FC929067

Overview
NameFC929067
Unique NameFC929067
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length602
Libraries
Library NameType
PhII-IIIV1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig15032 contig Ccv1_Contig15032:1..602. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC929067 vs. ExPASy Swiss-Prot
Match: CP2U1_HUMAN (Cytochrome P450 2U1 OS=Homo sapiens GN=CYP2U1 PE=1 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 2.171e-11
Identity = 35/98 (35.71%), Postives = 54/98 (55.10%), Query Frame = 2
Query:    2 EKCVIDGYHIPAKTTVFVNVLAIGRDGQVWDKPDEFIPERFVGSNIDMGGQNFE---FIPFGAGRRICAGSPIAMPIVELALANLLYKFDWKMPHGMK 286
            E  V+ GY IP  T +  N+ ++ RD  +W+KP++F P RF    +D  GQ  +   FIPFG G+R+C G  +A   + L   +L+  F + +P   K
Sbjct:  427 ENTVLQGYTIPKGTLILPNLWSVHRDPAIWEKPEDFYPNRF----LDDQGQLIKKETFIPFGIGKRVCMGEQLAKMELFLMFVSLMQSFAFALPEDSK 520          
BLAST of FC929067 vs. ExPASy Swiss-Prot
Match: CP2DE_BOVIN (Cytochrome P450 2D14 OS=Bos taurus GN=CYP2D14 PE=2 SV=2)

HSP 1 Score: 68.9366 bits (167), Expect = 2.171e-11
Identity = 35/89 (39.33%), Postives = 50/89 (56.18%), Query Frame = 2
Query:   14 IDGYHIPAKTTVFVNVLAIGRDGQVWDKPDEFIPERFVGSNIDMGGQNFEFIPFGAGRRICAGSPIAMPIVELALANLLYKFDWKMPHG 280
            + G+HIP  TT+  N+ ++ +D  VW+KP  F PE F+ +      Q   FIPF AGRR C G P+A   + L   +LL  F + +P G
Sbjct:  387 VQGFHIPKGTTLITNLSSVLKDETVWEKPFRFHPEHFLDAQGRFVKQE-AFIPFSAGRRACLGEPLARMELFLFFTSLLQHFSFSVPAG 474          
BLAST of FC929067 vs. ExPASy Swiss-Prot
Match: C77A2_SOLME (Cytochrome P450 77A2 OS=Solanum melongena GN=CYP77A2 PE=2 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 4.837e-11
Identity = 36/100 (36.00%), Postives = 51/100 (51.00%), Query Frame = 2
Query:    2 EKCVIDGYHIPAKTTVFVNVLAIGRDGQVWDKPDEFIPERFVGSNIDM---GGQNFEFIPFGAGRRICAGSPIAMPIVELALANLLYKFDWKMPHGMKID 292
            E   + GY IP    V + +  I  D  +W +P++F P+RF     D    G    + IPFG GRRIC G  +A   V L LA L+ +F+W  P   ++D
Sbjct:  389 EPAKLGGYDIPTGVNVEIFLPGISDDPNLWSEPEKFDPDRFYLGKEDADITGVSGVKMIPFGMGRRICPGLNMATVHVSLMLARLVQEFEWADPENTRVD 488          
BLAST of FC929067 vs. ExPASy Swiss-Prot
Match: C77A1_SOLME (Cytochrome P450 77A1 (Fragment) OS=Solanum melongena GN=CYP77A1 PE=2 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 4.837e-11
Identity = 42/119 (35.29%), Postives = 58/119 (48.74%), Query Frame = 2
Query:    2 EKCVIDGYHIPAKTTVFVNVLAIGRDGQVWDKPDEFIPERFVGSNIDM---GGQNFEFIPFGAGRRICAGSPIAMPIVELALANLLYKFDWKMPHGMKIDDLDFEATPGLTQHKKKPLK 349
            E   + GY IP  T V   V  I  D  VW  P++F P+RF+    D    G +  + +PFG GRRIC G  +A   V L LA ++ +F+W    G   + +DF      T   K PL+
Sbjct:  376 EPVKLAGYDIPMDTNVEFFVHGISHDPNVWSDPEKFDPDRFLSGREDADITGVKEVKMMPFGVGRRICPGLGMATVHVNLMLARMVQEFEWFAYPGN--NKVDFSEKLEFTVVMKNPLR 492          
BLAST of FC929067 vs. ExPASy Swiss-Prot
Match: C75AK_ARATH (Cytochrome P450 705A20 OS=Arabidopsis thaliana GN=CYP705A20 PE=1 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 4.837e-11
Identity = 39/116 (33.62%), Postives = 60/116 (51.72%), Query Frame = 2
Query:    8 CVIDGYHIPAKTTVFVNVLAIGRDGQVWDKPDEFIPERFVGSNIDMGGQNFEFIPFGAGRRICAGSPIAMPIVELALANLLYKFDWKMPHGMKIDDLDFEATPGLTQHKKKPLKLV 355
            C + G++I  KTT+ VN  A+ RD   W+ PDEF PERF+    +   +  + I FG+GRR C GS +A   +  A+  ++  FD      +K D +  +   GL      PL+ +
Sbjct:  384 CEMKGFYIAEKTTLVVNAYAVMRDPTTWEDPDEFKPERFLRQEEER--RALKHIAFGSGRRGCPGSNLATIFIGTAIGTMVQCFDL----SIKGDKVKMDEVGGLNLTMAHPLECI 493          
BLAST of FC929067 vs. ExPASy Swiss-Prot
Match: C508D_DICDI (Probable cytochrome P450 508D1 OS=Dictyostelium discoideum GN=cyp508d1 PE=3 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 4.837e-11
Identity = 36/110 (32.73%), Postives = 57/110 (51.82%), Query Frame = 2
Query:   11 VIDGYHIPAKTTVFVNVLAIGRDGQVWDKPDEFIPERFVGSNIDMGGQNFEFIPFGAGRRICAGSPIAMPIVELALANLLYKFDWKMPHGMKIDDLDFEATPGLTQHKKK 340
            ++ G+ IP  + V +N  ++GR+ + +  P +F P RF+GS  D       F+PFG G R C G  + M  + L L+N+   F     +G K+DD D+ +   L   K K
Sbjct:  373 IVKGHFIPKDSMVLINFYSLGRNPKDFPDPLKFDPNRFIGSTPD------SFMPFGTGPRNCIGQALGMDQIYLLLSNIFLNFKITSENGKKLDDTDYVSGLNLKPAKYK 476          
The following BLAST results are available for this feature:
BLAST of FC929067 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 146
Match NameE-valueIdentityDescription
CP2U1_HUMAN2.171e-1135.71Cytochrome P450 2U1 OS=Homo sapiens GN=CYP2U1 PE=1... [more]
CP2DE_BOVIN2.171e-1139.33Cytochrome P450 2D14 OS=Bos taurus GN=CYP2D14 PE=2... [more]
C77A2_SOLME4.837e-1136.00Cytochrome P450 77A2 OS=Solanum melongena GN=CYP77... [more]
C77A1_SOLME4.837e-1135.29Cytochrome P450 77A1 (Fragment) OS=Solanum melonge... [more]
C75AK_ARATH4.837e-1133.62Cytochrome P450 705A20 OS=Arabidopsis thaliana GN=... [more]
C508D_DICDI4.837e-1132.73Probable cytochrome P450 508D1 OS=Dictyostelium di... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAH1DE05RM2 PhII-IIIV1 Citrus clementina cDNA clone KN0AAH1DE05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC929067 ID=FC929067; Name=FC929067; organism=Citrus clementina; type=EST; length=602bp
AGAAAAGTGCGTTATCGATGGTTATCACATACCAGCTAAGACAACGGTTT
TCGTTAATGTGCTGGCAATAGGAAGGGACGGCCAAGTTTGGGATAAACCC
GACGAATTTATTCCTGAGAGATTTGTGGGCTCTAATATTGATATGGGAGG
GCAAAACTTTGAATTTATTCCATTTGGTGCCGGTAGAAGAATTTGTGCAG
GATCACCTATAGCAATGCCGATTGTGGAGCTTGCACTTGCCAATCTTCTT
TACAAATTTGATTGGAAAATGCCTCATGGAATGAAGATTGATGACTTGGA
CTTTGAGGCTACGCCTGGTCTTACCCAGCACAAGAAAAAGCCTCTCAAGC
TCGTGGCAACCAAATCTATATGATGGTTTAGTCATTAGTGTCGTGATTTA
AAATAAGTTTGCATGCAAGCACTTTTCTTTACGGTTATTGTTTGTTCGAG
GATCATAATATGTAACGGTGAGGGGTGCTACCCAGCTCTCTTTTAAAGCC
AAAGCTCATAATGCTTTTCTAGCTAGATTGCTTTTGCTTTTTGTTTCTTT
TAGTGATTTAATAAAATTTTAGCCCAATTGAAATCAAAAAAAAAAAAAAA
AA
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