP73A1 PE=1 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 3.957e-13
Identity = 34/98 (34.69%), Postives = 56/98 (57.14%), Query Frame = 2
Query:   14 IDGYHIPAKTTVFVNVLAIGRDGQVWDKPDEFIPERFVG--SNIDMGGQNFEFIPFGAGRRICAGSPIAMPIVELALANLLYKFDWKMPHGMKIDDLD 301
            + G+ IPA++ + VN   +  +   W KP+EF PERF+   + ++  G +F ++PFG GRR C G  +A+PI+ + +  L+  F+   P G    D D
Sbjct:  385 LGGFDIPAESKILVNAWWLANNPDQWKKPEEFRPERFLEEEAKVEANGNDFRYLPFGVGRRSCPGIILALPILGITIGRLVQNFELLPPPGQSKIDTD 482          
BLAST of FC929067 vs. ExPASy Swiss-Prot
Match: CP2U1_MOUSE (Cytochrome P450 2U1 OS=Mus musculus GN=Cyp2u1 PE=2 SV=2)

HSP 1 Score: 74.7146 bits (182), Expect = 3.957e-13
Identity = 37/96 (38.54%), Postives = 56/96 (58.33%), Query Frame = 2
Query:    2 EKCVIDGYHIPAKTTVFVNVLAIGRDGQVWDKPDEFIPERFVGSNIDMGGQNFE---FIPFGAGRRICAGSPIAMPIVELALANLLYKFDWKMPHG 280
            EK V+ G+ IP  T V +N+ ++ RD  +W+KPD+F P RF    +D  GQ  +   FIPFG G+R+C G  +A   + L   +L+  F + +P G
Sbjct:  413 EKTVLQGFTIPKGTVVLINLWSVHRDPAIWEKPDDFCPHRF----LDDQGQLLKRETFIPFGIGKRVCMGEQLAKMELFLMFVSLMQTFTFALPEG 504          
The following BLAST results are available for this feature:
BLAST of FC929067 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 146
Match NameE-valueIdentityDescription
TCMO_ZINEL1.360e-1337.50Trans-cinnamate 4-monooxygenase OS=Zinnia elegans ... [more]
TCMO_CICAR1.360e-1338.54Trans-cinnamate 4-monooxygenase OS=Cicer arietinum... [more]
TCMO_POPKI3.029e-1337.50Trans-cinnamate 4-monooxygenase OS=Populus kitakam... [more]
TCMO_PHAAU3.029e-1338.46Trans-cinnamate 4-monooxygenase OS=Phaseolus aureu... [more]
TCMO_PEA3.029e-1336.46Trans-cinnamate 4-monooxygenase OS=Pisum sativum G... [more]
TCMO_GLYEC3.029e-1337.50Trans-cinnamate 4-monooxygenase OS=Glycyrrhiza ech... [more]
TCMO_ARATH3.029e-1337.23Trans-cinnamate 4-monooxygenase OS=Arabidopsis tha... [more]
CP2U1_RAT3.029e-1340.63Cytochrome P450 2U1 OS=Rattus norvegicus GN=Cyp2u1... [more]
TCMO_HELTU3.957e-1334.69Trans-cinnamate 4-monooxygenase OS=Helianthus tube... [more]
CP2U1_MOUSE3.957e-1338.54Cytochrome P450 2U1 OS=Mus musculus GN=Cyp2u1 PE=2... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAH1DE05RM2 PhII-IIIV1 Citrus clementina cDNA clone KN0AAH1DE05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC929067 ID=FC929067; Name=FC929067; organism=Citrus clementina; type=EST; length=602bp
AGAAAAGTGCGTTATCGATGGTTATCACATACCAGCTAAGACAACGGTTT
TCGTTAATGTGCTGGCAATAGGAAGGGACGGCCAAGTTTGGGATAAACCC
GACGAATTTATTCCTGAGAGATTTGTGGGCTCTAATATTGATATGGGAGG
GCAAAACTTTGAATTTATTCCATTTGGTGCCGGTAGAAGAATTTGTGCAG
GATCACCTATAGCAATGCCGATTGTGGAGCTTGCACTTGCCAATCTTCTT
TACAAATTTGATTGGAAAATGCCTCATGGAATGAAGATTGATGACTTGGA
CTTTGAGGCTACGCCTGGTCTTACCCAGCACAAGAAAAAGCCTCTCAAGC
TCGTGGCAACCAAATCTATATGATGGTTTAGTCATTAGTGTCGTGATTTA
AAATAAGTTTGCATGCAAGCACTTTTCTTTACGGTTATTGTTTGTTCGAG
GATCATAATATGTAACGGTGAGGGGTGCTACCCAGCTCTCTTTTAAAGCC
AAAGCTCATAATGCTTTTCTAGCTAGATTGCTTTTGCTTTTTGTTTCTTT
TAGTGATTTAATAAAATTTTAGCCCAATTGAAATCAAAAAAAAAAAAAAA
AA
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