FC929067

Overview
NameFC929067
Unique NameFC929067
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length602
Libraries
Library NameType
PhII-IIIV1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC929067 vs. ExPASy Swiss-Prot
Match: KO1_ARATH (Ent-kaurene oxidase OS=Arabidopsis thaliana GN=KO1 PE=1 SV=2)

HSP 1 Score: 74.3294 bits (181), Expect = 5.168e-13
Identity = 38/118 (32.20%), Postives = 67/118 (56.78%), Query Frame = 2
Query:    2 EKCVIDGYHIPAKTTVFVNVLAIGRDGQVWDKPDEFIPERFVGSNIDMGGQNFEFIPFGAGRRICAGSPIAMPIVELALANLLYKFDWKMPHGMKIDDLDFEATPGLTQHKKKPLKLV 355
            E   I GYH+PA + + +N+     D + W++P+++ PERF+           + + FGAG+R+CAG+  A  +  +A+  L+ +F+WK+  G + +++D   T GLT  K  PL  +
Sbjct:  390 EDTQIGGYHVPAGSEIAINIYGCNMDKKRWERPEDWWPERFLDDGKYETSDLHKTMAFGAGKRVCAGALQASLMAGIAIGRLVQEFEWKLRDGEE-ENVD---TYGLTSQKLYPLMAI 503          
BLAST of FC929067 vs. ExPASy Swiss-Prot
Match: TCMO_SOYBN (Trans-cinnamate 4-monooxygenase OS=Glycine max GN=CYP73A11 PE=2 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 8.814e-13
Identity = 35/91 (38.46%), Postives = 53/91 (58.24%), Query Frame = 2
Query:   14 IDGYHIPAKTTVFVNVLAIGRDGQVWDKPDEFIPERFVG--SNIDMGGQNFEFIPFGAGRRICAGSPIAMPIVELALANLLYKFDWKMPHG 280
            + GY IPA++ + VN   +  +   W KP+EF PERF    S ++  G +F ++PFG GRR C G  +A+PI+ + L  L+  F+   P G
Sbjct:  386 LGGYDIPAESKILVNAWWLANNPAHWKKPEEFRPERFFEEESLVEANGNDFRYLPFGVGRRSCPGIILALPILGITLGRLVQNFELLPPPG 476          
BLAST of FC929067 vs. ExPASy Swiss-Prot
Match: C79A2_ARATH (Phenylalanine N-hydroxylase OS=Arabidopsis thaliana GN=CYP79A2 PE=1 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 8.814e-13
Identity = 39/97 (40.21%), Postives = 55/97 (56.70%), Query Frame = 2
Query:   11 VIDGYHIPAKTTVFVNVLAIGRDGQVWDKPDEFIPERFVGSN--IDMGGQNFEFIPFGAGRRICAGSPIAMPIVELALANLLYKFDW-KMPHGMKID 292
            V+DGY IP  + V ++ + IGR+  VWDKP +F PER + +N  +D+   +   I F AGRR C G  I   +  + LA L+  F W  +P   KID
Sbjct:  404 VVDGYFIPKGSHVLISRMGIGRNPSVWDKPHKFDPERHLSTNTCVDLNESDLNIISFSAGRRGCMGVDIGSAMTYMLLARLIQGFTWLPVPGKNKID 500          
BLAST of FC929067 vs. ExPASy Swiss-Prot
Match: C71AS_ARATH (Putative cytochrome P450 71A28 OS=Arabidopsis thaliana GN=CYP71A28 PE=3 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 8.814e-13
Identity = 38/97 (39.18%), Postives = 56/97 (57.73%), Query Frame = 2
Query:   47 VFVNVLAIGRDGQVWDK-PDEFIPERFVGSNIDMGGQNFEFIPFGAGRRICAGSPIAMPIVELALANLLYKFDWKMPHGMKIDDLDFEATPGLTQHK 334
            VF+N  AI RD + W    +EF PER +   ++  GQ+F FIPFG+GRR+C     A  ++E+ LAN +Y+F+W++      DD   + T     HK
Sbjct:  378 VFINAWAIHRDTEKWGPYAEEFKPERHLDLPLNFQGQDFNFIPFGSGRRLCPDIDFATMLIEVGLANFVYRFNWRVETRPLGDDDGLKQTGMEVCHK 474          
BLAST of FC929067 vs. ExPASy Swiss-Prot
Match: TCMO_POPTM (Trans-cinnamate 4-monooxygenase OS=Populus tremuloides GN=CYP73A13 PE=2 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 2.565e-12
Identity = 35/96 (36.46%), Postives = 56/96 (58.33%), Query Frame = 2
Query:   14 IDGYHIPAKTTVFVNVLAIGRDGQVWDKPDEFIPERFVG--SNIDMGGQNFEFIPFGAGRRICAGSPIAMPIVELALANLLYKFDWKMPHGM-KID 292
            + G+ IPA++ + VN   +  +   W  P+EF PERF+   + ++  G +F ++PFG GRR C G  +A+PI+ + L  L+  F+   P G  KID
Sbjct:  385 LGGFDIPAESKILVNAWWLANNPAHWKNPEEFRPERFLEEEAKVEANGNDFRYLPFGVGRRSCPGIILALPILGITLGRLVQNFELLPPPGQSKID 480          
BLAST of FC929067 vs. ExPASy Swiss-Prot
Match: TCMO_MEDSA (Trans-cinnamate 4-monooxygenase OS=Medicago sativa GN=CYP73A3 PE=2 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 2.565e-12
Identity = 35/96 (36.46%), Postives = 58/96 (60.42%), Query Frame = 2
Query:   14 IDGYHIPAKTTVFVNVLAIGRDGQVWDKPDEFIPERFVG--SNIDMGGQNFEFIPFGAGRRICAGSPIAMPIVELALANLLYKFDWKMPHGM-KID 292
            ++G+ IPA++ + VN   +  +   W KP+EF PERF+   S+++  G +F ++PFG GRR C G  +A+PI+ + +  L+   +   P G  KID
Sbjct:  386 LNGFDIPAESKILVNAWWLPNNPAHWKKPEEFRPERFLEEESHVEANGNDFRYLPFGVGRRSCPGIILALPILGITIGRLVQNVELLPPPGQSKID 481          
BLAST of FC929067 vs. ExPASy Swiss-Prot
Match: C71AR_ARATH (Cytochrome P450 71A27 OS=Arabidopsis thaliana GN=CYP71A27 PE=2 SV=3)

HSP 1 Score: 71.2478 bits (173), Expect = 4.375e-12
Identity = 41/117 (35.04%), Postives = 63/117 (53.85%), Query Frame = 2
Query:    2 EKCVIDGYHIPAKTTVFVNVLAIGRDGQVWD-KPDEFIPERFVGSNIDMGGQNFEFIPFGAGRRICAGSPIAMPIVELALANLLYKFDWKMPHGMKIDDL-DFEATPGLTQHKKKPL 346
            E   + GY I A T V +N  A+ R+  +W    +E+ PER           + +F+PFGAGRR+C G   ++ + +LALANL+ +F+W++  G   DD  D     G+   +K PL
Sbjct:  373 EDVQLKGYDISAGTHVIINAWALQRNPAIWGLDANEYRPERHFWYEFGFQRTDSKFVPFGAGRRLCPGIGFSLVLSKLALANLVKRFNWRLKVGPVGDDKPDLAEASGIDVCRKFPL 489          
BLAST of FC929067 vs. ExPASy Swiss-Prot
Match: CP17A_CAVPO (Steroid 17-alpha-hydroxylase/17,20 lyase OS=Cavia porcellus GN=CYP17A1 PE=1 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 9.746e-12
Identity = 39/99 (39.39%), Postives = 58/99 (58.59%), Query Frame = 2
Query:   14 IDGYHIPAKTTVFVNVLAIGRDGQVWDKPDEFIPERFV---GSNIDMGGQNFEFIPFGAGRRICAGSPIAMPIVELALANLLYKFDWKMPHGMKIDDLD 301
            I  + I   T V VN+ A+  + Q WD+PD+F+PERF+   GS I +   ++  +PFGAG R C G  +A   + L  A LL KFD ++P G ++  L+
Sbjct:  381 IGEFAIDKDTNVLVNLWALHHNEQEWDRPDQFMPERFLDPTGSQIIVPSSSY--LPFGAGPRSCVGEALARQEIFLITAWLLQKFDLEVPEGGQLPSLE 477          
BLAST of FC929067 vs. ExPASy Swiss-Prot
Match: TCMO_RUTGR (Trans-cinnamate 4-monooxygenase OS=Ruta graveolens GN=CYP73A2 PE=2 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 1.273e-11
Identity = 35/94 (37.23%), Postives = 53/94 (56.38%), Query Frame = 2
Query:   20 GYHIPAKTTVFVNVLAIGRDGQVWDKPDEFIPERFVG--SNIDMGGQNFEFIPFGAGRRICAGSPIAMPIVELALANLLYKFDWKMPHGM-KID 292
            GY IPA++ + VN   +  +   W  P  F PERF+   S ++  G +F +IPFG GRR C G  +A+PI+ + +  ++  F+   P G  KID
Sbjct:  387 GYDIPAESKILVNAWWLANNPAHWKDPQVFRPERFLEEESGVEANGNDFRYIPFGVGRRSCPGIILALPILGITIGRMVQNFELLPPPGQSKID 480          
BLAST of FC929067 vs. ExPASy Swiss-Prot
Match: CP2U1_BOVIN (Cytochrome P450 2U1 OS=Bos taurus GN=CYP2U1 PE=2 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 1.662e-11
Identity = 35/98 (35.71%), Postives = 56/98 (57.14%), Query Frame = 2
Query:    2 EKCVIDGYHIPAKTTVFVNVLAIGRDGQVWDKPDEFIPERFVGSNIDMGGQNFE---FIPFGAGRRICAGSPIAMPIVELALANLLYKFDWKMPHGMK 286
            EK V+ G+ IP  T +  N+ ++ RD  +W+KP++F P+RF    +D  GQ  +   FIPFG G+R+C G  +A   + L   +L+  F + +P   K
Sbjct:  427 EKTVLQGFTIPKGTIILPNLWSVHRDPAIWEKPNDFYPDRF----LDDQGQLIKKETFIPFGIGKRVCMGEQLAKMELFLMFVSLMQSFTFVLPKDSK 520          
The following BLAST results are available for this feature:
BLAST of FC929067 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 146
Match NameE-valueIdentityDescription
KO1_ARATH5.168e-1332.20Ent-kaurene oxidase OS=Arabidopsis thaliana GN=KO1... [more]
TCMO_SOYBN8.814e-1338.46Trans-cinnamate 4-monooxygenase OS=Glycine max GN=... [more]
C79A2_ARATH8.814e-1340.21Phenylalanine N-hydroxylase OS=Arabidopsis thalian... [more]
C71AS_ARATH8.814e-1339.18Putative cytochrome P450 71A28 OS=Arabidopsis thal... [more]
TCMO_POPTM2.565e-1236.46Trans-cinnamate 4-monooxygenase OS=Populus tremulo... [more]
TCMO_MEDSA2.565e-1236.46Trans-cinnamate 4-monooxygenase OS=Medicago sativa... [more]
C71AR_ARATH4.375e-1235.04Cytochrome P450 71A27 OS=Arabidopsis thaliana GN=C... [more]
CP17A_CAVPO9.746e-1239.39Steroid 17-alpha-hydroxylase/17,20 lyase OS=Cavia ... [more]
TCMO_RUTGR1.273e-1137.23Trans-cinnamate 4-monooxygenase OS=Ruta graveolens... [more]
CP2U1_BOVIN1.662e-1135.71Cytochrome P450 2U1 OS=Bos taurus GN=CYP2U1 PE=2 S... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAH1DE05RM2 PhII-IIIV1 Citrus clementina cDNA clone KN0AAH1DE05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC929067 ID=FC929067; Name=FC929067; organism=Citrus clementina; type=EST; length=602bp
AGAAAAGTGCGTTATCGATGGTTATCACATACCAGCTAAGACAACGGTTT
TCGTTAATGTGCTGGCAATAGGAAGGGACGGCCAAGTTTGGGATAAACCC
GACGAATTTATTCCTGAGAGATTTGTGGGCTCTAATATTGATATGGGAGG
GCAAAACTTTGAATTTATTCCATTTGGTGCCGGTAGAAGAATTTGTGCAG
GATCACCTATAGCAATGCCGATTGTGGAGCTTGCACTTGCCAATCTTCTT
TACAAATTTGATTGGAAAATGCCTCATGGAATGAAGATTGATGACTTGGA
CTTTGAGGCTACGCCTGGTCTTACCCAGCACAAGAAAAAGCCTCTCAAGC
TCGTGGCAACCAAATCTATATGATGGTTTAGTCATTAGTGTCGTGATTTA
AAATAAGTTTGCATGCAAGCACTTTTCTTTACGGTTATTGTTTGTTCGAG
GATCATAATATGTAACGGTGAGGGGTGCTACCCAGCTCTCTTTTAAAGCC
AAAGCTCATAATGCTTTTCTAGCTAGATTGCTTTTGCTTTTTGTTTCTTT
TAGTGATTTAATAAAATTTTAGCCCAATTGAAATCAAAAAAAAAAAAAAA
AA
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