FC929073

Overview
NameFC929073
Unique NameFC929073
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length395
Libraries
Library NameType
PhII-IIIV1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of FC929073 vs. ExPASy Swiss-Prot
Match: AMHX_BACSU (Amidohydrolase amhX OS=Bacillus subtilis GN=amhX PE=3 SV=3)

HSP 1 Score: 68.9366 bits (167), Expect = 8.776e-12
Identity = 40/110 (36.36%), Postives = 59/110 (53.64%), Query Frame = 1 
Query:    1 VTMLLGAAKILQEHREELKGTVVLVFQPAEEGGGGAHKVLEAGVLEKVNAIFGLHVDPNLPIGEVASRPGPLLAGSGFFEAVIGGKGGHAAIPQHSIDPILAASNVIVSL 330
            +TM LG   +L++  E  KGT+  +FQPAEE GGGA K++E GVL+ ++ ++G+HV P          P  L   S   E  I G+  H A P    + I  A+ ++  L
Sbjct:   96 MTMALGTLMLLKKQPELPKGTIRFIFQPAEEKGGGALKMIEEGVLDDIDYLYGVHVRPIQETQNGRCAPSILHGSSQHIEGTIIGEEAHGARPHLGKNSIEIAAFLVHKL 205
The following BLAST results are available for this feature:
BLAST of FC929073 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 101
Match NameE-valueIdentityDescription
AMHX_BACSU8.776e-1236.36Amidohydrolase amhX OS=Bacillus subtilis GN=amhX P... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAH1DE12RM2 PhII-IIIV1 Citrus clementina cDNA clone KN0AAH1DE12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC929073 ID=FC929073; Name=FC929073; organism=Citrus clementina; type=EST; length=395bp
GTCACCATGCTTCTAGGTGCAGCAAAAATTCTTCAAGAGCACCGTGAGGA
GTTAAAGGGTACAGTTGTTCTGGTTTTCCAACCAGCCGAAGAAGGAGGTG
GAGGAGCCCACAAAGTGCTCGAAGCAGGAGTCCTGGAAAAAGTTAATGCC
ATATTTGGGTTACATGTCGACCCTAACTTACCCATAGGTGAAGTAGCTTC
AAGACCTGGTCCTCTGTTAGCTGGGAGTGGCTTCTTTGAAGCAGTAATAG
GTGGAAAAGGAGGTCATGCGGCCATTCCTCAGCATTCAATAGATCCAATA
TTGGCAGCTTCTAATGTGATTGTTAGTTTACAACATCTTGTTTCTCGTGA
AGCTGATCCACTTGATTCACANGTCGTGACAGTTGCAAAATTTCA
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