FC929071

Overview
NameFC929071
Unique NameFC929071
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length863
Libraries
Library NameType
PhII-IIIV1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC929071 vs. ExPASy Swiss-Prot
Match: CCPR_CANAL (Cytochrome c peroxidase, mitochondrial OS=Candida albicans GN=CCP1 PE=3 SV=1)

HSP 1 Score: 132.109 bits (331), Expect = 3.929e-30
Identity = 67/160 (41.88%), Postives = 98/160 (61.25%), Query Frame = 1
Query:  169 MLRIAWHSAGTYDVKTKTGGPFG-TMRLAAEQAHSANNGLDIAVRLLEPFKEQFPTISYADLYQLAGVVGVEVTGGPDIPFHPGRDDK---AEPPQEGRLPDAKQGNDHLRQVFGAQMGLSDKDIVALSGGHTLGRCHKERSGFEGPWTRNPLIFDNSYF 636
            +LR+AWH++GTYD    +GG +G TM  A E+    N GL +    L  F  ++P IS  DL+ L GV  V+ +GGP I + PGR D    ++ P  GRLPDA +   +++ +F A+MG ++++ VAL G H LGRCHK  SG++GPW  +   F N ++
Sbjct:  117 LLRLAWHTSGTYDKSDNSGGSYGGTMIFAPEEFDPENAGLQVGREFLMEFLVKYPWISRGDLWTLGGVAAVQESGGPKIEWRPGRVDDNTASKVPPNGRLPDASKDGKYVKDLF-ARMGFNERETVALLGAHVLGRCHKHNSGYDGPWGPSFNQFTNVFY 275          
BLAST of FC929071 vs. ExPASy Swiss-Prot
Match: APX6_ARATH (Putative L-ascorbate peroxidase 6 OS=Arabidopsis thaliana GN=APX6 PE=2 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 4.506e-18
Identity = 62/190 (32.63%), Postives = 98/190 (51.58%), Query Frame = 1
Query:   76 YPTVSEDYKKAVEKCKRKLRGFIAEKNCAPLMLRIAWHSAGTYDVKTKTGGPFGTMRLAAEQAHSANNGLDIAVRLLEPFK---EQFPTISYADLYQLAGVVGVEVTGGPDIPFHPGRDDKAEPPQEGRLPDAKQGNDHLRQVFGAQMGLSDKDIVALSGGHTLGRCHKERSGFEGPWTRNPLIFDNSYF 636
            YP +  + +K V K K            A  +LR+ +H AGT+++   +GG  G+  +A E     N GL  ++++L   K   ++   +S+AD+  +AG   V + GGP IP   GR D A+P  EG+LP        L++ F  + G S +++VALSG HT+G       GF      +P +FDN+Y+
Sbjct:   98 YPVMQNEIRKVVTKGK------------AAGVLRLVFHDAGTFELDDHSGGINGS--IAYELERPENIGLKKSLKVLAKAKVKVDEIQPVSWADMISVAGSEAVSICGGPTIPVVLGRLDSAQPDPEGKLPPETLSASGLKECF-KRKGFSTQELVALSGAHTIG-----SKGF-----GDPTVFDNAYY 262          
BLAST of FC929071 vs. ExPASy Swiss-Prot
Match: KATG_ERYLH (Catalase-peroxidase OS=Erythrobacter litoralis (strain HTCC2594) GN=katG PE=3 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 2.921e-17
Identity = 74/241 (30.71%), Postives = 97/241 (40.25%), Query Frame = 1
Query:  163 PLMLRIAWHSAGTYDVKTKTGGPF-GTMRLAAEQAHSANNGLDIAVRLLEPFKEQFPT-ISYADLYQLAGVVGVEVTGGPDIPFHPGRDDKAEP---------------------PQEGRL----------------PDAKQGNDH--------LRQVFGAQMGLSDKDIVAL-SGGHTLGRCHKER-----------------------------------SGFEGPWTRNPLIFDNSYF 636
            P  +R+AWH+AGTY      GG   G  R A   +   N  LD A RLL P K+++   IS+ADL+ L G V +E  GGP   F  GR D  EP                     P EGR                 P+   G+ H        +R+ F A+M ++D++ VAL +GGH  G+CH  +                                   SG EGPWT NP  + N YF
Sbjct:   95 PFFIRMAWHAAGTYRTGDGRGGSSSGQQRFAPLNSWPDNGNLDKARRLLWPIKQKYGKHISWADLFILTGNVAIESMGGPVFGFGGGRKDVYEPEMVYWGTEEQWVDTGAETRIHPDEGRALENPLAAIQMGLIYVNPEGPGGDPHDPEGMARDMRETF-ARMAMNDEETVALTAGGHAFGKCHGAKPADTFGTAPEGENLHLMGMGWLTDEEEIRNGHVTTSGIEGPWTPNPTQWGNDYF 334          
BLAST of FC929071 vs. ExPASy Swiss-Prot
Match: KATG_GEOKA (Catalase-peroxidase OS=Geobacillus kaustophilus GN=katG PE=3 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 3.229e-16
Identity = 74/236 (31.36%), Postives = 97/236 (41.10%), Query Frame = 1
Query:  163 PLMLRIAWHSAGTYDVKT-KTGGPFGTMRLAAEQAHSANNGLDIAVRLLEPFKEQFPT-ISYADLYQLAGVVGVEVTGGPDIPFHPGRDDKAEPPQE----------------------------------------GRLPDAKQGNDHLRQVFGAQMGLSDKDIVAL-SGGHTLGRCH-------------------------------KER----SGFEGPWTRNPLIFDNSYF 636
            PL +R+AWHSAGTY +   + GG  GT R A   +   N  LD A RLL P K+++   IS+ADL  LAG V +E  GG  I F  GR+D   P ++                                           PD       +R+ F  +MG++D++ VAL +GGHT G+ H                               K R    SG EG WT  P  +DNSYF
Sbjct:   93 PLFIRMAWHSAGTYRIGDGRGGGSTGTQRFAPLNSWPDNANLDKARRLLWPIKKKYGNKISWADLMILAGNVAIESMGGKTIGFGGGREDVWHPEEDIYWGAEKEWLASERYSGDRELENPLAAVQMGLIYVNPEGPDGKPDPVAAARDIRETF-RRMGMNDEETVALIAGGHTFGKAHGAGPASHVGPEPEAAPIEAQGLGWISSYGKGKGRDTITSGIEGAWTPTPTQWDNSYF 327          
BLAST of FC929071 vs. ExPASy Swiss-Prot
Match: KATG_BACHD (Catalase-peroxidase OS=Bacillus halodurans GN=katG PE=3 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 3.229e-16
Identity = 71/237 (29.96%), Postives = 98/237 (41.35%), Query Frame = 1
Query:  163 PLMLRIAWHSAGTYDVKT-KTGGPFGTMRLAAEQAHSANNGLDIAVRLLEPFKEQFPT-ISYADLYQLAGVVGVEVTGGPDIPFHPGRDDKAEPPQE-----------------------------------------GRLPDAKQGNDHLRQVFGAQMGLSDKDIVAL-SGGHTLGRCH-------------------------------KER----SGFEGPWTRNPLIFDNSYF 636
            P  +R++WH+AGTY +   + GG  G  R A   +   N  LD A RLL P K+++   IS+ADL  LAG V +E  GGP I F  GR+D   P ++                                            PD  +    +R+ FG +MG++D++ VAL +GGHT G+ H                               K R    SG EG WT NP  +DN +F
Sbjct:   91 PFFIRMSWHAAGTYRIGDGRGGGGTGNQRFAPLNSWPDNGNLDKARRLLWPIKQKYGNKISWADLLVLAGNVAIEDMGGPVIGFGAGREDIWHPEEDIYWGSEKEWLTGDKRYSGDRELENPLAAVEMGLIYVNPEGPDGKPDPIKAAHDIRETFG-RMGMNDEETVALIAGGHTFGKAHGAGNPDHVGPEPEAAPIEAQGLGWQNTYGSGKGRDTITSGLEGAWTANPTQWDNGFF 326          
BLAST of FC929071 vs. ExPASy Swiss-Prot
Match: KATG_GEOTN (Catalase-peroxidase OS=Geobacillus thermodenitrificans (strain NG80-2) GN=katG PE=3 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 5.508e-16
Identity = 74/236 (31.36%), Postives = 96/236 (40.68%), Query Frame = 1
Query:  163 PLMLRIAWHSAGTYDVKTKTGGPF-GTMRLAAEQAHSANNGLDIAVRLLEPFKEQFPT-ISYADLYQLAGVVGVEVTGGPDIPFHPGRDDKAEPPQ------------------EGRL----------------------PDAKQGNDHLRQVFGAQMGLSDKDIVAL-SGGHTLGRCHKE-----------------------------------RSGFEGPWTRNPLIFDNSYF 636
            PL +R+AWHSAGTY +    GG   GT R A   +   N  LD A RLL P K+++   IS+ADL+ LAG V +E  GG  I F  GR D   P +                  +G L                      PD K     +R+ F  +MG++D++ VAL +GGHT G+ H                                      SG EG WT  P  +D SYF
Sbjct:   93 PLFIRMAWHSAGTYRIGDGRGGASTGTQRFAPLNSWPDNANLDKARRLLWPIKKKYGNKISWADLFILAGNVAIESMGGKTIGFGGGRVDVWHPEEDIYWGAEKEWLASERHSDDGELEHPLAASVMGLIYVNPEGPDGKPDPKAAARDIRETF-RRMGMNDEETVALIAGGHTFGKAHGAGPATHVGPEPEAAPIEAQGLGWMSSYGKGKGSDTITSGIEGAWTPTPTQWDMSYF 327          
BLAST of FC929071 vs. ExPASy Swiss-Prot
Match: KATG_SACD2 (Catalase-peroxidase OS=Saccharophagus degradans (strain 2-40 / ATCC 43961 / DSM 17024) GN=katG PE=3 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 9.395e-16
Identity = 62/178 (34.83%), Postives = 89/178 (50.00%), Query Frame = 1
Query:  163 PLMLRIAWHSAGTYDVKTKTGGPFGTM-RLAAEQAHSANNGLDIAVRLLEPFKEQFPT-ISYADLYQLAGVVGVEVTGGPDIPFHPGRDDKAEPPQ-----EGRL---------------------------PDAKQGN-------DHLRQVFGAQMGLSDKDIVAL-SGGHTLGRCH 570
            P  +R++WH+AGTY +    GG  G M R A   +   N  LD A RLL+P K+++   +S++DL  LAG +G+E  G P + F  GRDD+ EP +     EG+                            P+   GN         +RQ FG +MG+SD++ VAL +GGHT G+ H
Sbjct:   97 PFFIRLSWHAAGTYRMIDGRGGADGGMQRFAPLNSWPDNASLDKARRLLQPIKQKYGNNLSWSDLLVLAGTIGMEDMGFPIVGFAFGRDDEWEPEEVNWGPEGQWLTDRRHSGDRKLDKPFGATEMGLIYVNPEGPHGNPDPIAAAHDIRQAFG-RMGMSDEETVALIAGGHTFGKAH 273          
BLAST of FC929071 vs. ExPASy Swiss-Prot
Match: KATG_BACST (Catalase-peroxidase OS=Bacillus stearothermophilus GN=katG PE=1 SV=2)

HSP 1 Score: 84.3445 bits (207), Expect = 9.395e-16
Identity = 72/236 (30.51%), Postives = 94/236 (39.83%), Query Frame = 1
Query:  163 PLMLRIAWHSAGTYDVKTKTGGPF-GTMRLAAEQAHSANNGLDIAVRLLEPFKEQFPT-ISYADLYQLAGVVGVEVTGGPDIPFHPGRDDKAEPPQE----------------------------------------GRLPDAKQGNDHLRQVFGAQMGLSDKDIVAL-SGGHTLGRCHKE-----------------------------------RSGFEGPWTRNPLIFDNSYF 636
            PL +R+AWHSAGTY +    GG   GT R A   +   N  LD A RLL P K+++   IS+ADL+ LAG V +E  GG  I F  GR D   P ++                                           PD K     +R+ F  +MG++D++ VAL +GGHT G+ H                                      SG EG WT  P  +D SYF
Sbjct:   93 PLFIRMAWHSAGTYRIGDGRGGASTGTQRFAPLNSWPDNANLDKARRLLWPIKKKYGNKISWADLFILAGNVAIESMGGKTIGFGGGRVDVWHPEEDVYWGSEKEWLASERYSGDRELENPLAAVQMGLIYVNPEGPDGKPDPKAAARDIRETF-RRMGMNDEETVALIAGGHTFGKAHGAGPATHVGPEPEAAPIEAQGLGWISSYGKGKGSDTITSGIEGAWTPTPTQWDTSYF 327          
BLAST of FC929071 vs. ExPASy Swiss-Prot
Match: KATG_SYMTH (Catalase-peroxidase OS=Symbiobacterium thermophilum GN=katG PE=3 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 3.022e-14
Identity = 61/179 (34.08%), Postives = 84/179 (46.93%), Query Frame = 1
Query:  163 PLMLRIAWHSAGTYDVKTKTGG-PFGTMRLAAEQAHSANNGLDIAVRLLEPFKEQF-PTISYADLYQLAGVVGVEVTGGPDIPFHPGRDDKAEPPQE----------------------------------------GRLPDAKQGNDHLRQVFGAQMGLSDKDIVAL-SGGHTLGRCH 570
            PL++R+AWHSAGTY ++   GG   G  R A   +   N  LD A RLL P K+++   IS+ADL  LAG V +E  G   I F  GR D  EP ++                                        GR PD  +    +R+ F  +MG++D++ VAL +GGHT G+ H
Sbjct:   81 PLIIRMAWHSAGTYRIQDGRGGAESGAQRFAPLNSWPDNINLDKARRLLWPIKQKYGRRISWADLMILAGNVALESMGLKTIGFAGGRADVWEPEEDIYWGSEQQWLGRDRFGEEGKLEDPLAASEMGLIYVNPEGPGREPDPLKAAQQIRETF-KRMGMNDEETVALIAGGHTFGKTH 258          
BLAST of FC929071 vs. ExPASy Swiss-Prot
Match: KATG_SPHAL (Catalase-peroxidase OS=Sphingopyxis alaskensis GN=katG PE=3 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 5.155e-14
Identity = 71/244 (29.10%), Postives = 95/244 (38.93%), Query Frame = 1
Query:  163 PLMLRIAWHSAGTYDVKTKTGGP-FGTMRLAAEQAHSANNGLDIAVRLLEPFKEQFPT-ISYADLYQLAGVVGVEVTGGPDIPFHPGRDDKAEPPQ----------------------------EGRL-----------PDAKQGNDH--------LRQVFGAQMGLSDKDIVAL-SGGHTLGRCHKE------------------------------------RSGFEGPWTRNPLIFDNSYF 636
            P  +R+AWH+AGTY      GG   G  R A   +   N  LD A RLL P K+++   IS+ADL+ LAG V +E  GGP   F  GR D  EP +                            EG L           P+  QGN H        +++ F  +M ++D++ VAL +GGHT G+ H                                       SG EG WT  P  +  +YF
Sbjct:   91 PFFIRMAWHAAGTYRTADGRGGANSGQQRFAPLDSWPDNGNLDKARRLLWPIKQKYGNKISWADLFILAGNVAIESMGGPVFGFGGGRVDVYEPERDIYWGSEDKWVNQGVQTRIDPAKGMETIEGPLAAIQMGLIYVNPEGPQGNPHDDEGMARDMKETF-KRMAMNDEETVALTAGGHTFGKAHGNGDPSLLGPAPAGSDLAAQGFGWVSSHESGGIGEHAVTSGIEGAWTNTPREWTENYF 333          
The following BLAST results are available for this feature:
BLAST of FC929071 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 82
Match NameE-valueIdentityDescription
CCPR_CANAL3.929e-3041.88Cytochrome c peroxidase, mitochondrial OS=Candida ... [more]
APX6_ARATH4.506e-1832.63Putative L-ascorbate peroxidase 6 OS=Arabidopsis t... [more]
KATG_ERYLH2.921e-1730.71Catalase-peroxidase OS=Erythrobacter litoralis (st... [more]
KATG_GEOKA3.229e-1631.36Catalase-peroxidase OS=Geobacillus kaustophilus GN... [more]
KATG_BACHD3.229e-1629.96Catalase-peroxidase OS=Bacillus halodurans GN=katG... [more]
KATG_GEOTN5.508e-1631.36Catalase-peroxidase OS=Geobacillus thermodenitrifi... [more]
KATG_SACD29.395e-1634.83Catalase-peroxidase OS=Saccharophagus degradans (s... [more]
KATG_BACST9.395e-1630.51Catalase-peroxidase OS=Bacillus stearothermophilus... [more]
KATG_SYMTH3.022e-1434.08Catalase-peroxidase OS=Symbiobacterium thermophilu... [more]
KATG_SPHAL5.155e-1429.10Catalase-peroxidase OS=Sphingopyxis alaskensis GN=... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAH1DE10RM2 PhII-IIIV1 Citrus clementina cDNA clone KN0AAH1DE10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC929071 ID=FC929071; Name=FC929071; organism=Citrus clementina; type=EST; length=863bp
GGCACGAGGCTCGTTTGTTAAGGATTTGCGTCTCTCTTTCTCATTTCATT
CAGCGTTGAAAAGATGACGAAGAATTACCCCACTGTTAGCGAGGATTACA
AGAAGGCCGTGGAGAAATGCAAGAGGAAGCTCAGAGGCTTCATCGCTGAG
AAGAACTGCGCTCCACTCATGCTCCGTATCGCGTGGCACTCAGCTGGTAC
ATATGATGTGAAGACCAAGACCGGAGGTCCATTCGGAACCATGAGGCTCG
CTGCTGAGCAGGCACACTCAGCCAACAACGGCCTCGATATTGCCGTTAGG
CTTTTGGAGCCGTTCAAGGAGCAGTTCCCTACCATCTCCTACGCTGACCT
TTATCAGCTTGCTGGTGTTGTTGGCGTTGAGGTTACCGGTGGGCCCGATA
TCCCCTTCCACCCGGGAAGAGATGACAAGGCTGAGCCACCTCAAGAAGGC
CGGCTTCCTGATGCTAAACAGGGTAATGATCACTTGAGGCAAGTCTTTGG
TGCTCAGATGGGCCTCAGCGACAAGGATATTGTTGCTCTCTCTGGTGGCC
ACACCCTGGGAAGGTGCCACAAGGAGAGGTCTGGATTTGAGGGACCATGG
ACCCGCAACCCTCTCATTTTTGACAATTCCTACTTCACGGAGCTCTTGAC
TGGTGAGAANGATGGTCTTCTGCAATTGCCATCCGACAAGGCCCTTCTGG
ATGACCCTGTTTTCCGCCCTCTTGTTGAGAAATATGCTGCGGATGAAGAC
GCTTTCTTCGCTGATTATGCTGAGGCTCATCTCAAGCTCTCTGAGCTAGG
ATTTGCTGAAGCCTAAATTTACCTGAGTAATAAATGGGTTGGAATGATGC
CCACAACAGTGTG
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