FC929067

Overview
NameFC929067
Unique NameFC929067
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length602
Libraries
Library NameType
PhII-IIIV1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig15032 contig Ccv1_Contig15032:1..602. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC929067 vs. ExPASy Swiss-Prot
Match: C71BF_ARATH (Cytochrome P450 71B15 OS=Arabidopsis thaliana GN=CYP71B15 PE=2 SV=1)

HSP 1 Score: 110.923 bits (276), Expect = 4.982e-24
Identity = 48/84 (57.14%), Postives = 64/84 (76.19%), Query Frame = 2
Query:   14 IDGYHIPAKTTVFVNVLAIGRDGQVWDKPDEFIPERFVGSNIDMGGQNFEFIPFGAGRRICAGSPIAMPIVELALANLLYKFDW 265
            I GY +PAKT + VNV A+GRD ++W+  DEF P+RF+ S++D  G+N+EFIPFG+GRRIC G  +   +VE+AL NLLY FDW
Sbjct:  380 IQGYDVPAKTQILVNVYAMGRDPKLWENADEFNPDRFLDSSVDFKGKNYEFIPFGSGRRICPGMTMGTILVEMALLNLLYFFDW 463          
BLAST of FC929067 vs. ExPASy Swiss-Prot
Match: C80B1_ESCCA ((S)-N-methylcoclaurine 3'-hydroxylase isozyme 1 (Fragment) OS=Eschscholzia californica GN=CYP80B1 PE=2 SV=1)

HSP 1 Score: 110.538 bits (275), Expect = 6.507e-24
Identity = 54/118 (45.76%), Postives = 68/118 (57.63%), Query Frame = 2
Query:    2 EKCVIDGYHIPAKTTVFVNVLAIGRDGQVWDKPDEFIPERFVGSNIDMGGQNFEFIPFGAGRRICAGSPIAMPIVELALANLLYKFDWKMPHGMKIDDLDFEATPGLTQHKKKPLKLV 355
            E C I  Y IP    + VN   IGRD + W  P  F PERF+ S++D  G +F  IPFGAGRRIC G PIA   + L +A  +   DW +P+GM +D L  E   GLT  K+ PL +V
Sbjct:  365 ETCTILNYTIPKDCQIMVNAWGIGRDPKTWTDPLTFSPERFLNSSVDFRGNDFSLIPFGAGRRICPGLPIANQFIALLVATFVQNLDWCLPNGMSVDHLIVEEKFGLTLQKEPPLFIV 482          
BLAST of FC929067 vs. ExPASy Swiss-Prot
Match: C71B3_ARATH (Cytochrome P450 71B3 OS=Arabidopsis thaliana GN=CYP71B3 PE=2 SV=2)

HSP 1 Score: 110.153 bits (274), Expect = 8.498e-24
Identity = 54/114 (47.37%), Postives = 72/114 (63.16%), Query Frame = 2
Query:   14 IDGYHIPAKTTVFVNVLAIGRDGQVWDKPDEFIPERFVGSNIDMGGQNFEFIPFGAGRRICAGSPIAMPIVELALANLLYKFDWKMPHGMKIDDLDFEATPGLTQHKKKPLKLV 355
            I GY IP KT + VN  +IGR+ ++W+ P+EF PERF+   +D  G +FE +PFG+GR+IC G    +  VEL L NLLY FDW++    K  D+D E     T  KK PL+LV
Sbjct:  385 IQGYDIPRKTILLVNAWSIGRNPELWENPEEFNPERFIDCPMDYKGNSFEMLPFGSGRKICPGIAFGIATVELGLLNLLYYFDWRLAEEDK--DIDMEEAGDATIVKKVPLELV 496          
BLAST of FC929067 vs. ExPASy Swiss-Prot
Match: C80B2_ESCCA ((S)-N-methylcoclaurine 3'-hydroxylase isozyme 2 OS=Eschscholzia californica GN=CYP80B2 PE=2 SV=1)

HSP 1 Score: 109.768 bits (273), Expect = 1.110e-23
Identity = 54/118 (45.76%), Postives = 68/118 (57.63%), Query Frame = 2
Query:    2 EKCVIDGYHIPAKTTVFVNVLAIGRDGQVWDKPDEFIPERFVGSNIDMGGQNFEFIPFGAGRRICAGSPIAMPIVELALANLLYKFDWKMPHGMKIDDLDFEATPGLTQHKKKPLKLV 355
            E C I  Y IP    + VN   IGRD + W  P  F PERF+ S++D  G +F  IPFGAGRRIC G PIA   + L +A  +   DW +P+GM +D L  E   GLT  K+ PL +V
Sbjct:  366 ETCTILNYTIPKDCQIMVNAWGIGRDPKTWIDPLTFSPERFLNSSVDFRGNDFSLIPFGAGRRICPGLPIANQFIALLVATFVQNLDWCLPNGMSVDHLIVEEKFGLTLQKEPPLFIV 483          
BLAST of FC929067 vs. ExPASy Swiss-Prot
Match: C84A1_ARATH (Cytochrome P450 84A1 OS=Arabidopsis thaliana GN=CYP84A1 PE=2 SV=1)

HSP 1 Score: 109.383 bits (272), Expect = 1.450e-23
Identity = 56/121 (46.28%), Postives = 72/121 (59.50%), Query Frame = 2
Query:    2 EKCVIDGYHIPAKTTVFVNVLAIGRDGQVWDKPDEFIPERFVGSNI-DMGGQNFEFIPFGAGRRICAGSPIAMPIVELALANLLYKFDWKMPHGMKIDDLDFEATPGLTQHKKKPLKLVAT 361
            E   IDG+ IP K+ V +N  AIGRD   W  PD F P RF+   + D  G NFEFIPFG+GRR C G  + +  ++LA+A++L+ F WK+P GMK  +LD     GLT  K   L  V T
Sbjct:  393 EDTSIDGFFIPKKSRVMINAFAIGRDPTSWTDPDTFRPSRFLEPGVPDFKGSNFEFIPFGSGRRSCPGMQLGLYALDLAVAHILHCFTWKLPDGMKPSELDMNDVFGLTAPKATRLFAVPT 513          
BLAST of FC929067 vs. ExPASy Swiss-Prot
Match: C98A1_SORBI (Cytochrome P450 98A1 OS=Sorghum bicolor GN=CYP98A1 PE=2 SV=1)

HSP 1 Score: 108.997 bits (271), Expect = 1.893e-23
Identity = 49/115 (42.61%), Postives = 72/115 (62.61%), Query Frame = 2
Query:   14 IDGYHIPAKTTVFVNVLAIGRDGQVWDKPDEFIPERFVGSNIDMGGQNFEFIPFGAGRRICAGSPIAMPIVELALANLLYKFDWKMPHGMKIDDLDFEATPGLTQHKKKPLKLVA 358
            I GY IP    V VNV A+ RD +VW  P E+ PERF+  NID+ G +F  +PFGAGRR+C G+ + + +V   + +LL+ F+W +P G + +D++   +PGL      PL+ VA
Sbjct:  381 IGGYDIPKGANVMVNVWAVARDPKVWSNPLEYRPERFLEENIDIKGSDFRVLPFGAGRRVCPGAQLGINLVASMIGHLLHHFEWSLPEGTRPEDVNMMESPGLVTFMGTPLQAVA 495          
BLAST of FC929067 vs. ExPASy Swiss-Prot
Match: C99A2_ORYSJ (Cytochrome P450 99A2 OS=Oryza sativa subsp. japonica GN=CYP99A2 PE=2 SV=2)

HSP 1 Score: 108.227 bits (269), Expect = 3.229e-23
Identity = 52/120 (43.33%), Postives = 69/120 (57.50%), Query Frame = 2
Query:    2 EKCVIDGYHIPAKTTVFVNVLAIGRDGQVWDKPDEFIPERFVGSNIDMGGQNFEFIPFGAGRRICAGSPIAMPIVELALANLLYKFDWKMPHGMKIDDLDFEATPGLTQHKKKPLKLVAT 361
            E C I GY +   T V +N  A+ R  + WD  +EF PERF     D  G  FE++PFG GRR C G    M ++EL +A LLY FDW +P GM+ DD+D +     T  +K  L+LVA+
Sbjct:  404 ETCDIGGYEVVEGTRVVINSWAMARSPEYWDDAEEFKPERFEDGMADYKGSRFEYLPFGTGRRRCPGDTFGMVLLELIVARLLYYFDWSLPAGMQPDDVDMDFVVTATTRRKNHLQLVAS 523          
BLAST of FC929067 vs. ExPASy Swiss-Prot
Match: C71AP_ARATH (Cytochrome P450 71A25 OS=Arabidopsis thaliana GN=CYP71A25 PE=2 SV=1)

HSP 1 Score: 107.457 bits (267), Expect = 5.508e-23
Identity = 53/114 (46.49%), Postives = 72/114 (63.16%), Query Frame = 2
Query:   23 YHIPAKTTVFVNVLAIGRDGQVWDKP-DEFIPERFVGSNIDMGGQNFEFIPFGAGRRICAGSPIAMPIVELALANLLYKFDWKMPHGMKIDDLDFEATPGLTQHKKKPLKLVAT 361
            YHIPA T V +N  AIGR+   W    +EF PER + +++D  GQNFE +PFGAGRRIC     A+ + E+ LANL++ FDWK+P   K D  D   + G + H++ PL  VA+
Sbjct:  373 YHIPAGTQVMMNAWAIGREVATWGPDAEEFKPERHLDTSVDFRGQNFELLPFGAGRRICPAVSFAVVLNEVVLANLVHGFDWKLPEESKEDKTDVAESSGFSVHREFPLYAVAS 486          
BLAST of FC929067 vs. ExPASy Swiss-Prot
Match: C71AL_ARATH (Cytochrome P450 71A21 OS=Arabidopsis thaliana GN=CYP71A21 PE=2 SV=1)

HSP 1 Score: 107.071 bits (266), Expect = 7.194e-23
Identity = 49/120 (40.83%), Postives = 74/120 (61.67%), Query Frame = 2
Query:   11 VIDGYHIPAKTTVFVNVLAIGRDGQVWDKPDE-FIPERFVGSNIDMGGQNFEFIPFGAGRRICAGSPIAMPIVELALANLLYKFDWKMPHGMKIDDLDFEATPGLTQHKKKPLKLVATKS 367
            ++  YHIPA T V +N  AIGR+   W    E F PER + S++D  G NFE +PFGAGRRIC     A+ ++E+ALAN ++++DWK+P   K +  +   + G+  H+  PL  +A+ +
Sbjct:  370 ILGDYHIPAGTQVMINAWAIGREAATWGPDAEKFRPERHLDSSVDFRGHNFELVPFGAGRRICPAISFAVVLIEVALANFVHRYDWKLPEDSKENQTNVAESTGMVIHRLFPLYAIASST 489          
BLAST of FC929067 vs. ExPASy Swiss-Prot
Match: C98A2_SOYBN (Cytochrome P450 98A2 OS=Glycine max GN=CYP98A2 PE=2 SV=1)

HSP 1 Score: 106.686 bits (265), Expect = 9.396e-23
Identity = 47/116 (40.52%), Postives = 71/116 (61.21%), Query Frame = 2
Query:   14 IDGYHIPAKTTVFVNVLAIGRDGQVWDKPDEFIPERFVGSNIDMGGQNFEFIPFGAGRRICAGSPIAMPIVELALANLLYKFDWKMPHGMKIDDLDFEATPGLTQHKKKPLKLVAT 361
            + GY IP  + V VNV A+ RD  VW  P EF PERF+  ++DM G +F  +PFG+GRR+C G+ + + +    L +LL+ F W  P GMK +++D    PGL  + + P++ V +
Sbjct:  379 VGGYDIPKGSNVHVNVWAVARDPAVWKDPLEFRPERFLEEDVDMKGHDFRLLPFGSGRRVCPGAQLGINLAASMLGHLLHHFCWTPPEGMKPEEIDMGENPGLVTYMRTPIQAVVS 494          
The following BLAST results are available for this feature:
BLAST of FC929067 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 146
Match NameE-valueIdentityDescription
C71BF_ARATH4.982e-2457.14Cytochrome P450 71B15 OS=Arabidopsis thaliana GN=C... [more]
C80B1_ESCCA6.507e-2445.76(S)-N-methylcoclaurine 3'-hydroxylase isozyme 1 (F... [more]
C71B3_ARATH8.498e-2447.37Cytochrome P450 71B3 OS=Arabidopsis thaliana GN=CY... [more]
C80B2_ESCCA1.110e-2345.76(S)-N-methylcoclaurine 3'-hydroxylase isozyme 2 OS... [more]
C84A1_ARATH1.450e-2346.28Cytochrome P450 84A1 OS=Arabidopsis thaliana GN=CY... [more]
C98A1_SORBI1.893e-2342.61Cytochrome P450 98A1 OS=Sorghum bicolor GN=CYP98A1... [more]
C99A2_ORYSJ3.229e-2343.33Cytochrome P450 99A2 OS=Oryza sativa subsp. japoni... [more]
C71AP_ARATH5.508e-2346.49Cytochrome P450 71A25 OS=Arabidopsis thaliana GN=C... [more]
C71AL_ARATH7.194e-2340.83Cytochrome P450 71A21 OS=Arabidopsis thaliana GN=C... [more]
C98A2_SOYBN9.396e-2340.52Cytochrome P450 98A2 OS=Glycine max GN=CYP98A2 PE=... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAH1DE05RM2 PhII-IIIV1 Citrus clementina cDNA clone KN0AAH1DE05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC929067 ID=FC929067; Name=FC929067; organism=Citrus clementina; type=EST; length=602bp
AGAAAAGTGCGTTATCGATGGTTATCACATACCAGCTAAGACAACGGTTT
TCGTTAATGTGCTGGCAATAGGAAGGGACGGCCAAGTTTGGGATAAACCC
GACGAATTTATTCCTGAGAGATTTGTGGGCTCTAATATTGATATGGGAGG
GCAAAACTTTGAATTTATTCCATTTGGTGCCGGTAGAAGAATTTGTGCAG
GATCACCTATAGCAATGCCGATTGTGGAGCTTGCACTTGCCAATCTTCTT
TACAAATTTGATTGGAAAATGCCTCATGGAATGAAGATTGATGACTTGGA
CTTTGAGGCTACGCCTGGTCTTACCCAGCACAAGAAAAAGCCTCTCAAGC
TCGTGGCAACCAAATCTATATGATGGTTTAGTCATTAGTGTCGTGATTTA
AAATAAGTTTGCATGCAAGCACTTTTCTTTACGGTTATTGTTTGTTCGAG
GATCATAATATGTAACGGTGAGGGGTGCTACCCAGCTCTCTTTTAAAGCC
AAAGCTCATAATGCTTTTCTAGCTAGATTGCTTTTGCTTTTTGTTTCTTT
TAGTGATTTAATAAAATTTTAGCCCAATTGAAATCAAAAAAAAAAAAAAA
AA
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